Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g21004 Brassica carinata HOM05D001678 ORTHO05D001698 7.3e-43 176.8 87 100.0
BolC9t56511H Brassica oleracea HOM05D001678 ORTHO05D001698 2.0e-37 158.7 80 96.2
BcaC04g21001 Brassica carinata HOM05D001678 ORTHO05D001698 4.6e-37 157.5 76 100.0
A08p16470 Brassica napus HOM05D001678 ORTHO05D001698 6.0e-37 157.1 82 92.7
BraA04t16704Z Brassica rapa HOM05D001678 ORTHO05D001698 3.0e-36 154.8 80 93.8
BraA05t21006Z Brassica rapa HOM05D001678 ORTHO05D001698 3.0e-36 154.8 80 93.8
C09p36790 Brassica napus HOM05D001678 ORTHO05D001698 3.6e-34 147.9 72 100.0
A09p15840 Brassica napus HOM05D001678 ORTHO05D001698 5.2e-33 144.1 72 97.2
BcaC06g35122 Brassica carinata HOM05D001678 ORTHO05D001698 6.8e-33 143.7 72 95.8
BolC3t21566H Brassica oleracea HOM05D001678 ORTHO05D001698 8.9e-33 143.3 80 90.0
BcaB02g11255 Brassica carinata HOM05D001678 ORTHO05D001698 2.1e-21 105.5 81 72.8
Sp7g09060 Schrenkiella parvula HOM05D001678 ORTHO05D001698 5.6e-19 97.4 75 65.3
AL1G56710 Arabidopsis lyrata HOM05D001678 ORTHO05D001698 3.4e-16 88.2 94 53.2
Thhalv10029209m.g Eutrema salsugineum HOM05D001678 ORTHO05D001698 4.2e-14 81.3 65 64.6
BcaNung00414 Brassica carinata HOM05D001678 ORTHO05D001698 1.2e-13 79.7 66 60.6
Thhalv10024061m.g Eutrema salsugineum HOM05D001678 ORTHO05D001698 1.2e-13 79.7 65 63.1
BcaB05g23433 Brassica carinata HOM05D001678 ORTHO05D001698 2.7e-13 78.6 66 59.1
A09p37990 Brassica napus HOM05D001678 ORTHO05D001698 4.6e-13 77.8 69 58.0
BraA09t39310Z Brassica rapa HOM05D001678 ORTHO05D001698 4.6e-13 77.8 69 58.0
C07p02270 Brassica napus HOM05D001678 ORTHO05D001698 7.8e-13 77.0 69 58.0
BolC7t40637H Brassica oleracea HOM05D001678 ORTHO05D001698 7.8e-13 77.0 69 58.0
BcaC06g36603 Brassica carinata HOM05D001678 ORTHO05D001698 1.7e-12 75.9 65 58.5
A05p21020 Brassica napus HOM05D001678 ORTHO05D001698 3.9e-12 74.7 37 94.6
C05p38790 Brassica napus HOM05D001678 ORTHO05D001698 6.6e-12 73.9 69 55.1
BolC5t32619H Brassica oleracea HOM05D001678 ORTHO05D001698 6.6e-12 73.9 69 55.1
Thhalv10027019m.g Eutrema salsugineum HOM05D001678 ORTHO05D001698 8.7e-12 73.6 59 64.4
C07p02260 Brassica napus HOM05D001678 ORTHO05D001698 1.1e-11 73.2 69 55.1
BolC7t40636H Brassica oleracea HOM05D001678 ORTHO05D001698 1.1e-11 73.2 69 55.1
C05p18830 Brassica napus HOM05D001678 ORTHO05D001698 1.9e-11 72.4 69 53.6
C06p18860 Brassica napus HOM05D001678 ORTHO05D001698 1.9e-11 72.4 65 53.8
BolC6t37091H Brassica oleracea HOM05D001678 ORTHO05D001698 1.9e-11 72.4 65 53.8
Carub.0011s0001 Capsella rubella HOM05D001678 ORTHO05D001698 2.5e-11 72.0 80 48.8
BcaC05g25931 Brassica carinata HOM05D001678 ORTHO05D001698 3.3e-11 71.6 69 52.2
A06p22390 Brassica napus HOM05D001678 ORTHO05D001698 5.3e-09 64.3 35 85.7
Sp6g02750 Schrenkiella parvula HOM05D001678 ORTHO05D001698 1.9e-06 55.8 66 45.5
Atru.chr7.11 Acer truncatum HOM05D000034 ORTHO05D000037 3.2e-06 55.1 83 41.0
BcaC03g14168 Brassica carinata HOM05D001678 ORTHO05D001698 5.4e-06 54.3 78 38.5
C02p14410 Brassica napus HOM05D001678 ORTHO05D001698 5.4e-06 54.3 66 42.4
C02p49350 Brassica napus HOM05D001678 ORTHO05D001698 5.4e-06 54.3 66 42.4
BolC2t07565H Brassica oleracea HOM05D001678 ORTHO05D001698 5.4e-06 54.3 66 42.4
BolC2t11022H Brassica oleracea HOM05D001678 ORTHO05D001698 5.4e-06 54.3 66 42.4
A09p28080 Brassica napus HOM05D001678 ORTHO05D001698 7.1e-06 53.9 66 42.4
BolC5t31786H Brassica oleracea HOM05D001678 ORTHO05D001698 9.3e-06 53.5 54 50.0


User provided reference genes

Program Settings