Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g31734 Brassica carinata HOM05D005164 ORTHO05D006398 2.0e-217 758.8 398 100.0
A06p48120 Brassica napus HOM05D005164 ORTHO05D006398 2.5e-215 751.9 398 99.0
BraA06t27681Z Brassica rapa HOM05D005164 ORTHO05D006398 2.5e-215 751.9 398 99.0
BcaC02g10785 Brassica carinata HOM05D005164 ORTHO05D006398 1.8e-213 745.7 398 98.5
C04p25110 Brassica napus HOM05D005164 ORTHO05D006398 1.8e-213 745.7 398 98.5
BolC4t24015H Brassica oleracea HOM05D005164 ORTHO05D006398 1.8e-213 745.7 398 98.5
A02p27610 Brassica napus HOM05D005164 ORTHO05D006398 2.1e-209 732.3 398 96.5
BolC2t10406H Brassica oleracea HOM05D005164 ORTHO05D006398 2.1e-209 732.3 398 96.5
BraA02t07794Z Brassica rapa HOM05D005164 ORTHO05D006398 2.1e-209 732.3 398 96.5
Sp2g07720 Schrenkiella parvula HOM05D005164 ORTHO05D006398 1.7e-208 729.2 398 96.2
BcaC03g16546 Brassica carinata HOM05D005164 ORTHO05D006398 3.3e-207 724.9 398 96.0
C02p43640 Brassica napus HOM05D005164 ORTHO05D006398 3.3e-207 724.9 398 96.0
BcaB07g30597 Brassica carinata HOM05D005164 ORTHO05D006398 5.6e-207 724.2 398 95.7
Carub.0008s0578 Capsella rubella HOM05D005164 ORTHO05D006398 1.8e-205 719.2 398 94.0
CARHR181050 Cardamine hirsuta HOM05D005164 ORTHO05D006398 4.4e-204 714.5 398 93.7
AT5G42970 Arabidopsis thaliana HOM05D005164 ORTHO05D006398 3.7e-203 711.4 398 93.0
AL8G17800 Arabidopsis lyrata HOM05D005164 ORTHO05D006398 1.4e-202 709.5 398 92.7
Thhalv10003436m.g Eutrema salsugineum HOM05D005164 ORTHO05D006398 9.2e-202 706.8 398 93.0
THA.LOC104814156 Tarenaya hassleriana HOM05D005164 ORTHO05D006398 1.3e-200 703.0 399 92.7
Aa31LG9G13090 Aethionema arabicum HOM05D005164 ORTHO05D006398 3.3e-199 698.4 398 92.7
THA.LOC104822841 Tarenaya hassleriana HOM05D005164 ORTHO05D006398 4.7e-198 694.5 398 91.0
Ciclev10001386m.g Citrus clementina HOM05D005164 ORTHO05D006398 7.6e-188 660.6 398 86.2
MSTRG.24294 Avicennia marina HOM05D005164 ORTHO05D006398 3.8e-187 658.3 398 85.7
Sc02g0006310 Simmondsia chinensis HOM05D005164 ORTHO05D006398 8.4e-187 657.1 398 85.4
COL.COLO4_26343 Corchorus olitorius HOM05D005164 ORTHO05D006398 2.4e-186 655.6 398 85.7
Cfa018135 Carpinus fangiana HOM05D005164 ORTHO05D006398 4.2e-186 654.8 398 84.7
Manes.18G028500 Manihot esculenta HOM05D005164 ORTHO05D006398 1.2e-185 653.3 398 84.9
EL10Ac8g20456 Beta vulgaris HOM05D005164 ORTHO05D006398 2.1e-185 652.5 398 85.2
CiPaw.16G055400 Carya illinoinensis HOM05D005164 ORTHO05D006398 2.1e-185 652.5 398 84.7
