Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g31648 Brassica carinata HOM05D000622 ORTHO05D000475 1.9e-142 509.2 274 100.0
BcaB06g26716 Brassica carinata HOM05D000622 ORTHO05D000475 7.1e-28 128.6 421 36.3
Sp3g22740 Schrenkiella parvula HOM05D000622 ORTHO05D000475 4.3e-25 119.4 424 35.4
Thhalv10002500m.g Eutrema salsugineum HOM05D000622 ORTHO05D000475 1.0e-21 108.2 432 31.9
BcaC06g35786 Brassica carinata HOM05D000622 ORTHO05D000475 1.4e-20 104.4 437 29.7
AL26U10020 Arabidopsis lyrata HOM05D000622 ORTHO05D000475 7.2e-20 102.1 420 33.6
BolC7t41556H Brassica oleracea HOM05D000622 ORTHO05D000475 1.4e-18 97.8 435 29.2
AT3G25150 Arabidopsis thaliana HOM05D000622 ORTHO05D000475 5.0e-13 79.3 422 32.2
A07p07210 Brassica napus HOM05D000622 ORTHO05D000475 5.5e-12 75.9 160 38.1
BraA07t28507Z Brassica rapa HOM05D000622 ORTHO05D000475 5.5e-12 75.9 160 38.1
THA.LOC104821656 Tarenaya hassleriana HOM05D000622 ORTHO05D000475 2.7e-11 73.6 82 47.6
Aa31sc95G120 Aethionema arabicum HOM05D000622 ORTHO05D000475 1.0e-10 71.6 85 45.9
C07p10900 Brassica napus HOM05D000622 ORTHO05D000475 1.0e-10 71.6 448 26.1
THA.LOC104804628 Tarenaya hassleriana HOM05D000622 ORTHO05D000475 1.0e-10 71.6 75 50.7
Carub.0003s2548 Capsella rubella HOM05D000622 ORTHO05D000475 1.4e-10 71.2 354 25.7
CARHR101470 Cardamine hirsuta HOM05D000622 ORTHO05D000475 5.1e-10 69.3 424 28.8
Gohir.D08G057900 Gossypium hirsutum HOM05D000622 ORTHO05D000475 1.1e-07 61.6 97 39.2
Psat3g149680 Pisum sativum HOM05D000622 ORTHO05D000475 3.1e-07 60.1 105 38.1
Gohir.A08G047500 Gossypium hirsutum HOM05D000622 ORTHO05D000475 4.1e-07 59.7 96 38.5
Gorai.004G059100 Gossypium raimondii HOM05D000622 ORTHO05D000475 5.3e-07 59.3 97 38.1
Peaxi162Scf00991g00210 Petunia axillaris HOM05D000622 ORTHO05D000475 6.9e-07 58.9 65 47.7
Aqoxy3G00523 Aquilegia oxysepala HOM05D000622 ORTHO05D000475 1.2e-06 58.2 49 53.1
CAN.G1130.11 Capsicum annuum HOM05D000622 ORTHO05D000475 1.2e-06 58.2 50 54.0
COL.COLO4_08648 Corchorus olitorius HOM05D000622 ORTHO05D000475 1.5e-06 57.8 76 42.1
Duzib138G1496 Durio zibethinus HOM05D000622 ORTHO05D000475 1.5e-06 57.8 76 43.4
Medtr7g055610 Medicago truncatula HOM05D000622 ORTHO05D000475 2.0e-06 57.4 75 42.7
Medtr7g057520 Medicago truncatula HOM05D000622 ORTHO05D000475 2.0e-06 57.4 75 42.7
Sabra02G0187700 Salix brachista HOM05D000622 ORTHO05D000475 2.0e-06 57.4 126 30.2
Duzib133G1104 Durio zibethinus HOM05D000622 ORTHO05D000475 2.6e-06 57.0 76 42.1
Glyma.08G347800 Glycine max HOM05D000622 ORTHO05D000475 2.6e-06 57.0 75 41.3
Glyma.18G159100 Glycine max HOM05D000622 ORTHO05D000475 3.4e-06 56.6 75 41.3
QL09p050476 Quercus lobata HOM05D000622 ORTHO05D000475 3.4e-06 56.6 105 35.2
TWI18G1062 Tripterygium wilfordii HOM05D000622 ORTHO05D000475 3.4e-06 56.6 94 34.0
HPP92_006217 Vanilla planifolia HOM05D000622 ORTHO05D000475 3.4e-06 56.6 108 35.2
SalBow1G1760 Salvia bowleyana HOM05D000622 ORTHO05D000475 4.5e-06 56.2 44 56.8
Ca_03469_v3 Cicer arietinum L. HOM05D000622 ORTHO05D000475 5.9e-06 55.8 75 41.3
Dinv17425 Davidia involucrata HOM05D000622 ORTHO05D000475 5.9e-06 55.8 42 59.5
Duzib211G0378 Durio zibethinus HOM05D000622 ORTHO05D000475 5.9e-06 55.8 76 42.1
Lj2A1125T49 Lonicera japonica HOM05D000622 ORTHO05D000475 5.9e-06 55.8 82 40.2
Lalb_Chr19g0125881 Lupinus albus HOM05D000622 ORTHO05D000475 5.9e-06 55.8 73 39.7
Nitab4.5_0002957g0020 Nicotiana tabacum HOM05D000622 ORTHO05D000475 5.9e-06 55.8 59 50.8
Potri.002G246600 Populus trichocarpa HOM05D000622 ORTHO05D000475 5.9e-06 55.8 110 30.9
Atru.chr1.1102 Acer truncatum HOM05D000622 ORTHO05D002703 7.7e-06 55.5 54 51.9
Nitab4.5_0000212g0280 Nicotiana tabacum HOM05D000622 ORTHO05D000475 7.7e-06 55.5 59 47.5
TPR.G6411 Trifolium pratense HOM05D000622 ORTHO05D000475 7.7e-06 55.5 75 41.3


User provided reference genes

Program Settings