Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g19884 Brassica carinata HOM05D001038 ORTHO05D000395 5.1e-51 204.1 104 100.0
C09p50150 Brassica napus HOM05D001038 ORTHO05D000395 1.1e-48 196.4 104 96.2
BcaB08g35415 Brassica carinata HOM05D001038 ORTHO05D000395 2.5e-29 132.1 88 72.7
BcaB07g30174 Brassica carinata HOM05D001038 ORTHO05D000395 6.0e-28 127.5 86 73.3
BcaC08g47005 Brassica carinata HOM05D001038 ORTHO05D000395 3.9e-27 124.8 88 69.3
BraA04t16796Z Brassica rapa HOM05D001038 ORTHO05D000395 5.7e-26 120.9 88 65.9
BcaC05g27733 Brassica carinata HOM05D001038 ORTHO05D000395 1.6e-25 119.4 88 69.3
BcaB01g00119 Brassica carinata HOM05D001038 ORTHO05D000395 2.1e-25 119.0 79 74.7
BcaC03g15415 Brassica carinata HOM05D001038 ORTHO05D000395 6.2e-25 117.5 88 65.9
BcaB08g34565 Brassica carinata HOM05D001038 ORTHO05D000395 2.4e-24 115.5 75 74.7
BcaC01g03478 Brassica carinata HOM05D001038 ORTHO05D000395 2.4e-24 115.5 88 65.9
C03p52030 Brassica napus HOM05D001038 ORTHO05D000395 2.4e-24 115.5 88 65.9
BolC3t17485H Brassica oleracea HOM05D001038 ORTHO05D000395 2.4e-24 115.5 88 65.9
BcaB01g01915 Brassica carinata HOM05D001038 ORTHO05D000395 6.9e-24 114.0 90 64.4
BcaB03g12379 Brassica carinata HOM05D001038 ORTHO05D000395 6.9e-24 114.0 88 63.6
BcaB04g19295 Brassica carinata HOM05D001038 ORTHO05D000395 2.0e-23 112.5 73 74.0
C03p74230 Brassica napus HOM05D001038 ORTHO05D000395 2.0e-23 112.5 86 65.1
BcaC04g20742 Brassica carinata HOM05D001038 ORTHO05D010763 2.6e-23 112.1 86 66.3
BcaC04g23074 Brassica carinata HOM05D001038 ORTHO05D019962 2.6e-23 112.1 104 59.6
C09p39690 Brassica napus HOM05D001038 ORTHO05D000395 2.6e-23 112.1 86 66.3
BolC9t56849H Brassica oleracea HOM05D001038 ORTHO05D000395 2.6e-23 112.1 86 66.3
BcaC09g50083 Brassica carinata HOM05D001038 ORTHO05D000395 3.4e-23 111.7 88 63.6
BraA06t25413Z Brassica rapa HOM05D001038 ORTHO05D000395 3.4e-23 111.7 71 77.5
C02p45440 Brassica napus HOM05D001038 ORTHO05D000395 5.8e-23 110.9 69 79.7
BolC3t19681H Brassica oleracea HOM05D001038 ORTHO05D000395 5.8e-23 110.9 86 64.0
BraA05t20013Z Brassica rapa HOM05D001038 ORTHO05D000395 5.8e-23 110.9 86 64.0
BcaB02g10939 Brassica carinata HOM05D001038 ORTHO05D000395 2.2e-22 109.0 87 62.1
BcaB04g18537 Brassica carinata HOM05D001038 ORTHO05D000395 2.9e-22 108.6 69 72.5
BcaB05g23513 Brassica carinata HOM05D001038 ORTHO05D000395 2.9e-22 108.6 72 72.2
BcaC01g02304 Brassica carinata HOM05D001038 ORTHO05D000395 3.8e-22 108.2 68 80.9
C03p66800 Brassica napus HOM05D001038 ORTHO05D000395 3.8e-22 108.2 68 80.9
BcaB01g00832 Brassica carinata HOM05D001038 ORTHO05D000395 5.0e-22 107.8 88 58.0
