Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g19664 Brassica carinata HOM05D004427 ORTHO05D005381 2.1e-120 435.6 209 100.0
BraA10t43818Z Brassica rapa HOM05D004427 ORTHO05D005381 5.0e-98 361.3 228 78.9
C09p52680 Brassica napus HOM05D004427 ORTHO05D005381 1.6e-96 356.3 174 98.3
BolC9t58136H Brassica oleracea HOM05D004427 ORTHO05D005381 1.6e-96 356.3 174 98.3
A10p17340 Brassica napus HOM05D004427 ORTHO05D005381 6.1e-96 354.4 225 77.8
BcaB08g36313 Brassica carinata HOM05D004427 ORTHO05D005381 1.6e-88 329.7 230 73.9
Sp6g21820 Schrenkiella parvula HOM05D004427 ORTHO05D005381 6.8e-87 324.3 225 70.2
BraA03t10444Z Brassica rapa HOM05D004427 ORTHO05D005381 5.7e-86 321.2 224 69.6
CARHR273870 Cardamine hirsuta HOM05D004427 ORTHO05D005381 5.7e-86 321.2 222 70.7
BcaB01g04643 Brassica carinata HOM05D004427 ORTHO05D005381 6.3e-85 317.8 224 68.3
A03p11310 Brassica napus HOM05D004427 ORTHO05D005381 6.3e-85 317.8 218 70.6
AT5G60190 Arabidopsis thaliana HOM05D004427 ORTHO05D005381 5.4e-84 314.7 228 68.9
C03p13030 Brassica napus HOM05D004427 ORTHO05D005381 2.0e-83 312.8 224 67.4
AL8G36800 Arabidopsis lyrata HOM05D004427 ORTHO05D005381 4.5e-83 311.6 222 67.6
AL817U10010 Arabidopsis lyrata HOM05D004427 ORTHO05D005381 5.9e-83 311.2 222 68.0
BolC3t13765H Brassica oleracea HOM05D004427 ORTHO05D005381 8.6e-82 307.4 218 67.4
Carub.0008s2094 Capsella rubella HOM05D004427 ORTHO05D005381 1.2e-80 303.5 228 66.7
Thhalv10014584m.g Eutrema salsugineum HOM05D004427 ORTHO05D005381 5.2e-79 298.1 224 68.8
Aa31LG1G12350 Aethionema arabicum HOM05D004427 ORTHO05D005381 6.8e-79 297.7 222 66.7
THA.LOC104799482 Tarenaya hassleriana HOM05D004427 ORTHO05D005381 1.5e-65 253.4 224 57.6
ClCG02G020830 Citrullus lanatus HOM05D004427 ORTHO05D005381 6.8e-55 218.0 230 49.6
Haze_23944 Corylus avellana HOM05D004427 ORTHO05D005381 3.4e-54 215.7 228 49.6
vmacro14479 Vaccinium macrocarpon HOM05D004427 ORTHO05D005381 7.5e-54 214.5 225 49.8
Cfa011378 Carpinus fangiana HOM05D004427 ORTHO05D005381 1.3e-53 213.8 228 49.6
Gorai.009G079500 Gossypium raimondii HOM05D004427 ORTHO05D005381 3.7e-53 212.2 228 48.2
TWI75G0497 Tripterygium wilfordii HOM05D004427 ORTHO05D005381 3.7e-53 212.2 231 48.5
Gohir.D05G078000 Gossypium hirsutum HOM05D004427 ORTHO05D005381 8.3e-53 211.1 228 47.8
Sopen05g001320 Solanum pennellii HOM05D004427 ORTHO05D005381 1.1e-52 210.7 228 46.5
CsaV3_6G021480 Cucumis sativus L. HOM05D004427 ORTHO05D005381 1.4e-52 210.3 229 47.2
PGSC0003DMG400013475 Solanum tuberosum HOM05D004427 ORTHO05D005381 2.4e-52 209.5 222 45.9
COL.COLO4_25263 Corchorus olitorius HOM05D004427 ORTHO05D005381 5.4e-52 208.4 228 47.4
MELO3C025732.2 Cucumis melo HOM05D004427 ORTHO05D005381 5.4e-52 208.4 224 48.7
