Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g27075 Brassica carinata HOM05D004315 ORTHO05D005089 1.6e-205 719.2 355 100.0
BolC5t31687H Brassica oleracea HOM05D004315 ORTHO05D005089 3.9e-204 714.5 356 99.7
C05p29560 Brassica napus HOM05D004315 ORTHO05D005089 2.6e-203 711.8 356 99.2
A09p35900 Brassica napus HOM05D004315 ORTHO05D005089 1.2e-192 676.4 356 95.5
BraA09t39115Z Brassica rapa HOM05D004315 ORTHO05D005089 4.2e-190 667.9 356 94.7
BcaB07g32690 Brassica carinata HOM05D004315 ORTHO05D005089 5.5e-190 667.5 356 93.8
AT1G30540 Arabidopsis thaliana HOM05D004315 ORTHO05D005089 2.6e-179 632.1 350 89.7
CARHR029950 Cardamine hirsuta HOM05D004315 ORTHO05D005089 7.5e-179 630.6 352 88.6
AL1G44580 Arabidopsis lyrata HOM05D004315 ORTHO05D005089 9.8e-179 630.2 350 89.7
Thhalv10008046m.g Eutrema salsugineum HOM05D004315 ORTHO05D005089 4.9e-178 627.9 353 88.7
Sp1g26410 Schrenkiella parvula HOM05D004315 ORTHO05D005089 1.8e-177 625.9 361 88.4
BcaB07g32692 Brassica carinata HOM05D004315 ORTHO05D005089 3.5e-176 621.7 360 89.2
Carub.0001s2880 Capsella rubella HOM05D004315 ORTHO05D005089 1.3e-175 619.8 348 88.5
Aa31LG10G6590 Aethionema arabicum HOM05D004315 ORTHO05D005089 3.0e-159 565.5 362 78.5
BcaB07g32666 Brassica carinata HOM05D004315 ORTHO05D005089 4.7e-157 558.1 357 82.9
THA.LOC104798598 Tarenaya hassleriana HOM05D004315 ORTHO05D005089 9.2e-153 543.9 393 72.5
Potri.001G466900 Populus trichocarpa HOM05D004315 ORTHO05D005089 1.2e-144 516.9 345 73.6
Cpa.g.sc1123.2 Carica papaya HOM05D004315 ORTHO05D005089 2.7e-144 515.8 333 75.7
Potri.011G164500 Populus trichocarpa HOM05D004315 ORTHO05D005089 8.7e-143 510.8 346 73.7
Sabra16G0316700 Salix brachista HOM05D004315 ORTHO05D005089 4.7e-141 505.0 369 69.1
Cfa000809 Carpinus fangiana HOM05D004315 ORTHO05D005089 1.4e-140 503.4 354 70.9
TAR629G1010 Trochodendron aralioides HOM05D004315 ORTHO05D005089 5.3e-140 501.5 330 72.4
CiPaw.10G109400 Carya illinoinensis HOM05D004315 ORTHO05D005089 6.4e-138 494.6 350 69.7
Sabra11G0140700 Salix brachista HOM05D004315 ORTHO05D005089 8.4e-138 494.2 382 67.3
GSVIVG01020802001 Vitis vinifera HOM05D004315 ORTHO05D005089 1.1e-137 493.8 343 70.6
MD17G1131300 Malus domestica HOM05D004315 ORTHO05D005089 1.4e-137 493.4 319 73.7
Duzib264G0097 Durio zibethinus HOM05D004315 ORTHO05D005089 3.2e-137 492.3 317 74.8
CANSAT35G0713 Cannabis sativa HOM05D004315 ORTHO05D005089 7.1e-137 491.1 338 71.6
Dinv05044 Davidia involucrata HOM05D004315 ORTHO05D005089 7.1e-137 491.1 322 73.9
Gohir.A05G380500 Gossypium hirsutum HOM05D004315 ORTHO05D005089 7.1e-137 491.1 317 74.4
Gorai.012G039600 Gossypium raimondii HOM05D004315 ORTHO05D005089 2.7e-136 489.2 317 74.1
Thecc.01G165100 Theobroma cacao HOM05D004315 ORTHO05D005089 2.7e-136 489.2 319 74.0
CSS0039894 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 3.5e-136 488.8 353 68.3
MD09G1144800 Malus domestica HOM05D004315 ORTHO05D005089 3.5e-136 488.8 343 69.4