Gohir.A03G078200 Gossypium hirsutum HOM05D005164 ORTHO05D006398 2.7e-185 652.1 398 85.2
Thecc.08G024200 Theobroma cacao HOM05D005164 ORTHO05D006398 3.5e-185 651.7 398 85.4
Gohir.D02G094300 Gossypium hirsutum HOM05D005164 ORTHO05D006398 7.8e-185 650.6 398 84.9
Gorai.005G107200 Gossypium raimondii HOM05D005164 ORTHO05D006398 7.8e-185 650.6 398 84.9
Potri.002G263200 Populus trichocarpa HOM05D005164 ORTHO05D006398 1.7e-184 649.4 398 84.7
CiPaw.15G075600 Carya illinoinensis HOM05D005164 ORTHO05D006398 2.3e-184 649.0 398 84.7
Eucgr.F01909 Eucalyptus grandis HOM05D005164 ORTHO05D006398 6.6e-184 647.5 398 84.7
QL02p007897 Quercus lobata HOM05D005164 ORTHO05D006398 6.6e-184 647.5 397 83.9
Ca_25003_v3 Cicer arietinum L. HOM05D005164 ORTHO05D006398 8.7e-184 647.1 398 83.9
RcHm_v2.0_Chr6g0300751 Rosa chinensis HOM05D005164 ORTHO05D006398 1.1e-183 646.7 398 83.9
TWI56G0324 Tripterygium wilfordii HOM05D005164 ORTHO05D006398 1.1e-183 646.7 398 84.4
Lj4C784T1 Lonicera japonica HOM05D005164 ORTHO05D006398 1.9e-183 646.0 398 83.9
CANSAT64G0480 Cannabis sativa HOM05D005164 ORTHO05D006398 2.5e-183 645.6 398 83.7
Duzib041G0411 Durio zibethinus HOM05D005164 ORTHO05D006398 2.5e-183 645.6 398 84.4
Gohir.A05G260000 Gossypium hirsutum HOM05D005164 ORTHO05D006398 2.5e-183 645.6 398 84.4
TAR376G0296 Trochodendron aralioides HOM05D005164 ORTHO05D006398 2.5e-183 645.6 398 83.9
GSVIVG01009684001 Vitis vinifera HOM05D005164 ORTHO05D006398 2.5e-183 645.6 398 84.4
Nn5g29540 Nelumbo nucifera HOM05D005164 ORTHO05D006398 3.3e-183 645.2 398 84.4
SalBow8G2733 Salvia bowleyana HOM05D005164 ORTHO05D006398 4.3e-183 644.8 398 83.4
Dinv36062 Davidia involucrata HOM05D005164 ORTHO05D006398 7.3e-183 644.0 398 83.9
Glyma.09G231100 Glycine max HOM05D005164 ORTHO05D006398 1.3e-182 643.3 398 83.4
HanXRQChr02g0040181 Helianthus annuus HOM05D005164 ORTHO05D006398 1.3e-182 643.3 398 83.7
ATR0733G076 Amborella trichopoda HOM05D005164 ORTHO05D006398 1.6e-182 642.9 398 83.7
AUR62014895 Chenopodium quinoa HOM05D005164 ORTHO05D006398 2.1e-182 642.5 398 84.2
Lj3g0003260 Lotus japonicus HOM05D005164 ORTHO05D006398 3.6e-182 641.7 398 83.4
Solyc04g080160.3 Solanum lycopersicum HOM05D005164 ORTHO05D006398 3.6e-182 641.7 398 83.2
Sopen04g033750 Solanum pennellii HOM05D005164 ORTHO05D006398 3.6e-182 641.7 398 83.2
Psat3g167280 Pisum sativum HOM05D005164 ORTHO05D006398 6.2e-182 641.0 398 83.2
Phvul.011G006200 Phaseolus vulgaris HOM05D005164 ORTHO05D006398 8.1e-182 640.6 398 83.4
Potri.014G180800 Populus trichocarpa HOM05D005164 ORTHO05D006398 8.1e-182 640.6 398 83.7
