Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g23509 Brassica carinata HOM05D003762 ORTHO05D004374 2.0e-127 459.1 232 100.0
BolC9t53671H Brassica oleracea HOM05D003762 ORTHO05D004374 2.9e-123 445.3 229 98.3
C09p07550 Brassica napus HOM05D003762 ORTHO05D004374 1.4e-112 409.8 235 91.5
BraA09t36329Z Brassica rapa HOM05D003762 ORTHO05D004374 7.5e-103 377.5 229 84.7
A09p06830 Brassica napus HOM05D003762 ORTHO05D004374 1.1e-101 373.6 229 84.3
BcaB04g19852 Brassica carinata HOM05D003762 ORTHO05D004374 1.8e-96 356.3 230 82.6
BcaB04g19853 Brassica carinata HOM05D003762 ORTHO05D004374 1.8e-96 356.3 230 82.6
BcaNung01845 Brassica carinata HOM05D003762 ORTHO05D004374 1.9e-90 336.3 232 74.1
A06p34610 Brassica napus HOM05D003762 ORTHO05D004374 1.9e-90 336.3 232 74.1
C07p43880 Brassica napus HOM05D003762 ORTHO05D004374 1.9e-90 336.3 232 74.1
BolC7t44916H Brassica oleracea HOM05D003762 ORTHO05D004374 1.9e-90 336.3 232 74.1
BraA06t26389Z Brassica rapa HOM05D003762 ORTHO05D004374 1.9e-90 336.3 232 74.1
Sp2g23520 Schrenkiella parvula HOM05D003762 ORTHO05D004374 8.9e-88 327.4 232 72.0
Thhalv10005351m.g Eutrema salsugineum HOM05D003762 ORTHO05D004374 5.6e-82 308.1 234 68.8
Carub.0006s2146 Capsella rubella HOM05D003762 ORTHO05D004374 2.1e-73 279.6 232 64.2
AL6G34980 Arabidopsis lyrata HOM05D003762 ORTHO05D004374 2.0e-71 273.1 233 63.1
AT5G23710 Arabidopsis thaliana HOM05D003762 ORTHO05D004374 9.9e-71 270.8 233 61.4
CARHR189840 Cardamine hirsuta HOM05D003762 ORTHO05D004374 1.6e-65 253.4 233 57.1
THA.LOC104798921 Tarenaya hassleriana HOM05D003762 ORTHO05D004374 1.2e-57 227.3 234 52.1
Aa31sc38G110 Aethionema arabicum HOM05D003762 ORTHO05D004374 6.9e-56 221.5 231 50.2
Aa31LG11G3050 Aethionema arabicum HOM05D003762 ORTHO05D004374 3.2e-53 212.6 233 50.2
Duzib160G0900 Durio zibethinus HOM05D003762 ORTHO05D004374 2.1e-49 199.9 223 46.6
Potri.018G000800 Populus trichocarpa HOM05D003762 ORTHO05D004374 2.8e-49 199.5 231 45.9
Manes.04G114300 Manihot esculenta HOM05D003762 ORTHO05D004374 4.0e-48 195.7 232 44.8
Thecc.06G021200 Theobroma cacao HOM05D003762 ORTHO05D004374 5.3e-48 195.3 229 45.4
TWI36G0443 Tripterygium wilfordii HOM05D003762 ORTHO05D004374 6.9e-48 194.9 229 45.9
Ciclev10026399m.g Citrus clementina HOM05D003762 ORTHO05D004374 1.2e-47 194.1 234 45.7
Atru.chr1.3040 Acer truncatum HOM05D003762 ORTHO05D004374 2.0e-47 193.4 232 45.3
ClCG02G018290 Citrullus lanatus HOM05D003762 ORTHO05D004374 7.6e-47 191.4 229 45.0