Potri.014G143500 Populus trichocarpa HOM05D004315 ORTHO05D005089 1.3e-135 486.9 323 70.9
vmacro03380 Vaccinium macrocarpon HOM05D004315 ORTHO05D005089 1.3e-135 486.9 347 69.7
PSO675G7088 Papaver somniferum HOM05D004315 ORTHO05D005089 1.7e-135 486.5 347 68.0
TPR.G24734 Trifolium pratense HOM05D004315 ORTHO05D005089 2.3e-135 486.1 350 68.0
ClCG07G010830 Citrullus lanatus HOM05D004315 ORTHO05D005089 5.1e-135 485.0 348 69.5
RcHm_v2.0_Chr2g0152961 Rosa chinensis HOM05D004315 ORTHO05D005089 8.7e-135 484.2 346 68.8
Eucgr.A00888 Eucalyptus grandis HOM05D004315 ORTHO05D005089 1.1e-134 483.8 323 71.8
Prupe.3G183100 Prunus persica HOM05D004315 ORTHO05D005089 1.1e-134 483.8 323 72.4
ATR0165G021 Amborella trichopoda HOM05D004315 ORTHO05D005089 1.9e-134 483.0 322 72.4
CiPaw.03G190700 Carya illinoinensis HOM05D004315 ORTHO05D005089 1.9e-134 483.0 343 69.1
Glyma.02G281300 Glycine max HOM05D004315 ORTHO05D005089 2.5e-134 482.6 344 68.3
Lj2A329G54 Lonicera japonica HOM05D004315 ORTHO05D005089 2.5e-134 482.6 335 70.4
Nn3g20219 Nelumbo nucifera HOM05D004315 ORTHO05D005089 2.5e-134 482.6 327 71.9
TWI14G0586 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 5.6e-134 481.5 323 70.9
MBI18_g11296_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 9.6e-134 480.7 324 72.2
Oeu015176.1 Olea europaea HOM05D004315 ORTHO05D005089 2.1e-133 479.6 330 70.6
SalBow8G0183 Salvia bowleyana HOM05D004315 ORTHO05D005089 2.8e-133 479.2 328 70.1
MBI02_g32064_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 3.6e-133 478.8 324 71.0
GSVIVG01021661001 Vitis vinifera HOM05D004315 ORTHO05D005089 3.6e-133 478.8 349 68.8
FAN05G3231 Fragaria x ananassa HOM05D004315 ORTHO05D005089 4.8e-133 478.4 343 67.9
Aqoxy1G01576 Aquilegia oxysepala HOM05D004315 ORTHO05D005089 6.2e-133 478.0 338 69.5
FvH4_6g39150 Fragaria vesca HOM05D004315 ORTHO05D005089 6.2e-133 478.0 347 67.7
FAN14G1093 Fragaria x ananassa HOM05D004315 ORTHO05D005089 6.2e-133 478.0 347 67.7
Oeu041105.1 Olea europaea HOM05D004315 ORTHO05D005089 6.2e-133 478.0 323 71.2
TWI59G1372 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 1.1e-132 477.2 323 69.7
PGR031G0720 Punica granatum HOM05D004315 ORTHO05D005089 1.4e-132 476.9 348 68.1
Psat2g018080 Pisum sativum HOM05D004315 ORTHO05D005089 1.8e-132 476.5 340 68.5
MSTRG.16294 Avicennia marina HOM05D004315 ORTHO05D005089 2.4e-132 476.1 328 70.7
CANSAT64G0449 Cannabis sativa HOM05D004315 ORTHO05D005089 3.1e-132 475.7 318 72.0
Hma1.2p1_0583F.1_g183050 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 3.1e-132 475.7 319 71.8
CSS0023242 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 5.3e-132 474.9 354 68.1
arahy.Tifrunner.gnm1.ann1.8V1VF7 Arachis hypogaea HOM05D004315 ORTHO05D005089 6.9e-132 474.6 346 67.3
Migut.M01899 Erythranthe guttata HOM05D004315 ORTHO05D005089 9.0e-132 474.2 321 71.7