Gohir.A05G075200 Gossypium hirsutum HOM05D004427 ORTHO05D005381 5.4e-52 208.4 228 46.9
Sed0015128 Sechium edule HOM05D004427 ORTHO05D005381 7.1e-52 208.0 220 47.7
Dinv10838 Davidia involucrata HOM05D004427 ORTHO05D005381 2.1e-51 206.5 225 47.6
Lj1C183T1 Lonicera japonica HOM05D004427 ORTHO05D005381 2.7e-51 206.1 220 48.2
Lj1C183T3 Lonicera japonica HOM05D004427 ORTHO05D005381 4.6e-51 205.3 220 46.8
Rhsim01G0221200 Rhododendron simsii HOM05D004427 ORTHO05D005381 4.6e-51 205.3 225 48.0
Hma1.2p1_2156F.1_g315430 Hydrangea macrophylla HOM05D004427 ORTHO05D005381 6.0e-51 204.9 225 48.0
TAR623G1453 Trochodendron aralioides HOM05D004427 ORTHO05D005381 6.0e-51 204.9 228 46.1
Ca_19237_v3 Cicer arietinum L. HOM05D004427 ORTHO05D005381 1.3e-50 203.8 229 47.2
QL01p036593 Quercus lobata HOM05D004427 ORTHO05D005381 1.3e-50 203.8 228 46.9
Lalb_Chr19g0137481 Lupinus albus HOM05D004427 ORTHO05D005381 1.7e-50 203.4 229 47.6
CiPaw.14G077000 Carya illinoinensis HOM05D004427 ORTHO05D005381 8.6e-50 201.1 231 46.8
Manes.04G026600 Manihot esculenta HOM05D004427 ORTHO05D005381 8.6e-50 201.1 227 48.5
TPR.G2989 Trifolium pratense HOM05D004427 ORTHO05D005381 8.6e-50 201.1 229 46.7
GSVIVG01025117001 Vitis vinifera HOM05D004427 ORTHO05D005381 1.5e-49 200.3 223 48.0
Ciclev10029217m.g Citrus clementina HOM05D004427 ORTHO05D005381 1.9e-49 199.9 228 46.9
Eucgr.J00959 Eucalyptus grandis HOM05D004427 ORTHO05D005381 1.9e-49 199.9 226 47.3
Duzib168G1361 Durio zibethinus HOM05D004427 ORTHO05D005381 2.5e-49 199.5 228 46.9
ECA233G4215 Erigeron canadensis HOM05D004427 ORTHO05D005381 2.5e-49 199.5 224 45.5
CAN.G354.26 Capsicum annuum HOM05D004427 ORTHO05D005381 4.3e-49 198.7 229 45.0
RcHm_v2.0_Chr5g0061241 Rosa chinensis HOM05D004427 ORTHO05D005381 5.6e-49 198.4 227 49.3
Aqoxy4G03193 Aquilegia oxysepala HOM05D004427 ORTHO05D005381 7.3e-49 198.0 227 44.9
AUR62037165 Chenopodium quinoa HOM05D004427 ORTHO05D005381 1.2e-48 197.2 224 45.5
Oeu062268.1 Olea europaea HOM05D004427 ORTHO05D005381 1.6e-48 196.8 225 45.8
PSO210G5092 Papaver somniferum HOM05D004427 ORTHO05D005381 2.1e-48 196.4 222 44.6
MSTRG.21151 Avicennia marina HOM05D004427 ORTHO05D005381 3.6e-48 195.7 215 46.0
Lj3g0007721 Lotus japonicus HOM05D004427 ORTHO05D005381 3.6e-48 195.7 228 46.9
PGR119G1466 Punica granatum HOM05D004427 ORTHO05D005381 3.6e-48 195.7 225 48.4
Duzib150G0661 Durio zibethinus HOM05D004427 ORTHO05D005381 1.4e-47 193.7 228 45.6
Thecc.09G261900 Theobroma cacao HOM05D004427 ORTHO05D005381 1.8e-47 193.4 228 46.5
Ah.02g113850 Amaranthus hybridus HOM05D004427 ORTHO05D005381 2.4e-47 193.0 221 45.7
CSS0010329 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 2.4e-47 193.0 222 46.8