QL01p011549 Quercus lobata HOM05D003762 ORTHO05D004374 1.3e-46 190.7 231 44.6
COL.COLO4_12944 Corchorus olitorius HOM05D003762 ORTHO05D004374 1.7e-46 190.3 229 42.4
Potri.001G003700 Populus trichocarpa HOM05D003762 ORTHO05D004374 1.7e-46 190.3 231 43.7
MSTRG.11877 Avicennia marina HOM05D003762 ORTHO05D004374 2.2e-46 189.9 228 46.5
Cpa.g.sc37.21 Carica papaya HOM05D003762 ORTHO05D004374 3.8e-46 189.1 232 44.0
Nn1g05222 Nelumbo nucifera HOM05D003762 ORTHO05D004374 3.8e-46 189.1 231 43.3
Sabra01G0002500 Salix brachista HOM05D003762 ORTHO05D004374 4.9e-46 188.7 231 43.3
CiPaw.09G152500 Carya illinoinensis HOM05D003762 ORTHO05D004374 6.4e-46 188.3 229 45.4
Migut.J01128 Erythranthe guttata HOM05D003762 ORTHO05D004374 6.4e-46 188.3 232 43.5
Cfa001979 Carpinus fangiana HOM05D003762 ORTHO05D004374 2.4e-45 186.4 231 43.7
ClCG00G001180 Citrullus lanatus HOM05D003762 ORTHO05D004374 5.4e-45 185.3 232 43.5
ClCG10G003800 Citrullus lanatus HOM05D003762 ORTHO05D004374 5.4e-45 185.3 232 43.5
Gohir.A02G058000 Gossypium hirsutum HOM05D003762 ORTHO05D004374 7.1e-45 184.9 232 43.1
Potri.003G033600 Populus trichocarpa HOM05D003762 ORTHO05D004374 7.1e-45 184.9 232 43.1
DCAR_002196 Daucus carota HOM05D003762 ORTHO05D004374 9.3e-45 184.5 232 42.7
TWI56G0980 Tripterygium wilfordii HOM05D003762 ORTHO05D004374 9.3e-45 184.5 229 43.7
GSVIVG01004444001 Vitis vinifera HOM05D003762 ORTHO05D004374 1.2e-44 184.1 232 46.1
CsaV3_3G003760 Cucumis sativus L. HOM05D003762 ORTHO05D004374 1.6e-44 183.7 232 44.0
Gorai.005G071700 Gossypium raimondii HOM05D003762 ORTHO05D004374 2.1e-44 183.3 232 42.2
Oeu056611.1 Olea europaea HOM05D003762 ORTHO05D004374 2.1e-44 183.3 225 44.9
MELO3C014058.2 Cucumis melo HOM05D003762 ORTHO05D004374 2.7e-44 183.0 232 44.0
Hma1.2p1_0515F.1_g170140 Hydrangea macrophylla HOM05D003762 ORTHO05D004374 7.9e-44 181.4 224 45.1
Cc08_g05300 Coffea canephora HOM05D003762 ORTHO05D004374 1.3e-43 180.6 235 41.7
Gohir.D02G063800 Gossypium hirsutum HOM05D003762 ORTHO05D004374 1.3e-43 180.6 232 41.8
Phvul.008G021700 Phaseolus vulgaris HOM05D003762 ORTHO05D004374 3.9e-43 179.1 219 42.5
Sed0000714 Sechium edule HOM05D003762 ORTHO05D004374 3.9e-43 179.1 214 43.9
SGA_v2.0_scaffold120G32921 Striga asiatica HOM05D003762 ORTHO05D004374 3.9e-43 179.1 229 45.4
Dinv08128 Davidia involucrata HOM05D003762 ORTHO05D004374 5.1e-43 178.7 222 45.0
VMungo1383G0008 Vigna mungo HOM05D003762 ORTHO05D004374 6.7e-43 178.3 219 42.5
