Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g25183 Brassica carinata HOM05D001038 ORTHO05D000395 2.1e-61 238.8 115 100.0
BcaNung02449 Brassica carinata HOM05D001038 ORTHO05D000395 1.7e-60 235.7 115 99.1
BolC3t20321H Brassica oleracea HOM05D001038 ORTHO05D000395 5.0e-23 111.3 76 69.7
BcaNung02282 Brassica carinata HOM05D001038 ORTHO05D000395 4.2e-22 108.2 101 53.5
BcaC01g04980 Brassica carinata HOM05D001038 ORTHO05D000395 2.1e-21 105.9 76 65.8
BolC3t16968H Brassica oleracea HOM05D001038 ORTHO05D000395 6.1e-21 104.4 70 71.4
C07p60310 Brassica napus HOM05D001038 ORTHO05D000395 7.9e-21 104.0 76 65.8
BolC7t44786H Brassica oleracea HOM05D001038 ORTHO05D000395 2.3e-20 102.4 77 66.2
C09p68940 Brassica napus HOM05D001038 ORTHO05D000395 3.0e-20 102.1 77 66.2
BcaB08g34364 Brassica carinata HOM05D001038 ORTHO05D000395 7.7e-16 87.4 71 54.9
C09p22250 Brassica napus HOM05D001038 ORTHO05D000395 8.5e-15 84.0 71 54.9
BcaC05g28246 Brassica carinata HOM05D001038 ORTHO05D031796 1.1e-14 83.6 71 54.9
BolC5t33633H Brassica oleracea HOM05D001038 ORTHO05D016716 1.1e-14 83.6 90 44.4
A05p23600 Brassica napus HOM05D001038 ORTHO05D018589 1.4e-14 83.2 75 52.0
BraA05t21228Z Brassica rapa HOM05D001038 ORTHO05D018589 1.4e-14 83.2 75 52.0
BolC4t27362H Brassica oleracea HOM05D001038 ORTHO05D000395 2.5e-14 82.4 75 50.7
BcaB05g21586 Brassica carinata HOM05D001038 ORTHO05D000395 3.2e-14 82.0 70 52.9
BcaC06g33888 Brassica carinata HOM05D001038 ORTHO05D017617 3.2e-14 82.0 71 54.9
C01p40340 Brassica napus HOM05D001038 ORTHO05D000395 3.2e-14 82.0 70 55.7
BolC1t03990H Brassica oleracea HOM05D001038 ORTHO05D000395 3.2e-14 82.0 70 55.7
BcaC09g51573 Brassica carinata HOM05D001038 ORTHO05D000395 7.2e-14 80.9 71 53.5
BolC6t37790H Brassica oleracea HOM05D001038 ORTHO05D000395 2.1e-13 79.3 71 53.5
BcaB06g28542 Brassica carinata HOM05D001038 ORTHO05D000395 2.7e-13 79.0 66 57.6
C06p03930 Brassica napus HOM05D001038 ORTHO05D000395 3.6e-13 78.6 85 48.2
BraA05t20300Z Brassica rapa HOM05D001038 ORTHO05D000395 7.9e-13 77.4 86 47.7
BcaC08g46850 Brassica carinata HOM05D001038 ORTHO05D000395 1.0e-12 77.0 75 46.7
C05p38680 Brassica napus HOM05D001038 ORTHO05D000395 1.0e-12 77.0 68 48.5
BcaC08g47005 Brassica carinata HOM05D001038 ORTHO05D000395 1.4e-12 76.6 90 45.6
C09p60390 Brassica napus HOM05D001038 ORTHO05D016703 1.4e-12 76.6 75 45.3
BolC6t36762H Brassica oleracea HOM05D001038 ORTHO05D000395 1.4e-12 76.6 75 46.7
C03p74230 Brassica napus HOM05D001038 ORTHO05D000395 1.8e-12 76.3 86 47.7
BcaB04g19295 Brassica carinata HOM05D001038 ORTHO05D000395 2.3e-12 75.9 90 44.4
BcaC07g37762 Brassica carinata HOM05D001038 ORTHO05D000395 2.3e-12 75.9 89 44.9
BolC8t48147H Brassica oleracea HOM05D001038 ORTHO05D000395 2.3e-12 75.9 89 44.9
BraA04t18197Z Brassica rapa HOM05D001038 ORTHO05D000395 2.3e-12 75.9 75 46.7
BcaC03g15415 Brassica carinata HOM05D001038 ORTHO05D000395 3.0e-12 75.5 90 45.6
BcaC08g46980 Brassica carinata HOM05D001038 ORTHO05D000395 3.0e-12 75.5 79 46.8
BcaC04g20742 Brassica carinata HOM05D001038 ORTHO05D010763 3.9e-12 75.1 90 46.7
C09p39690 Brassica napus HOM05D001038 ORTHO05D000395 3.9e-12 75.1 90 46.7
BolC9t56849H Brassica oleracea HOM05D001038 ORTHO05D000395 3.9e-12 75.1 90 46.7
