Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g22860 Brassica carinata HOM05D003999 ORTHO05D005219 2.6e-287 991.5 550 100.0
BolC9t54356H Brassica oleracea HOM05D003999 ORTHO05D005219 7.6e-279 963.4 550 97.5
C09p14530 Brassica napus HOM05D003999 ORTHO05D005219 1.6e-236 822.8 550 83.6
BcaB07g31614 Brassica carinata HOM05D003999 ORTHO05D005219 2.0e-210 736.1 592 73.8
Sp3g32620 Schrenkiella parvula HOM05D003999 ORTHO05D005219 8.0e-196 687.6 640 63.9
AL3G49030 Arabidopsis lyrata HOM05D003999 ORTHO05D005219 1.1e-184 650.6 626 61.7
AT2G19260 Arabidopsis thaliana HOM05D003999 ORTHO05D005219 2.8e-180 636.0 627 61.1
Carub.0003s3349 Capsella rubella HOM05D003999 ORTHO05D005219 1.4e-179 633.6 614 62.5
BcaB03g16715 Brassica carinata HOM05D003999 ORTHO05D005219 8.9e-179 630.9 636 58.8
Thhalv10022602m.g Eutrema salsugineum HOM05D003999 ORTHO05D005219 8.6e-174 614.4 618 60.4
A07p01530 Brassica napus HOM05D003999 ORTHO05D005219 1.7e-169 600.1 623 61.6
BraA07t27954Z Brassica rapa HOM05D003999 ORTHO05D005219 1.7e-169 600.1 623 61.6
BcaC06g36543 Brassica carinata HOM05D003999 ORTHO05D005219 7.8e-167 591.3 626 61.3
BolC7t40703H Brassica oleracea HOM05D003999 ORTHO05D005219 4.3e-165 585.5 626 61.2
C07p03110 Brassica napus HOM05D003999 ORTHO05D005219 5.6e-165 585.1 626 61.2
CARHR109720 Cardamine hirsuta HOM05D003999 ORTHO05D005219 7.8e-151 538.1 546 59.5
BraA09t36876Z Brassica rapa HOM05D003999 ORTHO05D005219 1.7e-145 520.4 391 82.6
Aa31LG8G16300 Aethionema arabicum HOM05D003999 ORTHO05D005219 3.3e-109 399.8 663 44.5
A09p12310 Brassica napus HOM05D003999 ORTHO05D005219 5.7e-101 372.5 256 83.6
THA.LOC104814650 Tarenaya hassleriana HOM05D003999 ORTHO05D005219 1.9e-72 277.7 277 52.7
Duzib114G0910 Durio zibethinus HOM05D003999 ORTHO05D005219 3.1e-62 243.8 254 51.2
Thecc.10G174600 Theobroma cacao HOM05D003999 ORTHO05D005219 3.1e-62 243.8 254 53.5
Gohir.D10G188000 Gossypium hirsutum HOM05D003999 ORTHO05D005219 3.4e-61 240.4 241 50.6
Duzib106G1697 Durio zibethinus HOM05D003999 ORTHO05D005219 1.4e-59 235.0 256 50.8
Gohir.D06G185700 Gossypium hirsutum HOM05D003999 ORTHO05D005219 2.4e-59 234.2 264 48.1
Gorai.010G217300 Gossypium raimondii HOM05D003999 ORTHO05D005219 2.4e-59 234.2 264 48.1
Prupe.1G075400 Prunus persica HOM05D003999 ORTHO05D005219 3.2e-59 233.8 238 51.7
RcHm_v2.0_Chr7g0219501 Rosa chinensis HOM05D003999 ORTHO05D005219 4.1e-59 233.4 241 51.9
Gohir.A06G176100 Gossypium hirsutum HOM05D003999 ORTHO05D005219 5.4e-59 233.0 269 47.2
Gorai.011G210800 Gossypium raimondii HOM05D003999 ORTHO05D005219 3.5e-58 230.3 226 51.3
Potri.018G142300 Populus trichocarpa HOM05D003999 ORTHO05D005219 1.3e-57 228.4 245 49.4
