Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g35104 Brassica carinata HOM05D000183 ORTHO05D000100 1.2e-33 146.0 79 100.0
C07p19760 Brassica napus HOM05D000183 ORTHO05D000100 5.1e-11 70.9 44 84.1
BolC7t42490H Brassica oleracea HOM05D000183 ORTHO05D000100 5.1e-11 70.9 44 84.1
Thhalv10008487m.g Eutrema salsugineum HOM05D000183 ORTHO05D000100 1.8e-08 62.4 34 91.2
A08p27670 Brassica napus HOM05D000183 ORTHO05D000100 4.0e-08 61.2 34 88.2
C08p22640 Brassica napus HOM05D000183 ORTHO05D000100 4.0e-08 61.2 34 88.2
BolC8t49902H Brassica oleracea HOM05D000183 ORTHO05D000100 4.0e-08 61.2 34 88.2
Carub.0001s2402 Capsella rubella HOM05D000183 ORTHO05D000100 4.0e-08 61.2 34 88.2
Sp1g21820 Schrenkiella parvula HOM05D000183 ORTHO05D000100 9.0e-08 60.1 34 85.3
AL1G38590 Arabidopsis lyrata HOM05D000183 ORTHO05D000100 1.2e-07 59.7 34 85.3
CARHR024950 Cardamine hirsuta HOM05D000183 ORTHO05D000100 1.2e-07 59.7 34 85.3
AT1G26960 Arabidopsis thaliana HOM05D000183 ORTHO05D000100 4.5e-07 57.8 34 82.4
AL2G28980 Arabidopsis lyrata HOM05D000183 ORTHO05D000100 5.8e-07 57.4 34 79.4
AT1G69780 Arabidopsis thaliana HOM05D000183 ORTHO05D000100 5.8e-07 57.4 34 79.4
BcaB03g14098 Brassica carinata HOM05D000183 ORTHO05D000100 5.8e-07 57.4 34 85.3
BcaC03g15123 Brassica carinata HOM05D000183 ORTHO05D000100 5.8e-07 57.4 34 79.4
C02p26890 Brassica napus HOM05D000183 ORTHO05D000100 5.8e-07 57.4 34 79.4
BolC2t08753H Brassica oleracea HOM05D000183 ORTHO05D000100 5.8e-07 57.4 34 79.4
Carub.0002s1646 Capsella rubella HOM05D000183 ORTHO05D000100 5.8e-07 57.4 34 79.4
CARHR062850 Cardamine hirsuta HOM05D000183 ORTHO05D000100 5.8e-07 57.4 34 79.4
Thhalv10018944m.g Eutrema salsugineum HOM05D000183 ORTHO05D000100 5.8e-07 57.4 34 79.4
Sp5g24890 Schrenkiella parvula HOM05D000183 ORTHO05D000100 5.8e-07 57.4 34 79.4
BcaB05g24485 Brassica carinata HOM05D000183 ORTHO05D000100 1.7e-06 55.8 34 79.4
BraA02t06674Z Brassica rapa HOM05D000183 ORTHO05D000100 1.7e-06 55.8 34 79.4
TAR374G1120 Trochodendron aralioides HOM05D000183 ORTHO05D000100 2.2e-06 55.5 33 81.8
TAR622G1075 Trochodendron aralioides HOM05D000183 ORTHO05D000100 2.2e-06 55.5 33 78.8
MELO3C012079.2 Cucumis melo HOM05D000183 ORTHO05D000100 2.9e-06 55.1 33 81.8
CsaV3_5G032510 Cucumis sativus L. HOM05D000183 ORTHO05D000100 2.9e-06 55.1 33 81.8
Sed0011889 Sechium edule HOM05D000183 ORTHO05D000100 2.9e-06 55.1 33 81.8
C05p23970 Brassica napus HOM05D000183 ORTHO05D000100 3.8e-06 54.7 34 82.4
BolC5t31133H Brassica oleracea HOM05D000183 ORTHO05D000100 3.8e-06 54.7 34 82.4
BcaC08g46424 Brassica carinata HOM05D000183 ORTHO05D000100 4.9e-06 54.3 34 76.5
A02p16150 Brassica napus HOM05D000183 ORTHO05D000100 4.9e-06 54.3 34 76.5
A07p36200 Brassica napus HOM05D000183 ORTHO05D000100 4.9e-06 54.3 34 76.5
C06p43580 Brassica napus HOM05D000183 ORTHO05D000100 4.9e-06 54.3 34 76.5
BolC6t39430H Brassica oleracea HOM05D000183 ORTHO05D000100 4.9e-06 54.3 34 76.5
BraA07t31194Z Brassica rapa HOM05D000183 ORTHO05D000100 4.9e-06 54.3 34 76.5
CSS0014547 Camellia sinensis var. sinensis HOM05D000183 ORTHO05D000100 4.9e-06 54.3 33 78.8
CSS0042785 Camellia sinensis var. sinensis HOM05D000183 ORTHO05D000100 4.9e-06 54.3 33 78.8
PSO478G4715 Papaver somniferum HOM05D000183 ORTHO05D000100 4.9e-06 54.3 34 76.5
Ciclev10032279m.g Citrus clementina HOM05D000183 ORTHO05D000100 6.4e-06 53.9 33 78.8
MBI02_g33850_MAGBIO Magnolia biondii HOM05D000183 ORTHO05D000100 6.4e-06 53.9 34 76.5
MBI05_g00389_MAGBIO Magnolia biondii HOM05D000183 ORTHO05D000100 6.4e-06 53.9 34 76.5
PSO832G0157 Papaver somniferum HOM05D000183 ORTHO05D000100 6.4e-06 53.9 32 78.1
Sed0011691 Sechium edule HOM05D000183 ORTHO05D000100 6.4e-06 53.9 33 78.8


User provided reference genes

Program Settings