Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g36746 Brassica carinata HOM05D001038 ORTHO05D010763 1.8e-142 509.2 258 100.0
BolC9t58942H Brassica oleracea HOM05D001038 ORTHO05D010763 6.9e-57 224.9 269 50.9
BolC7t40492H Brassica oleracea HOM05D001038 ORTHO05D010763 7.6e-56 221.5 154 76.0
BcaC06g35698 Brassica carinata HOM05D001038 ORTHO05D031981 1.8e-20 104.0 183 39.9
BcaB08g35144 Brassica carinata HOM05D001038 ORTHO05D021599 2.6e-19 100.1 113 50.4
C07p11920 Brassica napus HOM05D001038 ORTHO05D031981 5.7e-19 99.0 179 39.1
C06p18900 Brassica napus HOM05D001038 ORTHO05D016716 2.8e-18 96.7 109 50.5
BcaC08g44444 Brassica carinata HOM05D001038 ORTHO05D016716 8.2e-18 95.1 104 51.0
BraA08t34217Z Brassica rapa HOM05D001038 ORTHO05D016716 1.4e-17 94.4 75 62.7
BcaB07g32567 Brassica carinata HOM05D001038 ORTHO05D010763 3.1e-17 93.2 105 50.5
BcaC05g28787 Brassica carinata HOM05D001038 ORTHO05D016716 4.1e-17 92.8 104 51.0
BcaC08g46990 Brassica carinata HOM05D025413 ORTHO05D021599 1.2e-16 91.3 107 47.7
BcaC05g27690 Brassica carinata HOM05D001038 ORTHO05D016716 2.7e-16 90.1 75 60.0
BcaC08g44142 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-15 87.8 124 45.2
BolC5t32403H Brassica oleracea HOM05D001038 ORTHO05D016716 2.9e-15 86.7 70 61.4
BcaC03g15830 Brassica carinata HOM05D001038 ORTHO05D016716 5.0e-15 85.9 97 53.6
BraA10t43039Z Brassica rapa HOM05D001038 ORTHO05D000395 2.1e-13 80.5 155 38.7
A04p22180 Brassica napus HOM05D001038 ORTHO05D000395 2.7e-13 80.1 155 38.7
BcaC04g21625 Brassica carinata HOM05D001038 ORTHO05D016703 6.1e-13 79.0 136 40.4
BolC9t55839H Brassica oleracea HOM05D001038 ORTHO05D016703 6.1e-13 79.0 136 40.4
BcaC06g35568 Brassica carinata HOM05D001038 ORTHO05D016703 1.4e-12 77.8 57 70.2
C07p13440 Brassica napus HOM05D001038 ORTHO05D016703 1.4e-12 77.8 57 70.2
BolC7t41839H Brassica oleracea HOM05D001038 ORTHO05D016703 1.4e-12 77.8 57 70.2
BcaB08g36820 Brassica carinata HOM05D001038 ORTHO05D016703 1.5e-11 74.3 136 39.0
C09p60390 Brassica napus HOM05D001038 ORTHO05D016703 1.5e-11 74.3 136 39.0
BcaC06g35713 Brassica carinata HOM05D001038 ORTHO05D024045 9.8e-11 71.6 89 44.9
C07p11760 Brassica napus HOM05D001038 ORTHO05D024045 1.3e-10 71.2 85 47.1
BcaB01g01349 Brassica carinata HOM05D001038 ORTHO05D096136 2.8e-10 70.1 95 48.4
A03p31860 Brassica napus HOM05D001038 ORTHO05D024045 1.1e-09 68.2 164 33.5
A03p51100 Brassica napus HOM05D001038 ORTHO05D024045 1.1e-09 68.2 164 33.5
C07p34820 Brassica napus HOM05D001038 ORTHO05D000395 1.4e-09 67.8 189 32.8
BraA10t43660Z Brassica rapa HOM05D025413 ORTHO05D021599 1.8e-09 67.4 62 56.5
BcaB07g32737 Brassica carinata HOM05D001038 ORTHO05D000395 2.4e-09 67.0 69 50.7
BcaB07g33632 Brassica carinata HOM05D001038 ORTHO05D016703 3.5e-08 63.2 137 37.2
C05p48930 Brassica napus HOM05D001038 ORTHO05D016716 3.5e-08 63.2 74 48.6
BolC5t33633H Brassica oleracea HOM05D001038 ORTHO05D016716 3.5e-08 63.2 74 48.6
BcaB01g01698 Brassica carinata HOM05D001038 ORTHO05D016716 1.0e-07 61.6 72 45.8
BraA06t24545Z Brassica rapa HOM05D001038 ORTHO05D024045 1.7e-07 60.8 45 62.2
BcaC09g48467 Brassica carinata HOM05D000171 ORTHO05D000101 1.5e-06 57.8 66 48.5
A10p08770 Brassica napus HOM05D001038 ORTHO05D016776 1.5e-06 57.8 63 50.8
BraSC37t46126Z Brassica rapa HOM05D001038 ORTHO05D016776 1.9e-06 57.4 63 50.8
BcaC02g09232 Brassica carinata HOM05D003139 ORTHO05D003540 2.5e-06 57.0 65 47.7
BcaB05g23462 Brassica carinata HOM05D001038 ORTHO05D091267 3.2e-06 56.6 75 42.7
C08p22730 Brassica napus HOM05D001038 ORTHO05D016776 3.2e-06 56.6 63 50.8
BolC4t27749H Brassica oleracea HOM05D001038 ORTHO05D016776 3.2e-06 56.6 63 50.8
C04p40350 Brassica napus HOM05D001038 ORTHO05D016776 4.2e-06 56.2 63 49.2
BcaC01g03622 Brassica carinata HOM05D001038 ORTHO05D016776 5.5e-06 55.8 63 49.2
BcaB01g01825 Brassica carinata HOM05D001038 ORTHO05D000395 9.4e-06 55.1 186 28.0


User provided reference genes

Program Settings