Medtr5g090130 Medicago truncatula HOM05D004315 ORTHO05D005089 2.0e-131 473.0 321 72.0
Ciclev10031991m.g Citrus clementina HOM05D004315 ORTHO05D005089 2.6e-131 472.6 341 69.2
Rhsim13G0121900 Rhododendron simsii HOM05D004315 ORTHO05D005089 4.5e-131 471.9 373 64.9
LjContig00049g0028236 Lotus japonicus HOM05D004315 ORTHO05D005089 2.2e-130 469.5 342 66.7
Nitab4.5_0000076g0250 Nicotiana tabacum HOM05D004315 ORTHO05D005089 2.9e-130 469.2 330 70.0
Cc09_g07890 Coffea canephora HOM05D004315 ORTHO05D005089 4.9e-130 468.4 319 71.2
DCAR_013332 Daucus carota HOM05D004315 ORTHO05D005089 4.9e-130 468.4 347 66.9
MELO3C016194.2 Cucumis melo HOM05D004315 ORTHO05D005089 8.4e-130 467.6 349 67.6
Sabra14G0108500 Salix brachista HOM05D004315 ORTHO05D005089 8.4e-130 467.6 334 68.0
Gohir.D04G035100 Gossypium hirsutum HOM05D004315 ORTHO05D005089 1.4e-129 466.8 304 73.4
Solyc02g023980.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 5.4e-129 464.9 332 68.7
Dinv10789 Davidia involucrata HOM05D004315 ORTHO05D005089 7.1e-129 464.5 315 72.7
PSO541G6471 Papaver somniferum HOM05D004315 ORTHO05D005089 7.1e-129 464.5 332 67.2
arahy.Tifrunner.gnm1.ann1.VQL6P1 Arachis hypogaea HOM05D004315 ORTHO05D005089 9.3e-129 464.2 353 65.7
CsaV3_4G007480 Cucumis sativus L. HOM05D004315 ORTHO05D005089 1.2e-128 463.8 349 66.2
HanXRQChr01g0023901 Helianthus annuus HOM05D004315 ORTHO05D005089 1.2e-128 463.8 324 70.7
Lsat_1_v5_gn_1_91760 Lactuca sativa HOM05D004315 ORTHO05D005089 1.6e-128 463.4 329 67.5
Nitab4.5_0001843g0170 Nicotiana tabacum HOM05D004315 ORTHO05D005089 2.1e-128 463.0 349 65.6
Cc05_g00540 Coffea canephora HOM05D004315 ORTHO05D005089 2.7e-128 462.6 357 65.3
Lalb_Chr10g0106401 Lupinus albus HOM05D004315 ORTHO05D005089 4.6e-128 461.8 320 68.8
Solyc07g044750.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 7.9e-128 461.1 350 66.0
Sopen07g023340 Solanum pennellii HOM05D004315 ORTHO05D005089 1.0e-127 460.7 349 66.2
Atru.chr10.841 Acer truncatum HOM05D004315 ORTHO05D005089 1.3e-127 460.3 329 69.9
MELO3C026388.2 Cucumis melo HOM05D004315 ORTHO05D005089 1.3e-127 460.3 324 69.4
ECA248G0068 Erigeron canadensis HOM05D004315 ORTHO05D005089 3.9e-127 458.8 335 69.0
COL.COLO4_29897 Corchorus olitorius HOM05D004315 ORTHO05D005089 5.1e-127 458.4 301 73.4
CAN.G1316.2 Capsicum annuum HOM05D004315 ORTHO05D005089 6.7e-127 458.0 332 68.1
CAN.G304.4 Capsicum annuum HOM05D004315 ORTHO05D005089 8.7e-127 457.6 332 69.0
PGSC0003DMG400021156 Solanum tuberosum HOM05D004315 ORTHO05D005089 8.7e-127 457.6 364 63.7
CDE05G3605 Ceratophyllum demersum HOM05D003391 ORTHO05D005563 1.1e-126 457.2 336 67.0
Peaxi162Scf00351g00818 Petunia axillaris HOM05D004315 ORTHO05D005089 2.5e-126 456.1 319 69.0
Phvul.008G199600 Phaseolus vulgaris HOM05D004315 ORTHO05D005089 2.5e-126 456.1 343 66.2
SGA_v2.0_scaffold223G42867 Striga asiatica HOM05D004315 ORTHO05D005089 5.6e-126 454.9 359 63.0
Lsat_1_v5_gn_2_30700 Lactuca sativa HOM05D004315 ORTHO05D005089 7.4e-126 454.5 329 68.7
