Gene: Carub.0002s1646

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0002s1646
  • Transcript Identifier Carub.0002s1646.1
  • Gene Type Coding gene
  • Location scaffold_2 : 9708764-9710098 : positive

Gene Family Information

  • ID HOM05D000183
  • #Genes/#Species 2094/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0002s1646.v1.1
  • pacid 39243279
  • synonym Carubv10020715m.g

Descriptions

  • Description PTHR24326:SF176 - HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-13-RELATED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0080022
ISO
PLAZA Integrative Orthologyprimary root development AT1G69780
GO:0048826
ISO
PLAZA Integrative Orthologycotyledon morphogenesis AT1G69780
GO:0009965
ISO
PLAZA Integrative Orthologyleaf morphogenesis AT1G69780
GO:0009744
ISO
PLAZA Integrative Orthologyresponse to sucrose AT1G69780

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0043565
IEA
InterProsequence-specific DNA binding
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT1G69780

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000047 Helix-turn-helix motif
IPR001356 Homeobox domain
IPR003106 Leucine zipper, homeobox-associated
IPR009057 Homeobox-like domain superfamily
Mapman id Description
15.5.3.1 RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (HD-ZIP I/II)