BcaB01g01124 Brassica carinata HOM05D001038 ORTHO05D000395 1.9e-21 105.9 81 64.2
BraSC36t46105Z Brassica rapa HOM05D001038 ORTHO05D000395 2.5e-21 105.5 82 64.6
BcaC08g46980 Brassica carinata HOM05D001038 ORTHO05D000395 3.2e-21 105.1 69 75.4
A04p11380 Brassica napus HOM05D001038 ORTHO05D000395 4.2e-21 104.8 82 62.2
BraA04t16800Z Brassica rapa HOM05D001038 ORTHO05D000395 4.2e-21 104.8 82 62.2
BcaB07g31487 Brassica carinata HOM05D001038 ORTHO05D000395 5.5e-21 104.4 76 68.4
C05p37210 Brassica napus HOM05D001038 ORTHO05D000395 5.5e-21 104.4 66 78.8
BcaNung00468 Brassica carinata HOM05D001038 ORTHO05D000395 7.2e-21 104.0 69 72.5
A02p27290 Brassica napus HOM05D001038 ORTHO05D000395 2.7e-20 102.1 86 57.0
BolC4t26208H Brassica oleracea HOM05D001038 ORTHO05D000395 2.7e-20 102.1 80 62.5
BraA02t07755Z Brassica rapa HOM05D001038 ORTHO05D000395 2.7e-20 102.1 86 57.0
BcaB06g26021 Brassica carinata HOM05D001038 ORTHO05D000395 3.5e-20 101.7 88 56.8
BcaB06g26720 Brassica carinata HOM05D001038 ORTHO05D000395 6.1e-20 100.9 88 59.1
BcaB06g27965 Brassica carinata HOM05D001038 ORTHO05D000395 6.1e-20 100.9 88 59.1
BcaC05g25823 Brassica carinata HOM05D001038 ORTHO05D014932 6.1e-20 100.9 80 65.0
BNapus_Darmor_BZH_scaffold_104p00080 Brassica napus HOM05D001038 ORTHO05D000395 7.9e-20 100.5 82 62.2
BcaB02g07256 Brassica carinata HOM05D001038 ORTHO05D024222 1.3e-19 99.8 73 64.4
BcaB08g36368 Brassica carinata HOM05D001038 ORTHO05D000395 1.8e-19 99.4 88 55.7
BolC6t36138H Brassica oleracea HOM05D001038 ORTHO05D014932 1.8e-19 99.4 80 63.8
BolC7t43636H Brassica oleracea HOM05D001038 ORTHO05D000395 1.8e-19 99.4 69 71.0
BcaC09g49024 Brassica carinata HOM05D001038 ORTHO05D000395 3.0e-19 98.6 59 83.1
A01p24490 Brassica napus HOM05D001038 ORTHO05D021947 6.7e-19 97.4 69 65.2
BcaC06g34271 Brassica carinata HOM05D001038 ORTHO05D000395 8.7e-19 97.1 69 69.6
BcaC03g17929 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-18 96.7 69 66.7
C07p15560 Brassica napus HOM05D001038 ORTHO05D000395 1.1e-18 96.7 69 66.7
BcaC08g43120 Brassica carinata HOM05D001038 ORTHO05D032078 2.5e-18 95.5 69 65.2
BolC7t41688H Brassica oleracea HOM05D001038 ORTHO05D000395 3.3e-18 95.1 71 60.6
BcaC07g37762 Brassica carinata HOM05D001038 ORTHO05D000395 7.4e-18 94.0 69 65.2
BolC7t42043H Brassica oleracea HOM05D001038 ORTHO05D000395 7.4e-18 94.0 69 65.2
BolC8t48147H Brassica oleracea HOM05D001038 ORTHO05D000395 7.4e-18 94.0 69 65.2
BraA07t28816Z Brassica rapa HOM05D001038 ORTHO05D000395 7.4e-18 94.0 68 64.7
BcaB04g17766 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-17 93.2 73 60.3
A03p30780 Brassica napus HOM05D001038 ORTHO05D000395 1.6e-17 92.8 61 73.8