BraA06t25413Z Brassica rapa HOM05D001038 ORTHO05D000395 5.1e-12 74.7 90 44.4
BcaB08g34623 Brassica carinata HOM05D001038 ORTHO05D000395 6.7e-12 74.3 70 50.0
A01p24490 Brassica napus HOM05D001038 ORTHO05D021947 8.8e-12 73.9 85 44.7
BcaB01g00832 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-11 73.6 90 43.3
BcaB07g30174 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-11 73.6 90 44.4
BolC2t07185H Brassica oleracea HOM05D001038 ORTHO05D000395 1.1e-11 73.6 75 46.7
BolC7t41881H Brassica oleracea HOM05D001038 ORTHO05D000395 1.1e-11 73.6 76 50.0
Thhalv10002975m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 1.1e-11 73.6 68 54.4
BolC3t19681H Brassica oleracea HOM05D001038 ORTHO05D000395 1.5e-11 73.2 86 46.5
BraA05t20013Z Brassica rapa HOM05D001038 ORTHO05D000395 1.5e-11 73.2 86 45.3
BcaB08g35415 Brassica carinata HOM05D001038 ORTHO05D000395 2.0e-11 72.8 85 43.5
BraA05t19810Z Brassica rapa HOM05D001038 ORTHO05D016703 2.5e-11 72.4 86 40.7
BcaB06g27965 Brassica carinata HOM05D001038 ORTHO05D000395 3.3e-11 72.0 90 41.1
BcaB02g10939 Brassica carinata HOM05D001038 ORTHO05D000395 4.3e-11 71.6 90 43.3
BolC7t41688H Brassica oleracea HOM05D001038 ORTHO05D000395 5.7e-11 71.2 78 43.6
BcaC03g17929 Brassica carinata HOM05D001038 ORTHO05D000395 7.4e-11 70.9 85 42.4
A02p27290 Brassica napus HOM05D001038 ORTHO05D000395 9.7e-11 70.5 90 43.3
A04p22180 Brassica napus HOM05D001038 ORTHO05D000395 9.7e-11 70.5 75 41.3
BraA02t07755Z Brassica rapa HOM05D001038 ORTHO05D000395 9.7e-11 70.5 90 43.3
BraA10t43039Z Brassica rapa HOM05D001038 ORTHO05D000395 9.7e-11 70.5 75 41.3
BcaB06g26021 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-10 70.1 90 41.1
BcaC05g25823 Brassica carinata HOM05D001038 ORTHO05D014932 1.3e-10 70.1 75 45.3
BraA07t28816Z Brassica rapa HOM05D001038 ORTHO05D000395 1.3e-10 70.1 90 43.3
BcaB04g17766 Brassica carinata HOM05D001038 ORTHO05D000395 1.7e-10 69.7 85 42.4
BcaB02g10843 Brassica carinata HOM05D001038 ORTHO05D000395 2.2e-10 69.3 85 41.2
BcaB04g18537 Brassica carinata HOM05D001038 ORTHO05D000395 2.2e-10 69.3 90 43.3
A06p26760 Brassica napus HOM05D001038 ORTHO05D000395 2.2e-10 69.3 75 41.3
C07p13440 Brassica napus HOM05D001038 ORTHO05D016703 2.2e-10 69.3 86 38.4
BolC7t41839H Brassica oleracea HOM05D001038 ORTHO05D016703 2.2e-10 69.3 86 38.4
BolC8t49550H Brassica oleracea HOM05D001038 ORTHO05D000395 2.2e-10 69.3 75 42.7
BcaB06g26720 Brassica carinata HOM05D001038 ORTHO05D000395 2.8e-10 68.9 75 45.3
BcaC09g49287 Brassica carinata HOM05D001038 ORTHO05D000395 2.8e-10 68.9 93 39.8
C07p15560 Brassica napus HOM05D001038 ORTHO05D000395 2.8e-10 68.9 85 42.4
BolC7t42043H Brassica oleracea HOM05D001038 ORTHO05D000395 3.7e-10 68.6 85 42.4
BcaB03g16578 Brassica carinata HOM05D001038 ORTHO05D000395 4.8e-10 68.2 82 46.3
BcaB08g34565 Brassica carinata HOM05D001038 ORTHO05D000395 4.8e-10 68.2 90 42.2
C09p35780 Brassica napus HOM05D001038 ORTHO05D000395 4.8e-10 68.2 90 41.1
BolC9t56412H Brassica oleracea HOM05D001038 ORTHO05D000395 4.8e-10 68.2 90 41.1
A04p11380 Brassica napus HOM05D001038 ORTHO05D000395 6.3e-10 67.8 86 43.0
C02p45440 Brassica napus HOM05D001038 ORTHO05D000395 6.3e-10 67.8 86 43.0
BraA04t16800Z Brassica rapa HOM05D001038 ORTHO05D000395 6.3e-10 67.8 86 43.0
