Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g36196 Brassica carinata HOM05D009375 ORTHO05D015465 9.2e-62 240.0 115 100.0
BcaC06g36197 Brassica carinata HOM05D009375 ORTHO05D015465 2.2e-47 192.2 91 98.9
C07p06650 Brassica napus HOM05D009375 ORTHO05D015465 1.7e-44 182.6 87 96.6
BcaC06g36195 Brassica carinata HOM05D009375 ORTHO05D015465 1.0e-31 140.2 67 98.5
C07p06670 Brassica napus HOM05D009375 ORTHO05D015465 1.0e-31 140.2 67 98.5
BolC7t41089H Brassica oleracea HOM05D009375 ORTHO05D015465 1.1e-27 126.7 64 98.4
BolC8t47747H Brassica oleracea HOM05D009375 ORTHO05D015465 4.8e-26 121.3 70 87.1
BcaC07g37423 Brassica carinata HOM05D009375 ORTHO05D090521 3.1e-25 118.6 70 85.7
C08p09010 Brassica napus HOM05D009375 ORTHO05D015465 3.1e-25 118.6 70 85.7
C03p91770 Brassica napus HOM05D009375 ORTHO05D040289 1.3e-18 96.7 53 88.7
BolC3t21498H Brassica oleracea HOM05D009375 ORTHO05D040289 1.3e-18 96.7 53 88.7
BcaB01g01852 Brassica carinata HOM05D009375 ORTHO05D014094 3.2e-14 82.0 65 70.8
BolC1t02810H Brassica oleracea HOM05D009375 ORTHO05D014094 2.5e-11 72.4 57 66.7
C09p61240 Brassica napus HOM05D009375 ORTHO05D014094 3.3e-11 72.0 48 70.8
BcaC07g41318 Brassica carinata HOM05D009375 ORTHO05D014094 4.3e-11 71.6 66 57.6
BolC9t58966H Brassica oleracea HOM05D009375 ORTHO05D014094 4.3e-11 71.6 48 70.8
BcaC01g00995 Brassica carinata HOM05D009375 ORTHO05D014094 1.7e-10 69.7 57 64.9
BcaC07g41316 Brassica carinata HOM05D009375 ORTHO05D014094 1.7e-10 69.7 57 64.9
BraA09t37749Z Brassica rapa HOM05D001317 ORTHO05D001164 6.3e-10 67.8 57 63.2
BcaC04g18932 Brassica carinata HOM05D009375 ORTHO05D014094 1.8e-09 66.2 55 60.0
BcaC09g50118 Brassica carinata HOM05D009375 ORTHO05D014094 2.4e-09 65.9 55 60.0
C01p28820 Brassica napus HOM05D009375 ORTHO05D014094 2.4e-09 65.9 55 60.0
A09p21500 Brassica napus HOM05D001317 ORTHO05D001164 3.1e-09 65.5 57 61.4
A03p32940 Brassica napus HOM05D000821 ORTHO05D000931 2.9e-07 58.9 69 50.7
BcaB01g04839 Brassica carinata HOM05D009375 ORTHO05D014094 3.8e-07 58.5 44 68.2
BcaC08g44160 Brassica carinata HOM05D009375 ORTHO05D092482 3.8e-07 58.5 39 74.4
BraA05t23139Z Brassica rapa HOM05D000821 ORTHO05D000931 3.8e-07 58.5 40 75.0
BcaC01g01414 Brassica carinata HOM05D009375 ORTHO05D094617 5.0e-07 58.2 35 82.9
AL3G11790 Arabidopsis lyrata HOM05D000821 ORTHO05D000931 1.1e-06 57.0 31 87.1
BcaB04g21100 Brassica carinata HOM05D009375 ORTHO05D014094 1.1e-06 57.0 48 66.7
BNapus_Darmor_BZH_scaffold_99p00010 Brassica napus HOM05D000821 ORTHO05D000931 1.1e-06 57.0 31 87.1
BraA03t12462Z Brassica rapa HOM05D000821 ORTHO05D000931 1.1e-06 57.0 69 49.3
Thhalv10022357m.g Eutrema salsugineum HOM05D000821 ORTHO05D000931 1.1e-06 57.0 31 87.1
AT3G02470 Arabidopsis thaliana HOM05D000821 ORTHO05D000931 1.9e-06 56.2 31 83.9
BcaC01g04445 Brassica carinata HOM05D000821 ORTHO05D000931 1.9e-06 56.2 31 83.9
BcaC01g04553 Brassica carinata HOM05D000821 ORTHO05D000931 1.9e-06 56.2 31 83.9
BcaC09g47703 Brassica carinata HOM05D000821 ORTHO05D000931 1.9e-06 56.2 31 83.9
BNapus_Darmor_BZH_scaffold_208p00020 Brassica napus HOM05D000821 ORTHO05D000931 1.9e-06 56.2 31 83.9
C03p40060 Brassica napus HOM05D000821 ORTHO05D000931 1.9e-06 56.2 31 83.9
BolC1t05902H Brassica oleracea HOM05D000821 ORTHO05D000931 1.9e-06 56.2 31 83.9
BolC3t16272H Brassica oleracea HOM05D000821 ORTHO05D000931 1.9e-06 56.2 31 83.9
BcaB04g21409 Brassica carinata HOM05D000821 ORTHO05D000931 2.5e-06 55.8 31 83.9
A05p45220 Brassica napus HOM05D000821 ORTHO05D000931 2.5e-06 55.8 31 83.9
BraA05t20401Z Brassica rapa HOM05D000821 ORTHO05D014094 5.5e-06 54.7 31 83.9
BraA01t03334Z Brassica rapa HOM05D009375 ORTHO05D015465 7.2e-06 54.3 28 82.1
Carub.0003s0157 Capsella rubella HOM05D000821 ORTHO05D000931 9.4e-06 53.9 31 80.6
Sp3g01490 Schrenkiella parvula HOM05D000821 ORTHO05D000931 9.4e-06 53.9 31 80.6


User provided reference genes

Program Settings