Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g35568 Brassica carinata HOM05D001038 ORTHO05D016703 4.7e-202 707.6 349 100.0
C07p13440 Brassica napus HOM05D001038 ORTHO05D016703 8.5e-143 510.8 349 76.5
BolC7t41839H Brassica oleracea HOM05D001038 ORTHO05D016703 8.5e-143 510.8 349 76.5
BraA05t19810Z Brassica rapa HOM05D001038 ORTHO05D016703 9.5e-110 401.0 347 65.4
BcaB08g36820 Brassica carinata HOM05D001038 ORTHO05D016703 2.1e-96 356.7 347 59.7
C09p60390 Brassica napus HOM05D001038 ORTHO05D016703 1.0e-95 354.4 347 59.4
BcaC04g21625 Brassica carinata HOM05D001038 ORTHO05D016703 3.9e-95 352.4 347 58.8
BolC9t55839H Brassica oleracea HOM05D001038 ORTHO05D016703 7.3e-94 348.2 347 58.2
BcaB07g33632 Brassica carinata HOM05D001038 ORTHO05D016703 6.9e-36 155.6 207 46.9
A06p26770 Brassica napus HOM05D001038 ORTHO05D041898 8.8e-31 138.7 183 48.6
BcaB07g32041 Brassica carinata HOM05D001038 ORTHO05D016703 4.4e-30 136.3 230 38.3
BcaC08g44444 Brassica carinata HOM05D001038 ORTHO05D016716 1.7e-21 107.8 148 43.2
C06p18900 Brassica napus HOM05D001038 ORTHO05D016716 2.2e-21 107.5 143 45.5
BcaB01g01349 Brassica carinata HOM05D001038 ORTHO05D096136 4.8e-21 106.3 83 65.1
BraA10t43039Z Brassica rapa HOM05D001038 ORTHO05D000395 6.3e-21 105.9 114 53.5
A04p22180 Brassica napus HOM05D001038 ORTHO05D000395 1.4e-20 104.8 114 53.5
BcaC05g28787 Brassica carinata HOM05D001038 ORTHO05D016716 5.3e-20 102.8 157 42.0
BcaB08g35144 Brassica carinata HOM05D001038 ORTHO05D021599 2.7e-19 100.5 113 49.6
BcaC08g46990 Brassica carinata HOM05D025413 ORTHO05D021599 7.7e-19 99.0 110 49.1
BcaC08g44142 Brassica carinata HOM05D001038 ORTHO05D000395 2.2e-18 97.4 183 37.2
BcaB07g32567 Brassica carinata HOM05D001038 ORTHO05D010763 5.0e-18 96.3 114 51.8
BraA10t43660Z Brassica rapa HOM05D025413 ORTHO05D021599 6.1e-16 89.4 97 52.6
BraA08t34217Z Brassica rapa HOM05D001038 ORTHO05D016716 2.3e-15 87.4 96 50.0
BolC9t58942H Brassica oleracea HOM05D001038 ORTHO05D010763 8.8e-15 85.5 122 45.1
C07p34820 Brassica napus HOM05D001038 ORTHO05D000395 9.8e-14 82.0 152 37.5
BolC5t32403H Brassica oleracea HOM05D001038 ORTHO05D016716 1.3e-13 81.6 87 50.6
C07p11760 Brassica napus HOM05D001038 ORTHO05D024045 3.7e-13 80.1 112 40.2
BcaC05g27690 Brassica carinata HOM05D001038 ORTHO05D016716 4.8e-13 79.7 66 59.1
BcaC06g36746 Brassica carinata HOM05D001038 ORTHO05D010763 4.8e-13 79.7 57 70.2
BolC7t40492H Brassica oleracea HOM05D001038 ORTHO05D010763 4.8e-13 79.7 57 70.2
C05p48930 Brassica napus HOM05D001038 ORTHO05D016716 2.4e-12 77.4 347 25.4
BolC5t33633H Brassica oleracea HOM05D001038 ORTHO05D016716 2.4e-12 77.4 347 25.4
BcaC06g35698 Brassica carinata HOM05D001038 ORTHO05D031981 3.1e-12 77.0 77 53.2
C07p11920 Brassica napus HOM05D001038 ORTHO05D031981 9.1e-12 75.5 53 66.0
BcaB02g06555 Brassica carinata HOM05D001038 ORTHO05D010763 5.9e-11 72.8 120 37.5
A05p23600 Brassica napus HOM05D001038 ORTHO05D018589 5.9e-11 72.8 127 36.2
BraA05t21228Z Brassica rapa HOM05D001038 ORTHO05D018589 5.9e-11 72.8 127 36.2
BcaB04g17690 Brassica carinata HOM05D001038 ORTHO05D018589 1.0e-10 72.0 105 40.0
BcaC06g35713 Brassica carinata HOM05D001038 ORTHO05D024045 1.0e-10 72.0 114 38.6
BcaC08g46850 Brassica carinata HOM05D001038 ORTHO05D000395 1.0e-10 72.0 108 41.7
A03p31860 Brassica napus HOM05D001038 ORTHO05D024045 1.0e-10 72.0 111 42.3
A03p51100 Brassica napus HOM05D001038 ORTHO05D024045 1.0e-10 72.0 111 42.3