ECA240G1229 Erigeron canadensis HOM05D003762 ORTHO05D004374 1.5e-42 177.2 231 42.9
arahy.Tifrunner.gnm1.ann1.IN3X4V Arachis hypogaea HOM05D003762 ORTHO05D004374 3.3e-42 176.0 219 42.0
CAN.G812.32 Capsicum annuum HOM05D003762 ORTHO05D004374 3.3e-42 176.0 230 43.9
Sed0021000 Sechium edule HOM05D003762 ORTHO05D004374 3.3e-42 176.0 229 41.9
Peaxi162Scf00053g00522 Petunia axillaris HOM05D003762 ORTHO05D004374 9.6e-42 174.5 229 42.8
arahy.Tifrunner.gnm1.ann1.VKA3KK Arachis hypogaea HOM05D003762 ORTHO05D004374 1.6e-41 173.7 219 41.6
GSVIVG01017309001 Vitis vinifera HOM05D003762 ORTHO05D004374 1.6e-41 173.7 229 45.0
CANSAT35G0296 Cannabis sativa HOM05D003762 ORTHO05D004374 2.8e-41 172.9 230 41.7
Glyma.18G279200 Glycine max HOM05D003762 ORTHO05D004374 2.8e-41 172.9 219 40.6
Lalb_Chr17g0343451 Lupinus albus HOM05D003762 ORTHO05D004374 3.7e-41 172.6 229 39.7
Prupe.1G576300 Prunus persica HOM05D003762 ORTHO05D004374 3.7e-41 172.6 229 44.5
Nitab4.5_0000255g0050 Nicotiana tabacum HOM05D003762 ORTHO05D004374 4.8e-41 172.2 230 43.0
Rhsim05G0080000 Rhododendron simsii HOM05D003762 ORTHO05D004374 4.8e-41 172.2 232 41.4
Prupe.5G067300 Prunus persica HOM05D003762 ORTHO05D004374 1.1e-40 171.0 229 43.7
DCAR_030901 Daucus carota HOM05D003762 ORTHO05D004374 1.4e-40 170.6 232 40.5
vmacro11452 Vaccinium macrocarpon HOM05D003762 ORTHO05D004374 1.4e-40 170.6 212 43.9
CSS0030442 Camellia sinensis var. sinensis HOM05D003762 ORTHO05D004374 2.4e-40 169.9 215 45.1
Nitab4.5_0000898g0100 Nicotiana tabacum HOM05D003762 ORTHO05D004374 2.4e-40 169.9 230 43.0
PGSC0003DMG402007612 Solanum tuberosum HOM05D003762 ORTHO05D004374 3.1e-40 169.5 224 44.2
SGA_v2.0_scaffold146G36137 Striga asiatica HOM05D003762 ORTHO05D004374 4.0e-40 169.1 225 42.7
FAN09G0714 Fragaria x ananassa HOM05D003762 ORTHO05D004374 5.3e-40 168.7 237 42.2
Sopen08g024260 Solanum pennellii HOM05D003762 ORTHO05D004374 2.0e-39 166.8 226 43.8
FAN05G3809 Fragaria x ananassa HOM05D003762 ORTHO05D004374 2.6e-39 166.4 237 41.4
FAN14G5252 Fragaria x ananassa HOM05D003762 ORTHO05D004374 2.6e-39 166.4 237 41.4
Actinidia15994 Actinidia chinensis HOM05D003762 ORTHO05D004374 3.4e-39 166.0 212 44.3
SalBow2G2359 Salvia bowleyana HOM05D003762 ORTHO05D004374 3.4e-39 166.0 235 41.7
FAN02G0052 Fragaria x ananassa HOM05D003762 ORTHO05D004374 7.6e-39 164.9 221 42.1
MD15G1431400 Malus domestica HOM05D003762 ORTHO05D004374 7.6e-39 164.9 199 44.7