BcaC06g34271 Brassica carinata HOM05D001038 ORTHO05D000395 8.2e-10 67.4 75 44.0
BcaB03g12379 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-09 67.0 90 40.0
BcaB07g31487 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-09 67.0 90 41.1
BcaB01g00119 Brassica carinata HOM05D001038 ORTHO05D000395 2.4e-09 65.9 90 40.0
A09p58380 Brassica napus HOM05D001038 ORTHO05D000395 3.1e-09 65.5 38 76.3
BcaC09g50083 Brassica carinata HOM05D001038 ORTHO05D000395 5.3e-09 64.7 85 43.5
BcaB01g01124 Brassica carinata HOM05D001038 ORTHO05D000395 6.9e-09 64.3 90 40.0
BolC7t43636H Brassica oleracea HOM05D001038 ORTHO05D000395 6.9e-09 64.3 75 42.7
BolC8t47295H Brassica oleracea HOM05D001038 ORTHO05D000395 2.0e-08 62.8 85 42.4
BcaC04g22192 Brassica carinata HOM05D001038 ORTHO05D017617 3.4e-08 62.0 71 45.1
BcaC05g27733 Brassica carinata HOM05D001038 ORTHO05D000395 4.5e-08 61.6 90 40.0
C05p37210 Brassica napus HOM05D001038 ORTHO05D000395 4.5e-08 61.6 90 40.0
BolC3t15494H Brassica oleracea HOM05D001038 ORTHO05D010946 5.9e-08 61.2 38 73.7
Thhalv10011074m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 5.9e-08 61.2 62 46.8
A01p38280 Brassica napus HOM05D001038 ORTHO05D000395 7.7e-08 60.8 90 35.6
BraA09t41072Z Brassica rapa HOM05D001038 ORTHO05D000395 7.7e-08 60.8 90 35.6
BcaB01g02362 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-07 60.1 76 46.1
AL5G24460 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 2.2e-07 59.3 73 42.5
BcaNung00229 Brassica carinata HOM05D001038 ORTHO05D000395 2.2e-07 59.3 68 44.1
A10p07420 Brassica napus HOM05D001038 ORTHO05D000395 2.2e-07 59.3 77 42.9
C05p42760 Brassica napus HOM05D001038 ORTHO05D031796 3.8e-07 58.5 47 57.4
BolC5t32608H Brassica oleracea HOM05D001038 ORTHO05D000395 3.8e-07 58.5 52 48.1
AL3G41000 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 5.0e-07 58.2 73 41.1
BolC4t23574H Brassica oleracea HOM05D001038 ORTHO05D000395 5.0e-07 58.2 74 45.9
AL6G49460 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 6.5e-07 57.8 73 41.1
BcaC04g23074 Brassica carinata HOM05D001038 ORTHO05D019962 6.5e-07 57.8 81 39.5
BolC7t43509H Brassica oleracea HOM05D001038 ORTHO05D000395 8.5e-07 57.4 76 42.1
BcaC09g49024 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-06 57.0 67 46.3
BolC5t32403H Brassica oleracea HOM05D001038 ORTHO05D016716 1.1e-06 57.0 55 45.5
BraA02t06821Z Brassica rapa HOM05D001038 ORTHO05D000395 1.1e-06 57.0 70 41.4
BcaB01g01915 Brassica carinata HOM05D001038 ORTHO05D000395 1.4e-06 56.6 62 46.8
BraA08t34217Z Brassica rapa HOM05D001038 ORTHO05D016716 1.4e-06 56.6 51 51.0
BolC2t11347H Brassica oleracea HOM05D001038 ORTHO05D000395 1.9e-06 56.2 54 51.9
BolC7t41648H Brassica oleracea HOM05D001038 ORTHO05D000395 1.9e-06 56.2 63 44.4
BolC1t05514H Brassica oleracea HOM05D001038 ORTHO05D000395 2.5e-06 55.8 70 42.9
BcaB08g35558 Brassica carinata HOM05D001038 ORTHO05D000395 3.2e-06 55.5 70 41.4
CARHR034790 Cardamine hirsuta HOM05D001038 ORTHO05D000395 3.2e-06 55.5 68 38.2
BcaC01g02304 Brassica carinata HOM05D001038 ORTHO05D000395 4.2e-06 55.1 85 40.0
Carub.0013s0014 Capsella rubella HOM05D001038 ORTHO05D000395 5.5e-06 54.7 75 40.0


User provided reference genes

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