BolC4t26248H Brassica oleracea HOM05D001038 ORTHO05D018589 1.0e-10 72.0 117 37.6
BcaB07g32737 Brassica carinata HOM05D001038 ORTHO05D000395 1.7e-10 71.2 115 37.4
BcaB06g25472 Brassica carinata HOM05D001038 ORTHO05D010763 2.3e-10 70.9 110 35.5
BcaNung01360 Brassica carinata HOM05D001038 ORTHO05D010763 2.3e-10 70.9 103 40.8
BcaC03g15830 Brassica carinata HOM05D001038 ORTHO05D016716 2.9e-10 70.5 47 68.1
BcaB05g22891 Brassica carinata HOM05D001038 ORTHO05D010763 3.8e-10 70.1 134 35.8
BcaB01g01825 Brassica carinata HOM05D001038 ORTHO05D000395 6.5e-10 69.3 133 36.1
BcaB06g26737 Brassica carinata HOM05D001038 ORTHO05D010763 8.6e-10 68.9 107 40.2
BcaC02g08100 Brassica carinata HOM05D001038 ORTHO05D018589 1.1e-09 68.6 106 37.7
BcaB07g33328 Brassica carinata HOM05D001038 ORTHO05D010763 1.5e-09 68.2 120 38.3
BcaB03g16464 Brassica carinata HOM05D001038 ORTHO05D018589 2.5e-09 67.4 119 35.3
BcaC07g39263 Brassica carinata HOM05D001038 ORTHO05D016776 5.5e-09 66.2 104 40.4
BraA06t24004Z Brassica rapa HOM05D001038 ORTHO05D041898 1.2e-08 65.1 45 66.7
BraA06t24545Z Brassica rapa HOM05D001038 ORTHO05D024045 1.2e-08 65.1 109 38.5
BcaC08g44172 Brassica carinata HOM05D001038 ORTHO05D018589 1.0e-07 62.0 96 37.5
BcaB02g10756 Brassica carinata HOM05D000367 ORTHO05D001227 1.4e-07 61.6 100 37.0
BcaB01g01698 Brassica carinata HOM05D001038 ORTHO05D016716 4.0e-07 60.1 89 42.7
BraSC37t46126Z Brassica rapa HOM05D001038 ORTHO05D016776 4.0e-07 60.1 54 53.7
A10p08770 Brassica napus HOM05D001038 ORTHO05D016776 6.8e-07 59.3 54 53.7
C04p40350 Brassica napus HOM05D001038 ORTHO05D016776 6.8e-07 59.3 54 53.7
BolC4t25613H Brassica oleracea HOM05D001038 ORTHO05D016776 6.8e-07 59.3 54 53.7
BcaB02g10939 Brassica carinata HOM05D001038 ORTHO05D000395 1.2e-06 58.5 151 31.1
C08p22730 Brassica napus HOM05D001038 ORTHO05D016776 1.5e-06 58.2 54 53.7
BolC4t27749H Brassica oleracea HOM05D001038 ORTHO05D016776 1.5e-06 58.2 54 53.7
BcaB06g27482 Brassica carinata HOM05D001038 ORTHO05D093375 2.0e-06 57.8 184 33.7
BcaC01g03622 Brassica carinata HOM05D001038 ORTHO05D016776 2.6e-06 57.4 54 51.9
BcaB05g23462 Brassica carinata HOM05D001038 ORTHO05D091267 3.4e-06 57.0 79 41.8
BcaC06g36128 Brassica carinata HOM05D007774 ORTHO05D000395 3.4e-06 57.0 96 34.4
BcaC07g37120 Brassica carinata HOM05D025413 ORTHO05D021599 3.4e-06 57.0 113 37.2
C07p07480 Brassica napus HOM05D001038 ORTHO05D000395 3.4e-06 57.0 96 34.4
BolC7t41164H Brassica oleracea HOM05D001038 ORTHO05D000395 3.4e-06 57.0 96 34.4
BcaB01g01601 Brassica carinata HOM05D001038 ORTHO05D090378 4.4e-06 56.6 120 31.7
A01p38280 Brassica napus HOM05D001038 ORTHO05D000395 5.7e-06 56.2 219 26.9
BraA09t41072Z Brassica rapa HOM05D001038 ORTHO05D000395 5.7e-06 56.2 219 26.9
BcaB05g22095 Brassica carinata HOM05D001038 ORTHO05D016776 7.5e-06 55.8 155 28.4
BcaB06g26720 Brassica carinata HOM05D001038 ORTHO05D000395 7.5e-06 55.8 170 31.2
BcaC02g09232 Brassica carinata HOM05D003139 ORTHO05D003540 7.5e-06 55.8 54 50.0
BcaC05g24336 Brassica carinata HOM05D001038 ORTHO05D016776 7.5e-06 55.8 60 51.7
BcaNung00468 Brassica carinata HOM05D001038 ORTHO05D000395 7.5e-06 55.8 91 38.5
C08p04910 Brassica napus HOM05D025413 ORTHO05D021599 7.5e-06 55.8 168 31.5
BolC8t47294H Brassica oleracea HOM05D025413 ORTHO05D021599 7.5e-06 55.8 168 31.5


User provided reference genes

Program Settings