FvH4_6g29950 Fragaria vesca HOM05D003762 ORTHO05D004374 1.3e-38 164.1 237 40.9
HanXRQChr03g0081311 Helianthus annuus HOM05D003762 ORTHO05D004374 1.7e-38 163.7 230 40.0
MBI14_g44482_MAGBIO Magnolia biondii HOM05D003762 ORTHO05D004374 1.7e-38 163.7 230 38.7
CSS0038493 Camellia sinensis var. sinensis HOM05D003762 ORTHO05D004374 2.2e-38 163.3 229 42.8
Glyma.07G041800 Glycine max HOM05D003762 ORTHO05D004374 2.9e-38 162.9 229 41.0
ECA246G1447 Erigeron canadensis HOM05D000759 ORTHO05D000574 4.9e-38 162.2 232 37.9
Phvul.010G127200 Phaseolus vulgaris HOM05D003762 ORTHO05D004374 4.9e-38 162.2 231 39.4
Aqoxy6G02090 Aquilegia oxysepala HOM05D003762 ORTHO05D004374 1.4e-37 160.6 229 41.5
PGR044G0538 Punica granatum HOM05D003762 ORTHO05D004374 2.4e-37 159.8 234 40.2
Lj8P331T26 Lonicera japonica HOM05D003762 ORTHO05D004374 3.2e-37 159.5 201 42.3
Rhsim11G0183700 Rhododendron simsii HOM05D003762 ORTHO05D004374 4.2e-37 159.1 228 41.2
Hund13161 Selenicereus undatus HOM05D003762 ORTHO05D004374 1.2e-36 157.5 222 42.8
HanXRQChr17g0537091 Helianthus annuus HOM05D003762 ORTHO05D004374 1.6e-36 157.1 188 43.6
Aqoxy6G01949 Aquilegia oxysepala HOM05D003762 ORTHO05D004374 2.1e-36 156.8 232 40.9
Ca_06841_v3 Cicer arietinum L. HOM05D003762 ORTHO05D004374 2.1e-36 156.8 233 37.3
Eucgr.J01004 Eucalyptus grandis HOM05D003762 ORTHO05D004374 2.1e-36 156.8 229 41.0
Glyma.09G089900 Glycine max HOM05D003762 ORTHO05D004374 3.5e-36 156.0 233 39.1
AUR62024643 Chenopodium quinoa HOM05D003762 ORTHO05D004374 1.0e-35 154.5 230 41.3
Eucgr.F01771 Eucalyptus grandis HOM05D003762 ORTHO05D004374 1.3e-35 154.1 232 37.9
arahy.Tifrunner.gnm1.ann1.RFRX47 Arachis hypogaea HOM05D003762 ORTHO05D004374 3.9e-35 152.5 236 39.0
Atru.chr1.3022 Acer truncatum HOM05D003762 ORTHO05D004374 8.7e-35 151.4 153 49.7
arahy.Tifrunner.gnm1.ann1.1PQR27 Arachis hypogaea HOM05D003762 ORTHO05D004374 8.7e-35 151.4 230 38.3
RcHm_v2.0_Chr6g0271261 Rosa chinensis HOM05D003762 ORTHO05D004374 8.7e-35 151.4 237 38.8
Lj1g0002607 Lotus japonicus HOM05D003762 ORTHO05D004374 1.1e-34 151.0 218 39.9
RcHm_v2.0_Chr2g0135951 Rosa chinensis HOM05D003762 ORTHO05D004374 1.5e-34 150.6 237 39.7
Peaxi162Scf00573g00044 Petunia axillaris HOM05D003762 ORTHO05D004374 2.5e-34 149.8 235 38.7
unitig_0.g2831 Utricularia gibba HOM05D003762 ORTHO05D004374 4.3e-34 149.1 216 38.4
Sc24g0003260 Simmondsia chinensis HOM05D003762 ORTHO05D004374 5.6e-34 148.7 232 40.5