Psat7g222000 Pisum sativum HOM05D004427 ORTHO05D005381 2.4e-47 193.0 229 46.3
FAN25G0902 Fragaria x ananassa HOM05D004427 ORTHO05D005381 3.1e-47 192.6 231 46.8
arahy.Tifrunner.gnm1.ann1.JL7YN4 Arachis hypogaea HOM05D004427 ORTHO05D005381 5.2e-47 191.8 226 46.0
FAN21G1733 Fragaria x ananassa HOM05D004427 ORTHO05D005381 5.2e-47 191.8 229 47.2
FAN16G3079 Fragaria x ananassa HOM05D004427 ORTHO05D005381 6.8e-47 191.4 229 47.6
FvH4_3g33710 Fragaria vesca HOM05D004427 ORTHO05D005381 8.9e-47 191.0 229 46.7
Glyma.12G072600 Glycine max HOM05D004427 ORTHO05D005381 8.9e-47 191.0 226 46.5
Medtr4g061080 Medicago truncatula HOM05D004427 ORTHO05D005381 8.9e-47 191.0 230 46.1
AUR62025117 Chenopodium quinoa HOM05D004427 ORTHO05D005381 1.2e-46 190.7 224 44.2
Nn2g10653 Nelumbo nucifera HOM05D004427 ORTHO05D005381 1.5e-46 190.3 228 44.3
arahy.Tifrunner.gnm1.ann1.T6X9B2 Arachis hypogaea HOM05D004427 ORTHO05D005381 2.0e-46 189.9 226 45.1
EL10Ac9g22377 Beta vulgaris HOM05D004427 ORTHO05D005381 2.0e-46 189.9 227 45.8
CAN.G765.37 Capsicum annuum HOM05D004427 ORTHO05D005381 2.0e-46 189.9 223 43.0
CANSAT54G0683 Cannabis sativa HOM05D004427 ORTHO05D005381 2.6e-46 189.5 224 44.2
Cc01_g11690 Coffea canephora HOM05D004427 ORTHO05D005381 2.6e-46 189.5 221 41.2
Nitab4.5_0000100g0070 Nicotiana tabacum HOM05D004427 ORTHO05D005381 4.4e-46 188.7 200 46.0
Nitab4.5_0000607g0030 Nicotiana tabacum HOM05D004427 ORTHO05D005381 5.8e-46 188.3 205 46.3
FAN11G1819 Fragaria x ananassa HOM05D004427 ORTHO05D005381 9.9e-46 187.6 229 46.7
Phvul.011G071700 Phaseolus vulgaris HOM05D004427 ORTHO05D005381 1.3e-45 187.2 226 43.8
VMungo1127G1062 Vigna mungo HOM05D004427 ORTHO05D005381 1.3e-45 187.2 220 44.5
unitig_0.g1522 Utricularia gibba HOM05D004427 ORTHO05D005381 2.2e-45 186.4 224 40.2
HanXRQChr02g0051371 Helianthus annuus HOM05D004427 ORTHO05D005381 4.9e-45 185.3 224 44.2
Lsat_1_v5_gn_6_24041 Lactuca sativa HOM05D004427 ORTHO05D005381 4.9e-45 185.3 221 43.4
Migut.N02630 Erythranthe guttata HOM05D004427 ORTHO05D005381 5.4e-44 181.8 224 42.9
Prupe.6G092400 Prunus persica HOM05D004427 ORTHO05D005381 9.2e-44 181.0 226 43.8
CSS0013146 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 7.8e-43 177.9 227 43.6
MD11G1123000 Malus domestica HOM05D004427 ORTHO05D005381 1.3e-42 177.2 220 46.8
CSS0042497 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 1.7e-42 176.8 225 44.4
SGA_v2.0_scaffold80G25743 Striga asiatica HOM05D004427 ORTHO05D005381 3.3e-41 172.6 226 42.9
Peaxi162Scf00155g00071 Petunia axillaris HOM05D004427 ORTHO05D005381 9.6e-41 171.0 203 42.9
ATR0069G023 Amborella trichopoda HOM05D004427 ORTHO05D005381 1.1e-39 167.5 224 38.8
MD09G1211300 Malus domestica HOM05D004427 ORTHO05D005381 1.1e-39 167.5 220 45.5