Atru.chr7.755 Acer truncatum HOM05D003999 ORTHO05D005219 3.0e-57 227.3 271 46.9
Atru.chr7.776 Acer truncatum HOM05D003999 ORTHO05D005219 3.0e-57 227.3 271 46.9
Gohir.A10G181100 Gossypium hirsutum HOM05D003999 ORTHO05D005219 8.6e-57 225.7 250 49.2
Dinv41175 Davidia involucrata HOM05D003999 ORTHO05D005219 1.1e-56 225.3 244 49.2
Sed0001699 Sechium edule HOM05D003999 ORTHO05D005219 1.1e-56 225.3 235 49.4
Potri.006G075400 Populus trichocarpa HOM05D003999 ORTHO05D005219 1.5e-56 224.9 288 44.1
Rhsim03G0266100 Rhododendron simsii HOM05D003999 ORTHO05D005219 1.5e-56 224.9 235 47.7
MD13G1241700 Malus domestica HOM05D003999 ORTHO05D005219 3.3e-56 223.8 228 53.1
MD16G1248600 Malus domestica HOM05D003999 ORTHO05D005219 7.3e-56 222.6 208 55.3
Sabra18G0116200 Salix brachista HOM05D003999 ORTHO05D005219 7.3e-56 222.6 261 47.1
Cfa013453 Carpinus fangiana HOM05D003999 ORTHO05D005219 1.6e-55 221.5 257 49.4
Manes.06G019800 Manihot esculenta HOM05D003999 ORTHO05D005219 2.8e-55 220.7 242 48.8
Hund06701 Selenicereus undatus HOM05D003999 ORTHO05D005219 3.6e-55 220.3 245 49.0
vmacro05997 Vaccinium macrocarpon HOM05D003999 ORTHO05D005219 4.7e-55 219.9 241 46.9
COL.COLO4_08503 Corchorus olitorius HOM05D003999 ORTHO05D005219 1.1e-54 218.8 313 45.0
FAN04G0885 Fragaria x ananassa HOM05D003999 ORTHO05D005219 1.1e-54 218.8 230 48.7
Actinidia38494 Actinidia chinensis HOM05D003999 ORTHO05D005219 5.2e-54 216.5 314 40.1
Sed0015737 Sechium edule HOM05D003999 ORTHO05D005219 1.2e-53 215.3 236 46.6
TWI34G1954 Tripterygium wilfordii HOM05D003999 ORTHO05D005219 1.2e-53 215.3 249 47.0
Medtr3g100350 Medicago truncatula HOM05D003999 ORTHO05D005219 2.0e-53 214.5 231 49.8
TWI63G1413 Tripterygium wilfordii HOM05D003999 ORTHO05D005219 2.6e-53 214.2 242 47.5
Ciclev10010423m.g Citrus clementina HOM05D003999 ORTHO05D005219 3.4e-53 213.8 243 47.7
Eucgr.C02221 Eucalyptus grandis HOM05D003999 ORTHO05D005219 7.5e-53 212.6 226 50.4
VMungo1309G0585 Vigna mungo HOM05D003999 ORTHO05D005219 7.5e-53 212.6 226 47.3
CiPaw.07G197100 Carya illinoinensis HOM05D003999 ORTHO05D005219 9.9e-53 212.2 294 44.2
Sc08g0004740 Simmondsia chinensis HOM05D003999 ORTHO05D005219 9.9e-53 212.2 243 48.1
Actinidia29951 Actinidia chinensis HOM05D003999 ORTHO05D005219 1.7e-52 211.5 241 46.5
DCAR_014666 Daucus carota HOM05D003999 ORTHO05D005219 1.7e-52 211.5 229 47.2
FAN13G0316 Fragaria x ananassa HOM05D003999 ORTHO05D005219 2.2e-52 211.1 237 47.3
Lj1g0014223 Lotus japonicus HOM05D003999 ORTHO05D005219 2.2e-52 211.1 231 48.1
Glyma.04G001900 Glycine max HOM05D003999 ORTHO05D005219 2.9e-52 210.7 280 43.6