RcHm_v2.0_Chr6g0271271 Rosa chinensis HOM05D003762 ORTHO05D004374 9.6e-34 147.9 237 38.4
Lsat_1_v5_gn_3_23460 Lactuca sativa HOM05D003762 ORTHO05D004374 1.3e-33 147.5 228 36.8
arahy.Tifrunner.gnm1.ann1.3GPH34 Arachis hypogaea HOM05D003762 ORTHO05D004374 1.6e-33 147.1 224 37.9
Ah.03g133930 Amaranthus hybridus HOM05D003762 ORTHO05D004374 6.2e-33 145.2 225 39.6
TPR.G19896 Trifolium pratense HOM05D003762 ORTHO05D004374 6.2e-33 145.2 224 37.1
Ciclev10009494m.g Citrus clementina HOM05D003762 ORTHO05D004374 1.1e-32 144.4 234 37.6
Psat4g001640 Pisum sativum HOM05D003762 ORTHO05D004374 1.4e-32 144.1 218 35.8
PGSC0003DMG400003846 Solanum tuberosum HOM05D003762 ORTHO05D004374 4.0e-32 142.5 231 38.1
PSO455G0078 Papaver somniferum HOM05D003762 ORTHO05D004374 1.2e-31 141.0 223 38.1
Haze_16536 Corylus avellana HOM05D003762 ORTHO05D004374 1.5e-31 140.6 205 40.5
Oeu056610.1 Olea europaea HOM05D003762 ORTHO05D004374 2.0e-31 140.2 149 48.3
HPP92_015034 Vanilla planifolia HOM05D003762 ORTHO05D004374 2.0e-31 140.2 206 39.8
TAR625G0731 Trochodendron aralioides HOM05D003762 ORTHO05D004374 3.4e-31 139.4 210 39.0
PSO170G1737 Papaver somniferum HOM05D003762 ORTHO05D004374 1.7e-30 137.1 229 37.1
TAR636G2311 Trochodendron aralioides HOM05D003762 ORTHO05D004374 2.9e-30 136.3 153 44.4
QL03p059502 Quercus lobata HOM05D003762 ORTHO05D004374 4.9e-30 135.6 210 36.2
Solyc08g075580.3 Solanum lycopersicum HOM05D003762 ORTHO05D004374 7.1e-29 131.7 156 46.8
FAN09G1243 Fragaria x ananassa HOM05D003762 ORTHO05D004374 1.6e-28 130.6 222 36.0
TPR.G20064 Trifolium pratense HOM05D003762 ORTHO05D004374 4.6e-28 129.0 224 32.6
HPP92_015113 Vanilla planifolia HOM05D003762 ORTHO05D004374 4.6e-28 129.0 153 43.8
vmacro16904 Vaccinium macrocarpon HOM05D003762 ORTHO05D004374 1.3e-27 127.5 166 42.8
CAN.G1683.1 Capsicum annuum HOM05D003762 ORTHO05D004374 2.3e-27 126.7 203 39.4
CAN.G2872.1 Capsicum annuum HOM05D003762 ORTHO05D004374 2.3e-27 126.7 203 39.4
Zm00001eb276730 Zea mays HOM05D003762 ORTHO05D004374 1.1e-26 124.4 182 37.4
Zm00001eb386260 Zea mays HOM05D003762 ORTHO05D004374 2.5e-26 123.2 182 37.4
MELO3C007348.2 Cucumis melo HOM05D003762 ORTHO05D004374 5.7e-26 122.1 188 37.8
Medtr7g109780 Medicago truncatula HOM05D003762 ORTHO05D004374 5.7e-26 122.1 176 36.9
Mapoly0090s0008 Marchantia polymorpha HOM05D003762 ORTHO05D004374 1.4e-24 117.5 217 35.0
VMungo0331G0552 Vigna mungo HOM05D003762 ORTHO05D004374 3.1e-24 116.3 217 34.1