BraA05t20300Z Brassica rapa HOM05D001038 ORTHO05D000395 2.2e-17 92.4 65 67.7
BraA03t12256Z Brassica rapa HOM05D001038 ORTHO05D000395 4.8e-17 91.3 61 72.1
C06p03930 Brassica napus HOM05D001038 ORTHO05D000395 6.3e-17 90.9 65 67.7
BcaB02g10843 Brassica carinata HOM05D001038 ORTHO05D000395 2.4e-16 89.0 90 50.0
BraA06t25409Z Brassica rapa HOM05D001038 ORTHO05D000395 2.4e-16 89.0 63 63.5
C01p43390 Brassica napus HOM05D001038 ORTHO05D024222 4.1e-16 88.2 52 84.6
BraA09t36747Z Brassica rapa HOM05D001038 ORTHO05D000395 2.0e-15 85.9 88 52.3
C07p13440 Brassica napus HOM05D001038 ORTHO05D016703 3.4e-15 85.1 75 53.3
BolC7t41839H Brassica oleracea HOM05D001038 ORTHO05D016703 3.4e-15 85.1 75 53.3
C07p12210 Brassica napus HOM05D001038 ORTHO05D040877 5.9e-15 84.3 86 50.0
C07p18280 Brassica napus HOM05D001038 ORTHO05D000395 7.7e-15 84.0 63 58.7
BolC7t42338H Brassica oleracea HOM05D001038 ORTHO05D000395 1.0e-14 83.6 63 58.7
A06p16020 Brassica napus HOM05D001038 ORTHO05D024222 1.3e-14 83.2 61 68.9
A06p36110 Brassica napus HOM05D001038 ORTHO05D024222 1.3e-14 83.2 61 68.9
BolC2t11144H Brassica oleracea HOM05D001038 ORTHO05D040877 1.7e-14 82.8 86 48.8
BolC7t41409H Brassica oleracea HOM05D001038 ORTHO05D000395 1.7e-14 82.8 63 60.3
BraA08t34502Z Brassica rapa HOM05D001038 ORTHO05D000395 1.7e-14 82.8 80 53.8
BcaC08g46850 Brassica carinata HOM05D001038 ORTHO05D000395 2.9e-14 82.0 69 58.0
BraA08t34217Z Brassica rapa HOM05D001038 ORTHO05D016716 3.8e-14 81.6 71 54.9
BcaC04g19622 Brassica carinata HOM05D001038 ORTHO05D000395 5.0e-14 81.3 88 51.1
BolC5t33633H Brassica oleracea HOM05D001038 ORTHO05D016716 5.0e-14 81.3 71 53.5
BraA03t13820Z Brassica rapa HOM05D001038 ORTHO05D000395 5.0e-14 81.3 65 58.5
A01p23200 Brassica napus HOM05D001038 ORTHO05D000395 6.5e-14 80.9 84 47.6
C08p22730 Brassica napus HOM05D001038 ORTHO05D016776 6.5e-14 80.9 73 53.4
BraA04t18197Z Brassica rapa HOM05D001038 ORTHO05D000395 6.5e-14 80.9 69 55.1
BraA05t19810Z Brassica rapa HOM05D001038 ORTHO05D016703 6.5e-14 80.9 76 51.3
A06p26760 Brassica napus HOM05D001038 ORTHO05D000395 8.5e-14 80.5 75 49.3
BcaB01g01350 Brassica carinata HOM05D001038 ORTHO05D000395 1.4e-13 79.7 68 54.4
BraSC37t46126Z Brassica rapa HOM05D001038 ORTHO05D016776 1.9e-13 79.3 73 52.1
BcaB07g32736 Brassica carinata HOM05D001038 ORTHO05D024484 3.2e-13 78.6 69 55.1
C09p60390 Brassica napus HOM05D001038 ORTHO05D016703 3.2e-13 78.6 68 50.0
BcaB03g16578 Brassica carinata HOM05D001038 ORTHO05D000395 4.2e-13 78.2 88 50.0
C05p36690 Brassica napus HOM05D001038 ORTHO05D000395 5.5e-13 77.8 81 45.7
BolC4t27362H Brassica oleracea HOM05D001038 ORTHO05D000395 5.5e-13 77.8 69 52.2
