Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g27690 Brassica carinata HOM05D001038 ORTHO05D016716 1.7e-49 199.5 142 100.0
BraA08t34217Z Brassica rapa HOM05D001038 ORTHO05D016716 1.4e-35 153.3 161 65.8
BolC5t32403H Brassica oleracea HOM05D001038 ORTHO05D016716 4.1e-35 151.8 159 78.6
BcaC05g28787 Brassica carinata HOM05D001038 ORTHO05D016716 3.5e-34 148.7 165 53.3
C06p18900 Brassica napus HOM05D001038 ORTHO05D016716 1.5e-32 143.3 76 90.8
BcaC08g44444 Brassica carinata HOM05D001038 ORTHO05D016716 3.2e-32 142.1 74 91.9
BcaC03g15830 Brassica carinata HOM05D001038 ORTHO05D016716 2.3e-17 92.8 74 62.2
BcaC06g36746 Brassica carinata HOM05D001038 ORTHO05D010763 1.5e-16 90.1 75 60.0
BolC7t40492H Brassica oleracea HOM05D001038 ORTHO05D010763 2.5e-16 89.4 70 62.9
C05p48930 Brassica napus HOM05D001038 ORTHO05D016716 7.2e-16 87.8 79 57.0
BolC5t33633H Brassica oleracea HOM05D001038 ORTHO05D016716 7.2e-16 87.8 79 57.0
BcaC08g46990 Brassica carinata HOM05D025413 ORTHO05D021599 2.8e-15 85.9 72 55.6
BcaB08g35144 Brassica carinata HOM05D001038 ORTHO05D021599 3.6e-15 85.5 76 56.6
BraA10t43039Z Brassica rapa HOM05D001038 ORTHO05D000395 3.6e-15 85.5 65 64.6
BcaB07g32567 Brassica carinata HOM05D001038 ORTHO05D010763 6.1e-15 84.7 64 62.5
A04p22180 Brassica napus HOM05D001038 ORTHO05D000395 1.0e-14 84.0 65 63.1
BolC9t58942H Brassica oleracea HOM05D001038 ORTHO05D010763 4.0e-14 82.0 70 57.1
A03p31860 Brassica napus HOM05D001038 ORTHO05D024045 3.4e-13 79.0 69 53.6
A03p51100 Brassica napus HOM05D001038 ORTHO05D024045 3.4e-13 79.0 69 53.6
C07p13440 Brassica napus HOM05D001038 ORTHO05D016703 5.7e-13 78.2 66 59.1
BolC7t41839H Brassica oleracea HOM05D001038 ORTHO05D016703 5.7e-13 78.2 66 59.1
BcaC06g35568 Brassica carinata HOM05D001038 ORTHO05D016703 7.5e-13 77.8 66 59.1
BcaC04g21625 Brassica carinata HOM05D001038 ORTHO05D016703 9.8e-13 77.4 67 61.2
BolC9t55839H Brassica oleracea HOM05D001038 ORTHO05D016703 9.8e-13 77.4 67 61.2
BcaC08g44142 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-12 77.0 74 51.4
BcaC06g35698 Brassica carinata HOM05D001038 ORTHO05D031981 3.7e-12 75.5 57 61.4
C07p11920 Brassica napus HOM05D001038 ORTHO05D031981 6.3e-12 74.7 56 62.5
BcaB08g36820 Brassica carinata HOM05D001038 ORTHO05D016703 1.1e-11 73.9 66 54.5
C07p11760 Brassica napus HOM05D001038 ORTHO05D024045 1.1e-11 73.9 69 50.7
C09p60390 Brassica napus HOM05D001038 ORTHO05D016703 1.1e-11 73.9 66 54.5
BcaB01g01349 Brassica carinata HOM05D001038 ORTHO05D096136 4.5e-10 68.6 72 52.8
BraA10t43660Z Brassica rapa HOM05D025413 ORTHO05D021599 5.9e-10 68.2 54 66.7
C07p34820 Brassica napus HOM05D001038 ORTHO05D000395 2.3e-09 66.2 64 50.0
BraA06t24545Z Brassica rapa HOM05D001038 ORTHO05D024045 5.0e-09 65.1 69 47.8
BcaB01g01698 Brassica carinata HOM05D001038 ORTHO05D016716 1.5e-08 63.5 42 71.4
BcaB07g33632 Brassica carinata HOM05D001038 ORTHO05D016703 3.3e-08 62.4 64 51.6
BcaB07g32737 Brassica carinata HOM05D001038 ORTHO05D000395 7.3e-08 61.2 57 49.1
BcaC06g35713 Brassica carinata HOM05D001038 ORTHO05D024045 9.5e-08 60.8 44 61.4
BcaC05g24336 Brassica carinata HOM05D001038 ORTHO05D016776 4.7e-07 58.5 59 50.8
C04p40350 Brassica napus HOM05D001038 ORTHO05D016776 8.0e-07 57.8 57 52.6
BolC4t25613H Brassica oleracea HOM05D001038 ORTHO05D016776 8.0e-07 57.8 57 52.6
BraSC37t46126Z Brassica rapa HOM05D001038 ORTHO05D016776 8.0e-07 57.8 66 47.0
BcaB05g22095 Brassica carinata HOM05D001038 ORTHO05D016776 1.0e-06 57.4 57 50.9
A10p08770 Brassica napus HOM05D001038 ORTHO05D016776 1.4e-06 57.0 66 47.0
BcaB05g23462 Brassica carinata HOM05D001038 ORTHO05D091267 1.8e-06 56.6 59 49.2
BcaC07g39263 Brassica carinata HOM05D001038 ORTHO05D016776 2.3e-06 56.2 66 47.0
C08p22730 Brassica napus HOM05D001038 ORTHO05D016776 2.3e-06 56.2 66 47.0
BolC4t27749H Brassica oleracea HOM05D001038 ORTHO05D016776 2.3e-06 56.2 66 47.0
BcaB01g01825 Brassica carinata HOM05D001038 ORTHO05D000395 4.0e-06 55.5 57 49.1
BcaC01g03622 Brassica carinata HOM05D001038 ORTHO05D016776 5.2e-06 55.1 66 45.5
BcaC08g46850 Brassica carinata HOM05D001038 ORTHO05D000395 6.8e-06 54.7 57 49.1


User provided reference genes

Program Settings