Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g34615 Brassica carinata HOM05D003410 ORTHO05D003881 3.7e-33 144.4 80 100.0
BcaC06g34614 Brassica carinata HOM05D003410 ORTHO05D003881 1.8e-19 99.0 66 83.3
C07p26430 Brassica napus HOM05D003410 ORTHO05D003881 1.8e-19 99.0 66 83.3
BcaC06g34608 Brassica carinata HOM05D003410 ORTHO05D003881 1.1e-18 96.3 66 81.8
C07p26530 Brassica napus HOM05D003410 ORTHO05D003881 1.1e-18 96.3 66 81.8
BolC7t43173H Brassica oleracea HOM05D003410 ORTHO05D003881 1.1e-18 96.3 66 81.8
BolC7t43180H Brassica oleracea HOM05D003410 ORTHO05D003881 1.1e-18 96.3 66 81.8
BraA06t27627Z Brassica rapa HOM05D003410 ORTHO05D003881 1.7e-17 92.4 66 78.8
A06p47590 Brassica napus HOM05D003410 ORTHO05D003881 3.7e-17 91.3 66 77.3
Sp2g08800 Schrenkiella parvula HOM05D003410 ORTHO05D003881 5.3e-16 87.4 66 74.2
Thhalv10003294m.g Eutrema salsugineum HOM05D003410 ORTHO05D003881 1.3e-14 82.8 66 71.2
AL8G16140 Arabidopsis lyrata HOM05D003410 ORTHO05D003881 8.5e-14 80.1 66 72.7
AT5G43970 Arabidopsis thaliana HOM05D003410 ORTHO05D003881 8.5e-14 80.1 66 72.7
BcaC03g16619 Brassica carinata HOM05D003410 ORTHO05D003881 8.5e-14 80.1 63 69.8
BcaC04g21879 Brassica carinata HOM05D003410 ORTHO05D003881 8.5e-14 80.1 66 69.7
C02p44520 Brassica napus HOM05D003410 ORTHO05D003881 8.5e-14 80.1 63 69.8
C09p26240 Brassica napus HOM05D003410 ORTHO05D003881 8.5e-14 80.1 66 69.7
BolC9t55525H Brassica oleracea HOM05D003410 ORTHO05D003881 8.5e-14 80.1 66 69.7
BcaB07g30549 Brassica carinata HOM05D003410 ORTHO05D003881 1.1e-13 79.7 64 73.4
BolC2t10496H Brassica oleracea HOM05D003410 ORTHO05D003881 4.2e-13 77.8 50 84.0
CARHR179430 Cardamine hirsuta HOM05D003410 ORTHO05D003881 5.5e-13 77.4 66 69.7
Carub.0008s0458 Capsella rubella HOM05D003410 ORTHO05D003881 1.2e-12 76.3 66 71.2
Aa31LG5G3300 Aethionema arabicum HOM05D003410 ORTHO05D003881 4.7e-12 74.3 66 69.7
A09p20730 Brassica napus HOM05D003410 ORTHO05D003881 1.0e-11 73.2 66 65.2
BraA09t37677Z Brassica rapa HOM05D003410 ORTHO05D003881 1.0e-11 73.2 66 65.2
THA.LOC104801123 Tarenaya hassleriana HOM05D003410 ORTHO05D003881 3.0e-11 71.6 66 65.2
BcaB07g30984 Brassica carinata HOM05D003410 ORTHO05D003881 5.2e-11 70.9 65 66.2
THA.LOC104815972 Tarenaya hassleriana HOM05D003410 ORTHO05D003881 5.7e-10 67.4 66 62.1
Sp1g02890 Schrenkiella parvula HOM05D003410 ORTHO05D003881 1.3e-09 66.2 52 76.9
Thhalv10009189m.g Eutrema salsugineum HOM05D003410 ORTHO05D003881 4.8e-09 64.3 71 60.6
Aa31LG1G20770 Aethionema arabicum HOM05D003410 ORTHO05D003881 8.2e-09 63.5 66 62.1
AL1G13670 Arabidopsis lyrata HOM05D003410 ORTHO05D003881 4.1e-08 61.2 52 69.2
BcaC05g24474 Brassica carinata HOM05D003410 ORTHO05D003881 4.1e-08 61.2 66 60.6
BolC5t29012H Brassica oleracea HOM05D003410 ORTHO05D003881 4.1e-08 61.2 66 60.6
AT1G04070 Arabidopsis thaliana HOM05D003410 ORTHO05D003881 7.0e-08 60.5 52 73.1
A10p02530 Brassica napus HOM05D003410 ORTHO05D003881 9.1e-08 60.1 59 61.0
BraA10t42522Z Brassica rapa HOM05D003410 ORTHO05D003881 5.9e-07 57.4 59 59.3
Carub.0001s0322 Capsella rubella HOM05D003410 ORTHO05D003881 1.7e-06 55.8 66 54.5
CARHR003410 Cardamine hirsuta HOM05D003410 ORTHO05D003881 1.7e-06 55.8 56 60.7
Cpa.g.sc87.22 Carica papaya HOM05D003410 ORTHO05D003881 2.9e-06 55.1 62 54.8


User provided reference genes

Program Settings