BolC7t40990H Brassica oleracea HOM05D001957 ORTHO05D002015 5.5e-13 77.8 56 66.1
A04p08060 Brassica napus HOM05D001038 ORTHO05D000395 7.2e-13 77.4 56 64.3
A05p23600 Brassica napus HOM05D001038 ORTHO05D018589 7.2e-13 77.4 69 50.7
BraA05t21228Z Brassica rapa HOM05D001038 ORTHO05D018589 7.2e-13 77.4 69 50.7
BraA02t08904Z Brassica rapa HOM05D001038 ORTHO05D000395 9.4e-13 77.0 65 56.9
BraA06t24005Z Brassica rapa HOM05D001038 ORTHO05D000395 9.4e-13 77.0 65 55.4
BolC5t32403H Brassica oleracea HOM05D001038 ORTHO05D016716 1.6e-12 76.3 65 55.4
BolC7t41881H Brassica oleracea HOM05D001038 ORTHO05D000395 1.6e-12 76.3 70 48.6
A02p12570 Brassica napus HOM05D001038 ORTHO05D000395 2.1e-12 75.9 84 48.8
BolC2t07185H Brassica oleracea HOM05D001038 ORTHO05D000395 2.1e-12 75.9 65 58.5
BolC7t43509H Brassica oleracea HOM05D001038 ORTHO05D000395 2.1e-12 75.9 69 50.7
BolC6t36762H Brassica oleracea HOM05D001038 ORTHO05D000395 2.7e-12 75.5 69 50.7
BolC8t47295H Brassica oleracea HOM05D001038 ORTHO05D000395 2.7e-12 75.5 65 58.5
A04p22180 Brassica napus HOM05D001038 ORTHO05D000395 3.6e-12 75.1 69 53.6
BraA10t43039Z Brassica rapa HOM05D001038 ORTHO05D000395 3.6e-12 75.1 69 53.6
BcaNung00229 Brassica carinata HOM05D001038 ORTHO05D000395 4.6e-12 74.7 89 46.1
BolC5t30492H Brassica oleracea HOM05D001038 ORTHO05D000395 4.6e-12 74.7 70 61.4
C06p00860 Brassica napus HOM05D001038 ORTHO05D000395 6.1e-12 74.3 67 50.7
BolC3t16968H Brassica oleracea HOM05D001038 ORTHO05D000395 6.1e-12 74.3 67 50.7
BolC7t41648H Brassica oleracea HOM05D001038 ORTHO05D000395 6.1e-12 74.3 81 49.4
BcaC06g35714 Brassica carinata HOM05D001038 ORTHO05D000395 1.0e-11 73.6 81 49.4
A09p58370 Brassica napus HOM05D001038 ORTHO05D000395 1.0e-11 73.6 67 50.7
C07p11750 Brassica napus HOM05D001038 ORTHO05D000395 1.0e-11 73.6 81 49.4
BraA05t21246Z Brassica rapa HOM05D001038 ORTHO05D000395 1.0e-11 73.6 88 46.6
BcaC01g04980 Brassica carinata HOM05D001038 ORTHO05D000395 1.4e-11 73.2 70 42.9
C09p45390 Brassica napus HOM05D001038 ORTHO05D024072 1.4e-11 73.2 67 55.2
A06p28660 Brassica napus HOM05D001038 ORTHO05D000395 1.8e-11 72.8 81 45.7
BolC3t20321H Brassica oleracea HOM05D001038 ORTHO05D000395 1.8e-11 72.8 67 50.7
BraA06t25806Z Brassica rapa HOM05D001038 ORTHO05D000395 1.8e-11 72.8 81 45.7
C04p46240 Brassica napus HOM05D001038 ORTHO05D000395 3.9e-11 71.6 46 73.9
BolC8t49550H Brassica oleracea HOM05D001038 ORTHO05D000395 5.1e-11 71.2 65 53.8
BcaNung02282 Brassica carinata HOM05D001038 ORTHO05D000395 8.8e-11 70.5 67 47.8
C09p68940 Brassica napus HOM05D001038 ORTHO05D000395 8.8e-11 70.5 67 47.8
BolC7t44786H Brassica oleracea HOM05D001038 ORTHO05D000395 8.8e-11 70.5 67 47.8