Oeu044867.2 Olea europaea HOM05D004315 ORTHO05D005089 1.3e-125 453.8 337 66.8
HanXRQChr04g0115031 Helianthus annuus HOM05D004315 ORTHO05D005089 8.1e-125 451.1 329 67.5
VMungo0647G0619 Vigna mungo HOM05D004315 ORTHO05D005089 8.1e-125 451.1 343 64.7
Nitab4.5_0011274g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 1.4e-124 450.3 305 71.1
Sed0001791 Sechium edule HOM05D004315 ORTHO05D005089 1.2e-123 447.2 324 67.6
Peaxi162Scf00395g00318 Petunia axillaris HOM05D004315 ORTHO05D005089 2.0e-123 446.4 318 69.5
HanXRQChr14g0432981 Helianthus annuus HOM05D004315 ORTHO05D005089 3.4e-123 445.7 319 68.0
Ah.09g232250 Amaranthus hybridus HOM05D004315 ORTHO05D005089 1.7e-122 443.4 337 65.3
Migut.H01268 Erythranthe guttata HOM05D004315 ORTHO05D005089 1.7e-122 443.4 319 66.5
HPP92_005880 Vanilla planifolia HOM05D004315 ORTHO05D005089 2.9e-122 442.6 345 66.4
DCAR_007839 Daucus carota HOM05D004315 ORTHO05D005089 3.8e-122 442.2 333 66.7
PGSC0003DMG401028079 Solanum tuberosum HOM05D004315 ORTHO05D005089 2.5e-121 439.5 307 69.1
unitig_37.g12072 Utricularia gibba HOM05D004315 ORTHO05D005089 3.2e-121 439.1 336 64.0
Nitab4.5_0006724g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 9.3e-121 437.6 330 64.8
SEGI_10868 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 6.0e-120 434.9 319 67.7
ClCG11G016660 Citrullus lanatus HOM05D004315 ORTHO05D005089 1.8e-119 433.3 379 59.4
Zm00001eb261810 Zea mays HOM05D004315 ORTHO05D005089 3.0e-119 432.6 316 67.4
Os09g0133700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 5.1e-119 431.8 332 65.4
Zm00001eb299940 Zea mays HOM05D004315 ORTHO05D005089 9.6e-118 427.6 325 65.5
Lj1A584G30 Lonicera japonica HOM05D004315 ORTHO05D005089 1.8e-116 423.3 341 62.5
Os07g0147700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 6.9e-116 421.4 327 64.8
QL05p061983 Quercus lobata HOM05D004315 ORTHO05D005089 1.1e-113 414.1 538 45.4
Actinidia12522 Actinidia chinensis HOM05D004315 ORTHO05D005089 1.4e-113 413.7 322 64.3
SHI10516 Sapria himalayana HOM05D004315 ORTHO05D005089 9.3e-113 411.0 317 63.7
Manes.02G090600 Manihot esculenta HOM05D004315 ORTHO05D005089 5.1e-111 405.2 269 73.6
Duzib147G0966 Durio zibethinus HOM05D004315 ORTHO05D005089 2.4e-108 396.4 317 61.8
Sed0020733 Sechium edule HOM05D004315 ORTHO05D005089 1.4e-105 387.1 266 72.2
Atru.chr6.2011 Acer truncatum HOM05D004315 ORTHO05D005089 2.1e-104 383.3 253 72.3
Glyma.14G033300 Glycine max HOM05D004315 ORTHO05D005089 2.7e-104 382.9 267 70.0
CsaV3_4G032170 Cucumis sativus L. HOM05D004315 ORTHO05D005089 1.5e-99 367.1 324 58.0
Haze_05864 Corylus avellana HOM05D004315 ORTHO05D005089 3.5e-91 339.3 281 62.6
Manes.14G123700 Manihot esculenta HOM05D004315 ORTHO05D005089 1.3e-90 337.4 232 68.5
Lsat_1_v5_gn_1_77721 Lactuca sativa HOM05D004315 ORTHO05D005089 5.0e-90 335.5 226 72.6
Mapoly0122s0046 Marchantia polymorpha HOM05D004315 ORTHO05D005089 8.5e-90 334.7 331 53.2