PSO210G2821 Papaver somniferum HOM05D004427 ORTHO05D005381 1.1e-36 157.5 223 39.9
CSS0008575 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 2.1e-35 153.3 181 44.8
QL03p001209 Quercus lobata HOM05D004427 ORTHO05D005381 6.6e-34 148.3 250 34.8
CSS0048170 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 8.7e-34 147.9 219 40.6
SHI06027 Sapria himalayana HOM05D004427 ORTHO05D005381 2.4e-31 139.8 217 41.0
Solyc05g005310.3 Solanum lycopersicum HOM05D004427 ORTHO05D005381 3.1e-31 139.4 152 44.7
SEGI_39191 Sequoiadendron giganteum HOM05D004427 ORTHO05D005381 1.2e-30 137.5 219 39.3
Sabra13G0002300 Salix brachista HOM05D004427 ORTHO05D005381 6.4e-29 131.7 243 35.4
Potri.013G002700 Populus trichocarpa HOM05D004427 ORTHO05D005381 5.4e-28 128.6 242 35.5
TAR371G1244 Trochodendron aralioides HOM05D004427 ORTHO05D005381 7.9e-27 124.8 254 31.1
QL01p000714 Quercus lobata HOM05D004427 ORTHO05D005381 1.0e-26 124.4 238 33.2
AagrBONN_evm.TU.Sc2ySwM_344.2535 Anthoceros agrestis HOM05D004427 ORTHO05D005381 1.3e-26 124.0 227 33.9
TAR629G2862 Trochodendron aralioides HOM05D004427 ORTHO05D005381 1.3e-26 124.0 243 32.1
Zm00001eb413910 Zea mays HOM05D004427 ORTHO05D005381 1.8e-26 123.6 230 36.1
TAR376G0174 Trochodendron aralioides HOM05D004427 ORTHO05D005381 3.0e-26 122.9 251 30.7
Mapoly0009s0037 Marchantia polymorpha HOM05D004427 ORTHO05D005381 1.1e-25 120.9 229 32.3
Os12g0102350 Oryza sativa ssp. japonica HOM05D004427 ORTHO05D005381 1.1e-25 120.9 226 35.4
Os11g0102700 Oryza sativa ssp. japonica HOM05D004427 ORTHO05D005381 1.5e-25 120.6 227 35.7
CSS0032605 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 7.4e-25 118.2 196 37.8
CDE04G2448 Ceratophyllum demersum HOM05D004427 ORTHO05D005381 1.3e-24 117.5 169 39.1
Ah.02g123640 Amaranthus hybridus HOM05D004427 ORTHO05D005381 1.6e-24 117.1 229 31.9
AUR62003115 Chenopodium quinoa HOM05D004427 ORTHO05D005381 3.7e-24 115.9 226 33.6
TAR371G1167 Trochodendron aralioides HOM05D004427 ORTHO05D005381 6.2e-24 115.2 230 31.7
vmacro14781 Vaccinium macrocarpon HOM05D004427 ORTHO05D005381 3.1e-23 112.8 208 32.7
Sc06g0007950 Simmondsia chinensis HOM05D004427 ORTHO05D005381 9.0e-23 111.3 137 44.5
EL10Ac8g19614 Beta vulgaris HOM05D004427 ORTHO05D005381 2.0e-22 110.2 271 28.8
DCAR_002673 Daucus carota HOM05D004427 ORTHO05D005381 3.4e-22 109.4 226 29.6
SMO367G1171 Selaginella moellendorffii HOM05D002435 ORTHO05D002550 3.4e-22 109.4 183 34.4
Pp3c21_14830 Physcomitrium patens HOM05D004427 ORTHO05D005381 7.6e-22 108.2 242 30.2
Lj3A845T93 Lonicera japonica HOM05D004427 ORTHO05D005381 1.3e-21 107.5 184 35.3
Hund22380 Selenicereus undatus HOM05D004427 ORTHO05D005381 1.3e-21 107.5 234 30.3
Actinidia09505 Actinidia chinensis HOM05D004427 ORTHO05D005381 4.9e-21 105.5 142 43.0