Glyma.06G001400 Glycine max HOM05D003999 ORTHO05D005219 2.9e-52 210.7 231 47.6
FAN18G4269 Fragaria x ananassa HOM05D003999 ORTHO05D005219 3.7e-52 210.3 244 46.7
Nn8g40781 Nelumbo nucifera HOM05D003999 ORTHO05D005219 4.9e-52 209.9 246 43.9
Sabra06G0056300 Salix brachista HOM05D003999 ORTHO05D005219 4.9e-52 209.9 265 44.2
TPR.G6349 Trifolium pratense HOM05D003999 ORTHO05D005219 6.4e-52 209.5 231 49.4
MSTRG.26544 Avicennia marina HOM05D003999 ORTHO05D005219 1.4e-51 208.4 237 45.6
PSO170G0656 Papaver somniferum HOM05D003999 ORTHO05D005219 1.9e-51 208.0 234 45.3
Psat5g048320 Pisum sativum HOM05D003999 ORTHO05D005219 4.1e-51 206.8 231 47.2
Aqoxy7G02806 Aquilegia oxysepala HOM05D003999 ORTHO05D005219 7.1e-51 206.1 233 45.9
Ca_15280_v3 Cicer arietinum L. HOM05D003999 ORTHO05D005219 9.2e-51 205.7 231 48.5
Peaxi162Scf00670g00347 Petunia axillaris HOM05D003999 ORTHO05D005219 1.6e-50 204.9 237 46.4
ECA240G0372 Erigeron canadensis HOM05D003999 ORTHO05D005219 6.0e-50 203.0 220 47.3
Migut.L01882 Erythranthe guttata HOM05D003999 ORTHO05D005219 7.8e-50 202.6 224 44.2
HanXRQChr09g0244721 Helianthus annuus HOM05D003999 ORTHO05D005219 7.8e-50 202.6 222 47.7
Phvul.009G117100 Phaseolus vulgaris HOM05D003999 ORTHO05D005219 7.8e-50 202.6 226 45.6
Hma1.2p1_1326F.1_g275830 Hydrangea macrophylla HOM05D003999 ORTHO05D005219 1.3e-49 201.8 254 44.1
EL10Ac8g19270 Beta vulgaris HOM05D003999 ORTHO05D005219 5.1e-49 199.9 241 46.1
arahy.Tifrunner.gnm1.ann1.K74ZDU Arachis hypogaea HOM05D003999 ORTHO05D005219 8.6e-49 199.1 233 46.8
AUR62027455 Chenopodium quinoa HOM05D003999 ORTHO05D005219 8.6e-49 199.1 286 41.6
Cc06_g20850 Coffea canephora HOM05D003999 ORTHO05D005219 1.1e-48 198.7 282 41.5
MBI13_g34042_MAGBIO Magnolia biondii HOM05D003999 ORTHO05D005219 1.5e-48 198.4 227 44.9
CAN.G79.26 Capsicum annuum HOM05D003999 ORTHO05D005219 1.9e-48 198.0 234 44.0
CDE06G2299 Ceratophyllum demersum HOM05D003999 ORTHO05D005219 2.5e-48 197.6 211 47.9
Lalb_Chr11g0061221 Lupinus albus HOM05D003999 ORTHO05D005219 2.5e-48 197.6 225 46.2
MELO3C017428.2 Cucumis melo HOM05D003999 ORTHO05D005219 3.3e-48 197.2 210 47.6
MBI16_g05835_MAGBIO Magnolia biondii HOM05D003999 ORTHO05D005219 4.3e-48 196.8 233 43.8
Sopen02g019140 Solanum pennellii HOM05D003999 ORTHO05D005219 5.6e-48 196.4 225 44.4
FAN08G2100 Fragaria x ananassa HOM05D003999 ORTHO05D005219 9.5e-48 195.7 210 49.0
unitig_8.g4939 Utricularia gibba HOM05D003999 ORTHO05D005219 9.5e-48 195.7 262 39.7
FvH4_5g27730 Fragaria vesca HOM05D003999 ORTHO05D005219 1.2e-47 195.3 210 49.0
Migut.J00798 Erythranthe guttata HOM05D003999 ORTHO05D005219 3.6e-47 193.7 224 48.2
AUR62031249 Chenopodium quinoa HOM05D003999 ORTHO05D005219 2.4e-46 191.0 286 40.2