Glyma.12G005400 Glycine max HOM05D005164 ORTHO05D006398 1.1e-181 640.2 398 83.2
PGSC0003DMG400005163 Solanum tuberosum HOM05D005164 ORTHO05D006398 1.1e-181 640.2 398 82.9
VMungo1127G0366 Vigna mungo HOM05D005164 ORTHO05D006398 1.1e-181 640.2 398 83.4
Gohir.D05G261900 Gossypium hirsutum HOM05D005164 ORTHO05D006398 1.4e-181 639.8 398 83.9
Lsat_1_v5_gn_1_17561 Lactuca sativa HOM05D005164 ORTHO05D006398 1.4e-181 639.8 398 83.9
Medtr0173s0030 Medicago truncatula HOM05D005164 ORTHO05D006398 1.8e-181 639.4 398 82.9
Hund21200 Selenicereus undatus HOM05D005164 ORTHO05D006398 2.4e-181 639.0 398 84.2
Peaxi162Scf00690g00117 Petunia axillaris HOM05D005164 ORTHO05D006398 4.0e-181 638.3 398 83.4
Cc10_g03080 Coffea canephora HOM05D005164 ORTHO05D006398 6.9e-181 637.5 398 83.2
MELO3C003848.2 Cucumis melo HOM05D005164 ORTHO05D006398 9.0e-181 637.1 398 83.4
CsaV3_3G045000 Cucumis sativus L. HOM05D005164 ORTHO05D006398 9.0e-181 637.1 398 83.4
ECA247G1488 Erigeron canadensis HOM05D005164 ORTHO05D006398 9.0e-181 637.1 398 83.4
Os03g0197400 Oryza sativa ssp. japonica HOM05D005164 ORTHO05D006398 9.0e-181 637.1 400 82.5
CANSAT25G0119 Cannabis sativa HOM05D005164 ORTHO05D006398 2.6e-180 635.6 403 81.9
FvH4_2g40000 Fragaria vesca HOM05D005164 ORTHO05D006398 3.4e-180 635.2 399 83.0
FAN27G0257 Fragaria x ananassa HOM05D005164 ORTHO05D006398 3.4e-180 635.2 399 83.0
Gorai.009G273800 Gossypium raimondii HOM05D005164 ORTHO05D006398 3.4e-180 635.2 401 83.3
Sed0001534 Sechium edule HOM05D005164 ORTHO05D006398 7.6e-180 634.0 399 83.2
FAN15G2586 Fragaria x ananassa HOM05D005164 ORTHO05D006398 9.9e-180 633.6 399 82.7
DCAR_019523 Daucus carota HOM05D005164 ORTHO05D006398 1.3e-179 633.3 398 82.4
Sed0021376 Sechium edule HOM05D005164 ORTHO05D006398 3.8e-179 631.7 398 82.4
Gorai.002G128900 Gossypium raimondii HOM05D005164 ORTHO05D006398 6.4e-179 630.9 398 81.7
FAN20G1227 Fragaria x ananassa HOM05D005164 ORTHO05D006398 1.9e-178 629.4 399 82.5
Migut.N00498 Erythranthe guttata HOM05D005164 ORTHO05D006398 2.4e-178 629.0 398 81.9
PGR031G3751 Punica granatum HOM05D005164 ORTHO05D006398 2.4e-178 629.0 398 82.7
Gohir.D01G104900 Gossypium hirsutum HOM05D005164 ORTHO05D006398 3.2e-178 628.6 398 81.7
Aqoxy6G01049 Aquilegia oxysepala HOM05D005164 ORTHO05D006398 4.2e-178 628.2 398 81.4
CAN.G1126.40 Capsicum annuum HOM05D005164 ORTHO05D006398 7.1e-178 627.5 398 81.2
Gohir.A01G116500 Gossypium hirsutum HOM05D005164 ORTHO05D006398 1.2e-177 626.7 398 81.7