EL10Ac9g22643 Beta vulgaris HOM05D004427 ORTHO05D005381 4.9e-21 105.5 266 27.1
Ah.03g139880 Amaranthus hybridus HOM05D004427 ORTHO05D005381 6.5e-21 105.1 264 28.8
Ah.02g123630 Amaranthus hybridus HOM05D004427 ORTHO05D005381 1.6e-19 100.5 264 28.4
CAN.G682.5 Capsicum annuum HOM05D004427 ORTHO05D005381 2.7e-19 99.8 110 40.0
DCAR_026152 Daucus carota HOM05D004427 ORTHO05D005381 7.9e-19 98.2 181 32.0
EL10Ac5g12984 Beta vulgaris HOM05D004427 ORTHO05D005381 1.0e-18 97.8 237 28.3
Lj1C183G2 Lonicera japonica HOM05D004427 ORTHO05D005381 3.0e-18 96.3 102 42.2
Prupe.1G350400 Prunus persica HOM05D004427 ORTHO05D005381 2.5e-17 93.2 151 33.1
MD00G1127100 Malus domestica HOM05D004427 ORTHO05D005381 3.3e-17 92.8 150 35.3
DCAR_012615 Daucus carota HOM05D004427 ORTHO05D005381 1.6e-16 90.5 202 29.7
Cre01.g055050 Chlamydomonas reinhardtii HOM05D004427 ORTHO05D005381 2.8e-16 89.7 212 31.6
Manes.11G140201 Manihot esculenta HOM05D004427 ORTHO05D005381 1.4e-15 87.4 129 42.6
MCO07G761 Micromonas commoda HOM05D004427 ORTHO05D005381 1.4e-15 87.4 226 26.1
CSS0019084 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 1.8e-15 87.0 225 30.2
AUR62037167 Chenopodium quinoa HOM05D004427 ORTHO05D005381 1.8e-15 87.0 77 49.4
AUR62032911 Chenopodium quinoa HOM05D004427 ORTHO05D005381 4.0e-15 85.9 253 27.3
RcHm_v2.0_Chr4g0447061 Rosa chinensis HOM05D004427 ORTHO05D005381 9.0e-15 84.7 139 33.1
Os12g0127600 Oryza sativa ssp. japonica HOM05D004427 ORTHO05D005381 1.2e-14 84.3 129 37.2
CSS0026652 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 4.5e-14 82.4 225 29.8
CBR_g4323 Chara braunii HOM05D004427 ORTHO05D005381 5.8e-14 82.0 184 28.3
Os12g0103580 Oryza sativa ssp. japonica HOM05D004427 ORTHO05D005381 2.2e-13 80.1 147 34.0
FAN07G0825 Fragaria x ananassa HOM05D000639 ORTHO05D006731 2.9e-13 79.7 207 26.1
FvH4_4g37251 Fragaria vesca HOM05D004427 ORTHO05D005381 3.8e-13 79.3 138 31.2
FvH4_6g48790 Fragaria vesca HOM05D004427 ORTHO05D005381 2.5e-12 76.6 310 23.2
FAN02G3329 Fragaria x ananassa HOM05D004427 ORTHO05D005381 1.6e-11 73.9 139 33.1
FAN05G2706 Fragaria x ananassa HOM05D004427 ORTHO05D005381 2.7e-11 73.2 139 33.1
FAN17G0618 Fragaria x ananassa HOM05D000639 ORTHO05D006731 1.0e-10 71.2 91 35.2
RcHm_v2.0_Chr4g0387651 Rosa chinensis HOM05D028185 ORTHO05D025555 1.6e-08 63.9 152 27.0
Cfa026731 Carpinus fangiana HOM05D004427 ORTHO05D005381 8.2e-08 61.6 118 31.4
Rhsim01G0258900 Rhododendron simsii HOM05D004427 ORTHO05D005381 1.5e-06 57.4 70 37.1
FAN12G0369 Fragaria x ananassa HOM05D028185 ORTHO05D025555 2.0e-06 57.0 91 30.8
FAN17G0248 Fragaria x ananassa HOM05D004427 ORTHO05D025555 4.5e-06 55.8 91 30.8


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