CDE02G3353 Ceratophyllum demersum HOM05D003999 ORTHO05D005219 4.0e-46 190.3 212 47.2
Zm00001eb002000 Zea mays HOM05D003999 ORTHO05D005219 5.2e-46 189.9 227 41.9
CsaV3_1G031880 Cucumis sativus L. HOM05D003999 ORTHO05D005219 6.8e-46 189.5 247 40.9
Ciclev10008331m.g Citrus clementina HOM05D003999 ORTHO05D005219 8.9e-46 189.1 255 40.0
Lsat_1_v5_gn_7_51121 Lactuca sativa HOM05D003999 ORTHO05D005219 1.2e-45 188.7 229 44.5
Os04g0425100 Oryza sativa ssp. japonica HOM05D003999 ORTHO05D005219 1.5e-45 188.3 222 44.1
SGA_v2.0_scaffold231G43410 Striga asiatica HOM05D003999 ORTHO05D005219 1.5e-45 188.3 226 43.4
ATR0626G364 Amborella trichopoda HOM05D003999 ORTHO05D005219 5.8e-45 186.4 228 42.1
Thecc.09G004800 Theobroma cacao HOM05D003999 ORTHO05D005219 1.7e-44 184.9 251 42.2
TAR625G1146 Trochodendron aralioides HOM05D003999 ORTHO05D005219 1.7e-44 184.9 216 43.5
Haze_18974 Corylus avellana HOM05D003999 ORTHO05D005219 2.2e-44 184.5 240 39.6
Potri.006G277400 Populus trichocarpa HOM05D003999 ORTHO05D005219 2.9e-44 184.1 239 41.0
DCAR_020148 Daucus carota HOM05D003999 ORTHO05D005219 4.9e-44 183.3 238 42.0
GSVIVG01010859001 Vitis vinifera HOM05D003999 ORTHO05D005219 1.9e-43 181.4 143 61.5
unitig_578.g16064 Utricularia gibba HOM05D003999 ORTHO05D005219 4.2e-43 180.3 244 38.1
arahy.Tifrunner.gnm1.ann1.M9AABA Arachis hypogaea HOM05D003999 ORTHO05D005219 9.2e-43 179.1 242 41.7
ATR0681G357 Amborella trichopoda HOM05D003999 ORTHO05D005219 1.6e-42 178.3 227 41.9
Zm00001eb274650 Zea mays HOM05D003999 ORTHO05D005219 7.8e-42 176.0 249 39.0
Haze_18980 Corylus avellana HOM05D003999 ORTHO05D005219 1.1e-40 172.2 260 36.9
TAR383G0399 Trochodendron aralioides HOM05D003999 ORTHO05D005219 1.5e-40 171.8 224 39.7
TAR626G1281 Trochodendron aralioides HOM05D003999 ORTHO05D005219 1.9e-40 171.4 231 41.6
CiPaw.08G032500 Carya illinoinensis HOM05D003999 ORTHO05D005219 9.6e-40 169.1 234 44.9
CiPaw.15G150400 Carya illinoinensis HOM05D003999 ORTHO05D005219 2.8e-39 167.5 190 47.4
SalBow5G4070 Salvia bowleyana HOM05D003999 ORTHO05D005219 8.1e-39 166.0 166 51.2
Solyc02g069980.4 Solanum lycopersicum HOM05D003999 ORTHO05D005219 1.1e-38 165.6 197 42.1
DCAR_018034 Daucus carota HOM05D003999 ORTHO05D005219 1.4e-38 165.2 216 41.7
Nitab4.5_0001225g0140 Nicotiana tabacum HOM05D003999 ORTHO05D005219 3.1e-38 164.1 207 43.0
Nitab4.5_0001583g0100 Nicotiana tabacum HOM05D003999 ORTHO05D005219 2.0e-37 161.4 207 42.5
Atru.chr7.2670 Acer truncatum HOM05D003999 ORTHO05D005219 7.6e-37 159.5 203 42.9
Cfa020676 Carpinus fangiana HOM05D003999 ORTHO05D005219 9.9e-37 159.1 236 39.4