MD08G1033300 Malus domestica HOM05D005164 ORTHO05D006398 3.0e-176 622.1 398 80.9
CDE02G4403 Ceratophyllum demersum HOM05D005164 ORTHO05D006398 6.7e-176 620.9 398 81.2
MD15G1029900 Malus domestica HOM05D005164 ORTHO05D006398 1.6e-174 616.3 406 79.3
Zm00001eb008060 Zea mays HOM05D005164 ORTHO05D006398 2.8e-174 615.5 440 74.5
AUR62031100 Chenopodium quinoa HOM05D005164 ORTHO05D006398 3.7e-174 615.1 398 81.7
Oeu009868.2 Olea europaea HOM05D005164 ORTHO05D006398 1.1e-173 613.6 477 70.4
Haze_17990 Corylus avellana HOM05D005164 ORTHO05D006398 5.8e-172 607.8 501 67.5
unitig_22.g6774 Utricularia gibba HOM05D005164 ORTHO05D006398 7.6e-172 607.4 392 80.9
CDE01G0241 Ceratophyllum demersum HOM05D005164 ORTHO05D006398 9.9e-172 607.1 402 79.4
ClCG05G019140 Citrullus lanatus HOM05D005164 ORTHO05D006398 1.2e-169 600.1 398 80.2
PSO541G6137 Papaver somniferum HOM05D005164 ORTHO05D006398 3.5e-169 598.6 398 78.6
Hma1.2p1_0023F.1_g014900 Hydrangea macrophylla HOM05D005164 ORTHO05D006398 6.0e-169 597.8 490 68.2
PSO675G3600 Papaver somniferum HOM05D005164 ORTHO05D006398 7.9e-169 597.4 398 78.4
Nitab4.5_0000110g0500 Nicotiana tabacum HOM05D005164 ORTHO05D006398 1.0e-168 597.0 398 79.1
Prupe.1G381600 Prunus persica HOM05D005164 ORTHO05D006398 3.9e-168 595.1 398 79.1
Nitab4.5_0010187g0010 Nicotiana tabacum HOM05D005164 ORTHO05D006398 1.3e-166 590.1 398 78.9
Mapoly0072s0034 Marchantia polymorpha HOM05D005164 ORTHO05D006398 2.1e-166 589.3 398 73.9
SGA_v2.0_scaffold326G48708 Striga asiatica HOM05D005164 ORTHO05D006398 2.8e-166 589.0 355 84.8
Sabra14G0141000 Salix brachista HOM05D005164 ORTHO05D006398 4.9e-163 578.2 437 72.8
Rhsim06G0035000 Rhododendron simsii HOM05D005164 ORTHO05D006398 6.5e-163 577.8 418 74.6
Hma1.2p1_0469F.1_g159190 Hydrangea macrophylla HOM05D005164 ORTHO05D006398 8.4e-163 577.4 439 72.7
Pp3c5_28450 Physcomitrium patens HOM05D005164 ORTHO05D006398 1.4e-162 576.6 398 72.6
Atru.chr13.515 Acer truncatum HOM05D005164 ORTHO05D006398 1.9e-162 576.2 353 85.0
MBI17_g39721_MAGBIO Magnolia biondii HOM05D005164 ORTHO05D006398 9.3e-162 573.9 431 73.5
Actinidia22558 Actinidia chinensis HOM05D005164 ORTHO05D006398 1.8e-160 569.7 377 79.8
SMO364G0673 Selaginella moellendorffii HOM05D005164 ORTHO05D006398 6.7e-160 567.8 398 71.4
AagrBONN_evm.TU.Sc2ySwM_117.2514 Anthoceros agrestis HOM05D005164 ORTHO05D006398 8.7e-160 567.4 397 71.0
Manes.05G161900 Manihot esculenta HOM05D005164 ORTHO05D006398 1.4e-157 560.1 353 82.4
TPR.G3648 Trifolium pratense HOM05D005164 ORTHO05D006398 1.1e-154 550.4 387 76.2