Hma1.2p1_0067F.1_g036960 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 1.2e-88 330.9 206 75.2
SMO334G0132 Selaginella moellendorffii HOM05D004315 ORTHO05D005089 2.7e-88 329.7 322 51.9
Haze_05859 Corylus avellana HOM05D004315 ORTHO05D005089 2.8e-85 319.7 267 62.2
Sopen02g006690 Solanum pennellii HOM05D004315 ORTHO05D005089 5.3e-84 315.5 210 75.7
Actinidia01578 Actinidia chinensis HOM05D004315 ORTHO05D005089 7.7e-83 311.6 216 69.0
Pp3c17_6390 Physcomitrium patens HOM05D004315 ORTHO05D005089 3.2e-81 306.2 286 53.8
Sc10g0005420 Simmondsia chinensis HOM05D004315 ORTHO05D005089 1.6e-80 303.9 236 65.3
Haze_13622 Corylus avellana HOM05D004315 ORTHO05D005089 3.2e-73 279.6 163 82.8
CBR_g20100 Chara braunii HOM05D004315 ORTHO05D005089 1.4e-68 264.2 375 42.1
Cfa023542 Carpinus fangiana HOM05D004315 ORTHO05D005089 1.3e-61 241.1 183 64.5
Hund21564 Selenicereus undatus HOM05D004315 ORTHO05D005089 3.7e-61 239.6 166 68.7
QL05p062039 Quercus lobata HOM05D004315 ORTHO05D005089 6.6e-58 228.8 144 77.8
Hund21563 Selenicereus undatus HOM05D004315 ORTHO05D005089 1.1e-57 228.0 158 71.5
Actinidia33709 Actinidia chinensis HOM05D004315 ORTHO05D005089 9.5e-57 224.9 161 72.0
Zm00001eb058170 Zea mays HOM05D004315 ORTHO05D005089 6.0e-51 205.7 162 62.3
PRCOL_00003495 Prasinoderma coloniale HOM05D004315 ORTHO05D005089 7.3e-49 198.7 325 39.7
AagrBONN_evm.TU.Sc2ySwM_117.2193 Anthoceros agrestis HOM05D004315 ORTHO05D005089 1.7e-45 187.6 256 43.0
Manes.01G131701 Manihot esculenta HOM05D004315 ORTHO05D005089 1.6e-43 181.0 119 66.4
TPR.G1178 Trifolium pratense HOM05D003586 ORTHO05D004036 1.6e-43 181.0 189 52.4
Manes.01G131702 Manihot esculenta HOM05D004315 ORTHO05D005089 1.2e-30 138.3 107 69.2
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 2.9e-29 133.7 305 32.8
Cre17.g720528 Chlamydomonas reinhardtii HOM05D004315 ORTHO05D005089 2.4e-28 130.6 248 33.1
MCO07G054 Micromonas commoda HOM05D004315 ORTHO05D005089 1.2e-27 128.3 383 30.0
SEGI_40766 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 9.6e-25 118.6 109 49.5
QL04p059944 Quercus lobata HOM05D004315 ORTHO05D005089 1.6e-24 117.9 65 84.6
SEGI_21833 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 3.1e-23 113.6 128 50.0
Cfa023541 Carpinus fangiana HOM05D004315 ORTHO05D005089 1.9e-17 94.4 56 82.1
Hma1.2p1_0067F.1_g036930 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 7.3e-17 92.4 57 75.4
DCAR_009744 Daucus carota HOM05D004315 ORTHO05D018839 5.3e-15 86.3 91 46.2
Atru.chr6.2012 Acer truncatum HOM05D004315 ORTHO05D005089 2.0e-14 84.3 57 71.9
TAR624G0620 Trochodendron aralioides HOM05D004315 ORTHO05D005089 2.7e-11 73.9 60 60.0
Ah.03g146620 Amaranthus hybridus HOM05D004315 ORTHO05D005089 7.9e-11 72.4 59 57.6
CDE04G1567 Ceratophyllum demersum HOM05D001307 ORTHO05D005089 4.8e-08 63.2 100 42.0


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