Medtr0003s0690 Medicago truncatula HOM05D003762 ORTHO05D004374 6.9e-24 115.2 176 34.7
ATR0580G255 Amborella trichopoda HOM05D003762 ORTHO05D004374 9.0e-24 114.8 228 32.0
Rhsim12G0192200 Rhododendron simsii HOM05D003762 ORTHO05D004374 7.6e-23 111.7 145 44.8
AagrBONN_evm.TU.Sc2ySwM_228.1250 Anthoceros agrestis HOM05D003762 ORTHO05D004374 1.3e-22 110.9 218 31.2
MD08G1239800 Malus domestica HOM05D003762 ORTHO05D004374 2.5e-21 106.7 112 46.4
Zm00001eb356740 Zea mays HOM05D003762 ORTHO05D004374 2.5e-21 106.7 182 35.2
Oeu039594.1 Olea europaea HOM05D003762 ORTHO05D004374 4.2e-21 105.9 157 40.1
VMungo0720G1683 Vigna mungo HOM05D003762 ORTHO05D004374 1.6e-20 104.0 141 38.3
Pp3c22_6800 Physcomitrium patens HOM05D003762 ORTHO05D004374 2.7e-20 103.2 220 26.8
QL06p036898 Quercus lobata HOM05D003762 ORTHO05D004374 6.1e-20 102.1 124 43.5
FAN02G2701 Fragaria x ananassa HOM05D003762 ORTHO05D004374 7.9e-20 101.7 201 34.8
PSO455G0143 Papaver somniferum HOM05D003762 ORTHO05D004374 7.9e-20 101.7 222 31.1
MCO15G473 Micromonas commoda HOM05D003762 ORTHO05D004374 3.9e-19 99.4 232 28.4
Lsat_1_v5_gn_3_23440 Lactuca sativa HOM05D003762 ORTHO05D004374 1.5e-18 97.4 181 31.5
Cre07.g314950 Chlamydomonas reinhardtii HOM05D003762 ORTHO05D004374 5.3e-16 89.0 220 27.7
HanXRQChr03g0081131 Helianthus annuus HOM05D003762 ORTHO05D004374 6.9e-16 88.6 78 53.8
Nitab4.5_0009310g0060 Nicotiana tabacum HOM05D003762 ORTHO05D004374 3.4e-15 86.3 118 39.8
Atru.chr1.3024 Acer truncatum HOM05D003762 ORTHO05D004374 1.0e-14 84.7 114 39.5
FAN05G0849 Fragaria x ananassa HOM05D003762 ORTHO05D004374 1.1e-13 81.3 193 31.6
Potri.003G221301 Populus trichocarpa HOM05D003762 ORTHO05D004374 2.7e-12 76.6 134 34.3
AUR62011796 Chenopodium quinoa HOM05D003762 ORTHO05D004374 1.4e-11 74.3 126 37.3
Aqoxy6G01956 Aquilegia oxysepala HOM05D003762 ORTHO05D004374 2.3e-11 73.6 93 44.1
Nn1g05046 Nelumbo nucifera HOM05D002280 ORTHO05D002322 1.1e-10 71.2 91 37.4
Os06g0603400 Oryza sativa ssp. japonica HOM05D003762 ORTHO05D004374 2.0e-10 70.5 57 54.4
QL05p029016 Quercus lobata HOM05D003762 ORTHO05D004374 2.6e-10 70.1 85 44.7
SEGI_04069 Sequoiadendron giganteum HOM05D003762 ORTHO05D004374 5.7e-10 68.9 80 41.2
FAN14G0588 Fragaria x ananassa HOM05D003762 ORTHO05D004374 1.3e-09 67.8 120 35.0
FvH4_6g41460 Fragaria vesca HOM05D003762 ORTHO05D004374 2.2e-09 67.0 118 34.7
Atru.chr1.3033 Acer truncatum HOM05D003762 ORTHO05D004374 4.5e-07 59.3 80 40.0


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