CBR_g36268 Chara braunii HOM05D005164 ORTHO05D006398 2.1e-145 519.6 395 66.3
vmacro21627 Vaccinium macrocarpon HOM05D005164 ORTHO05D006398 9.7e-143 510.8 398 69.8
Duzib093G0265 Durio zibethinus HOM05D005164 ORTHO05D006398 9.4e-138 494.2 398 68.1
HPP92_024905 Vanilla planifolia HOM05D005164 ORTHO05D006398 6.5e-131 471.5 347 71.5
Actinidia15313 Actinidia chinensis HOM05D005164 ORTHO05D006398 1.0e-128 464.2 419 62.3
CSS0020238 Camellia sinensis var. sinensis HOM05D005164 ORTHO05D006398 1.0e-123 447.6 271 84.5
CAN.G416.53 Capsicum annuum HOM05D005164 ORTHO05D006398 4.1e-117 425.6 312 72.8
Cre11.g478240 Chlamydomonas reinhardtii HOM05D005164 ORTHO05D006398 4.4e-111 405.6 394 53.8
RcHm_v2.0_Chr2g0166611 Rosa chinensis HOM05D005164 ORTHO05D006398 6.8e-104 381.7 229 85.6
MCO16G668 Micromonas commoda HOM05D005164 ORTHO05D006398 2.6e-103 379.8 402 50.7
Cpa.g.sc64.68 Carica papaya HOM05D005164 ORTHO05D006398 4.1e-93 345.9 216 82.4
PRCOL_00006114 Prasinoderma coloniale HOM05D005164 ORTHO05D006398 3.6e-89 332.8 404 47.5
SEGI_27147 Sequoiadendron giganteum HOM05D005164 ORTHO05D006398 4.0e-80 302.8 213 72.3
Sopen04g033730 Solanum pennellii HOM05D005164 ORTHO05D006398 7.8e-76 288.5 214 71.0
GSVIVG01023193001 Vitis vinifera HOM05D005164 ORTHO05D006398 2.4e-61 240.4 150 82.0
GSVIVG01003780001 Vitis vinifera HOM05D005164 ORTHO05D006398 7.9e-60 235.3 150 80.0
Carub.0004s0266 Capsella rubella HOM05D005164 ORTHO05D006398 1.9e-58 230.7 146 85.6
Cfa024373 Carpinus fangiana HOM05D005164 ORTHO05D006398 3.3e-58 229.9 358 38.3
MBI17_g35116_MAGBIO Magnolia biondii HOM05D005164 ORTHO05D006398 8.7e-51 205.3 183 65.6
Haze_26904 Corylus avellana HOM05D005164 ORTHO05D006398 4.5e-39 166.4 203 44.8
arahy.Tifrunner.gnm1.ann1.ABX6XB Arachis hypogaea HOM05D005164 ORTHO05D006398 5.1e-35 152.9 243 44.9
arahy.Tifrunner.gnm1.ann1.D3INNH Arachis hypogaea HOM05D005164 ORTHO05D006398 3.1e-32 143.7 94 79.8
arahy.Tifrunner.gnm1.ann1.R33BY8 Arachis hypogaea HOM05D005164 ORTHO05D006398 3.1e-32 143.7 94 79.8
TPR.G136 Trifolium pratense HOM05D005164 ORTHO05D006398 2.5e-13 80.9 49 73.5
arahy.Tifrunner.gnm1.ann1.ZV61IE Arachis hypogaea HOM05D005164 ORTHO05D006398 4.7e-12 76.6 66 65.2
ECA240G1489 Erigeron canadensis HOM05D001185 ORTHO05D003777 2.0e-07 61.2 330 23.6
arahy.Tifrunner.gnm1.ann1.2K5AT5 Arachis hypogaea HOM05D005164 ORTHO05D006398 3.5e-07 60.5 42 69.0
CsaV3_2G017820 Cucumis sativus L. HOM05D001185 ORTHO05D003777 2.9e-06 57.4 330 22.4


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