Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g30392 Brassica carinata HOM05D000513 ORTHO05D095093 3.3e-50 201.4 104 100.0
BolC5t35123H Brassica oleracea HOM05D000513 ORTHO05D005338 3.3e-50 201.4 104 100.0
A05p44780 Brassica napus HOM05D000513 ORTHO05D005338 1.4e-48 196.1 104 97.1
C09p75370 Brassica napus HOM05D000513 ORTHO05D005338 1.4e-48 196.1 104 99.0
BraA05t23179Z Brassica rapa HOM05D000513 ORTHO05D005338 1.4e-48 196.1 104 97.1
BcaC05g30487 Brassica carinata HOM05D000513 ORTHO05D005338 2.8e-41 171.8 103 87.4
Thhalv10020091m.g Eutrema salsugineum HOM05D000513 ORTHO05D005338 5.8e-39 164.1 105 86.7
Sp3g00920 Schrenkiella parvula HOM05D000513 ORTHO05D005338 1.1e-37 159.8 104 83.7
CARHR075860 Cardamine hirsuta HOM05D000513 ORTHO05D005338 3.0e-35 151.8 104 81.7
AL3G11070 Arabidopsis lyrata HOM05D000513 ORTHO05D005338 2.8e-33 145.2 105 80.0
Carub.0003s0097 Capsella rubella HOM05D000513 ORTHO05D005338 3.5e-28 128.3 105 77.1
BcaC09g47673 Brassica carinata HOM05D000513 ORTHO05D005338 9.6e-26 120.2 105 69.5
BNapus_Darmor_BZH_scaffold_97p00120 Brassica napus HOM05D000513 ORTHO05D005338 9.6e-26 120.2 105 69.5
AT3G01180 Arabidopsis thaliana HOM05D000513 ORTHO05D005338 1.6e-25 119.4 104 70.2
BolC1t05933H Brassica oleracea HOM05D000513 ORTHO05D005338 2.8e-25 118.6 105 68.6
Aa31LG5G12440 Aethionema arabicum HOM05D000513 ORTHO05D005338 2.2e-22 109.0 111 63.1
THA.LOC104822355 Tarenaya hassleriana HOM05D000513 ORTHO05D005338 1.6e-17 92.8 120 52.5


User provided reference genes

Program Settings