BcaB01g02362 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-10 70.1 81 44.4
BraA02t06821Z Brassica rapa HOM05D001038 ORTHO05D000395 1.1e-10 70.1 70 42.9
C07p60310 Brassica napus HOM05D001038 ORTHO05D000395 1.5e-10 69.7 70 40.0
AL3G41000 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 4.3e-10 68.2 72 48.6
AL6G49460 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 4.3e-10 68.2 72 48.6
BcaC07g37226 Brassica carinata HOM05D000048 ORTHO05D002390 5.7e-10 67.8 67 47.8
BcaB08g34364 Brassica carinata HOM05D001038 ORTHO05D000395 7.4e-10 67.4 67 44.8
BolC4t23574H Brassica oleracea HOM05D001038 ORTHO05D000395 7.4e-10 67.4 70 44.3
BolC4t24024H Brassica oleracea HOM05D001038 ORTHO05D000395 7.4e-10 67.4 69 47.8
BolC7t41662H Brassica oleracea HOM05D001038 ORTHO05D031981 7.4e-10 67.4 69 50.7
BraA08t32580Z Brassica rapa HOM05D001038 ORTHO05D000395 9.7e-10 67.0 67 43.3
BcaC09g51573 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-09 66.6 67 43.3
C07p07480 Brassica napus HOM05D001038 ORTHO05D000395 1.3e-09 66.6 70 42.9
BolC7t41164H Brassica oleracea HOM05D001038 ORTHO05D000395 1.3e-09 66.6 70 42.9
BcaB06g28542 Brassica carinata HOM05D001038 ORTHO05D000395 1.7e-09 66.2 67 44.8
C09p22250 Brassica napus HOM05D001038 ORTHO05D000395 1.7e-09 66.2 67 43.3
BcaB05g21586 Brassica carinata HOM05D001038 ORTHO05D000395 3.7e-09 65.1 70 40.0
BolC3t16999H Brassica oleracea HOM05D001038 ORTHO05D018639 3.7e-09 65.1 59 54.2
C05p34660 Brassica napus HOM05D001038 ORTHO05D000395 4.8e-09 64.7 67 43.3
BolC5t34489H Brassica oleracea HOM05D001038 ORTHO05D000395 4.8e-09 64.7 70 42.9
BraA03t11730Z Brassica rapa HOM05D001038 ORTHO05D000395 4.8e-09 64.7 63 46.0
AL5G24460 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 6.3e-09 64.3 69 49.3
BcaB01g01530 Brassica carinata HOM05D001038 ORTHO05D000395 6.3e-09 64.3 67 43.3
BcaC04g22192 Brassica carinata HOM05D001038 ORTHO05D017617 6.3e-09 64.3 67 41.8
BraA02t08028Z Brassica rapa HOM05D001038 ORTHO05D024222 6.3e-09 64.3 46 69.6
BNapus_Darmor_BZH_scaffold_97p00150 Brassica napus HOM05D001038 ORTHO05D000395 1.1e-08 63.5 69 44.9
C08p27920 Brassica napus HOM05D001038 ORTHO05D018639 1.1e-08 63.5 63 50.8
C09p35780 Brassica napus HOM05D001038 ORTHO05D000395 1.4e-08 63.2 71 49.3
BolC1t03990H Brassica oleracea HOM05D001038 ORTHO05D000395 1.4e-08 63.2 69 40.6
BolC7t44103H Brassica oleracea HOM05D001038 ORTHO05D000395 1.4e-08 63.2 63 42.9
BolC9t56412H Brassica oleracea HOM05D001038 ORTHO05D000395 1.4e-08 63.2 71 49.3
BcaC05g28246 Brassica carinata HOM05D001038 ORTHO05D031796 1.8e-08 62.8 67 41.8
C05p42760 Brassica napus HOM05D001038 ORTHO05D031796 1.8e-08 62.8 67 41.8