ECA234G1030 Erigeron canadensis HOM05D003999 ORTHO05D005219 6.0e-34 149.8 139 51.8
Sabra06G0215100 Salix brachista HOM05D003999 ORTHO05D005219 1.0e-33 149.1 286 32.9
A09p12320 Brassica napus HOM05D003999 ORTHO05D005219 2.5e-32 144.4 101 78.2
SMO117G0282 Selaginella moellendorffii HOM05D003999 ORTHO05D005219 8.1e-31 139.4 247 36.4
Haze_22020 Corylus avellana HOM05D003999 ORTHO05D005219 3.1e-30 137.5 189 44.4
Carub.0003s3352 Capsella rubella HOM05D003999 ORTHO05D005219 9.0e-30 136.0 76 78.9
Mapoly0046s0104 Marchantia polymorpha HOM05D003999 ORTHO05D005219 1.3e-28 132.1 253 35.6
CSS0024594 Camellia sinensis var. sinensis HOM05D003999 ORTHO05D005219 2.2e-28 131.3 188 40.4
MSTRG.10442 Avicennia marina HOM05D003999 ORTHO05D005219 2.7e-26 124.4 116 50.9
CSS0017119 Camellia sinensis var. sinensis HOM05D003999 ORTHO05D005219 3.5e-26 124.0 189 40.7
ClCG06G013610 Citrullus lanatus HOM05D003999 ORTHO05D005219 3.5e-26 124.0 83 66.3
SEGI_05476 Sequoiadendron giganteum HOM05D003999 ORTHO05D005219 3.5e-26 124.0 250 32.0
Cc00_g03720 Coffea canephora HOM05D003999 ORTHO05D005219 1.2e-21 109.0 225 33.8
GSVIVG01035550001 Vitis vinifera HOM05D003999 ORTHO05D005219 9.3e-19 99.4 74 58.1
SEGI_29375 Sequoiadendron giganteum HOM05D003999 ORTHO05D005219 7.9e-18 96.3 200 32.5
Phvul.007G142700 Phaseolus vulgaris HOM05D003999 ORTHO05D005219 1.0e-17 95.9 139 39.6
Actinidia27131 Actinidia chinensis HOM05D003999 ORTHO05D005219 3.9e-17 94.0 126 39.7
Cfa020674 Carpinus fangiana HOM05D003999 ORTHO05D005219 1.1e-14 85.9 63 61.9
PGSC0003DMG400021118 Solanum tuberosum HOM05D003999 ORTHO05D005219 4.0e-14 84.0 201 27.9
Oeu064556.1 Olea europaea HOM05D003999 ORTHO05D005219 9.0e-14 82.8 116 35.3
HPP92_010790 Vanilla planifolia HOM05D003999 ORTHO05D005219 3.4e-13 80.9 132 34.8
RcHm_v2.0_Chr7g0177591 Rosa chinensis HOM05D003999 ORTHO05D005219 8.4e-12 76.3 110 37.3
MBI16_g10833_MAGBIO Magnolia biondii HOM05D003999 ORTHO05D005219 4.2e-11 73.9 113 38.1
MD06G1235600 Malus domestica HOM05D003999 ORTHO05D005219 4.2e-11 73.9 108 36.1
Manes.03G002401 Manihot esculenta HOM05D003999 ORTHO05D005219 2.7e-10 71.2 117 38.5
Prupe.5G240400 Prunus persica HOM05D003999 ORTHO05D005219 4.6e-10 70.5 110 36.4
FvH4_5g18011 Fragaria vesca HOM05D003999 ORTHO05D005219 1.0e-09 69.3 118 33.9
FAN13G0118 Fragaria x ananassa HOM05D003999 ORTHO05D005219 1.0e-09 69.3 117 35.9
FAN18G0538 Fragaria x ananassa HOM05D003999 ORTHO05D005219 1.0e-09 69.3 118 33.9
PGR044G2313 Punica granatum HOM05D003999 ORTHO05D005219 3.7e-07 60.8 84 34.5
SEGI_17596 Sequoiadendron giganteum HOM05D003999 ORTHO05D005219 1.4e-06 58.9 133 24.8


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