BraA06t25652Z Brassica rapa HOM05D001038 ORTHO05D000395 1.8e-08 62.8 53 54.7
A01p38280 Brassica napus HOM05D001038 ORTHO05D000395 2.4e-08 62.4 71 39.4
BraA09t41072Z Brassica rapa HOM05D001038 ORTHO05D000395 2.4e-08 62.4 71 39.4
Carub.0013s0014 Capsella rubella HOM05D001038 ORTHO05D000395 3.1e-08 62.0 73 39.7
BcaB06g28671 Brassica carinata HOM05D001038 ORTHO05D018639 4.1e-08 61.6 60 53.3
C06p26280 Brassica napus HOM05D001038 ORTHO05D000395 4.1e-08 61.6 63 42.9
Carub.0004s1123 Capsella rubella HOM05D001038 ORTHO05D000395 4.1e-08 61.6 73 41.1
C09p37880 Brassica napus HOM05D001038 ORTHO05D000395 5.3e-08 61.2 69 40.6
C09p69750 Brassica napus HOM05D001038 ORTHO05D017617 5.3e-08 61.2 63 41.3
BolC1t01148H Brassica oleracea HOM05D001038 ORTHO05D000395 5.3e-08 61.2 63 41.3
BolC9t55140H Brassica oleracea HOM05D001038 ORTHO05D000395 5.3e-08 61.2 63 41.3
BolC9t56621H Brassica oleracea HOM05D001038 ORTHO05D000395 5.3e-08 61.2 69 40.6
BolC9t59720H Brassica oleracea HOM05D001038 ORTHO05D000395 5.3e-08 61.2 63 41.3
BraA06t25335Z Brassica rapa HOM05D001038 ORTHO05D000395 5.3e-08 61.2 53 54.7
BcaB08g34623 Brassica carinata HOM05D001038 ORTHO05D000395 6.9e-08 60.8 71 40.8
BcaC06g33888 Brassica carinata HOM05D001038 ORTHO05D017617 6.9e-08 60.8 66 40.9
C07p11920 Brassica napus HOM05D001038 ORTHO05D031981 2.0e-07 59.3 69 44.9
BraA04t16612Z Brassica rapa HOM05D001038 ORTHO05D018639 2.0e-07 59.3 57 52.6
BolC6t37790H Brassica oleracea HOM05D001038 ORTHO05D000395 3.4e-07 58.5 63 41.3
BraA01t02128Z Brassica rapa HOM05D001038 ORTHO05D000395 3.4e-07 58.5 46 65.2
A07p30050 Brassica napus HOM05D001038 ORTHO05D000395 4.5e-07 58.2 75 42.7
C04p37080 Brassica napus HOM05D034669 ORTHO05D000395 4.5e-07 58.2 45 64.4
C03p47220 Brassica napus HOM05D001038 ORTHO05D000395 5.9e-07 57.8 42 69.0
SpUn0001_0050 Schrenkiella parvula HOM05D001038 ORTHO05D000395 5.9e-07 57.8 68 39.7
BcaB08g35558 Brassica carinata HOM05D001038 ORTHO05D000395 7.7e-07 57.4 67 38.8
C01p40340 Brassica napus HOM05D001038 ORTHO05D000395 1.7e-06 56.2 69 37.7
C07p19510 Brassica napus HOM05D001038 ORTHO05D000395 1.7e-06 56.2 68 44.1
AL782U10010 Arabidopsis lyrata HOM05D027702 ORTHO05D026776 2.2e-06 55.8 71 45.1
BcaC06g32026 Brassica carinata HOM05D001038 ORTHO05D000395 2.9e-06 55.5 52 53.8
BolC3t15766H Brassica oleracea HOM05D001038 ORTHO05D040320 3.8e-06 55.1 60 46.7
CARHR216710 Cardamine hirsuta HOM05D001038 ORTHO05D000395 3.8e-06 55.1 70 37.1
CARHR034790 Cardamine hirsuta HOM05D001038 ORTHO05D000395 5.0e-06 54.7 73 35.6
C03p34550 Brassica napus HOM05D001038 ORTHO05D040320 8.5e-06 53.9 61 45.9


User provided reference genes

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