Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g19497 Brassica carinata HOM05D001598 ORTHO05D007192 1.4e-63 246.1 121 100.0
BcaB08g37330 Brassica carinata HOM05D001598 ORTHO05D007192 1.8e-52 209.1 121 90.1
MSTRG.12417 Avicennia marina HOM05D001598 ORTHO05D007192 5.2e-23 111.3 90 67.8
Rhsim01G0197500 Rhododendron simsii HOM05D001598 ORTHO05D007192 5.2e-23 111.3 92 67.4
Potri.009G156400 Populus trichocarpa HOM05D001598 ORTHO05D007192 1.5e-22 109.8 90 66.7
vmacro14297 Vaccinium macrocarpon HOM05D001598 ORTHO05D007192 2.0e-22 109.4 92 65.2
DCAR_000741 Daucus carota HOM05D001598 ORTHO05D007192 2.6e-22 109.0 97 62.9
Atru.ctg664.11 Acer truncatum HOM05D001598 ORTHO05D007192 4.4e-22 108.2 93 63.4
Hma1.2p1_0218F.1_g092460 Hydrangea macrophylla HOM05D001598 ORTHO05D007192 4.4e-22 108.2 90 65.6
Atru.chr3.2751 Acer truncatum HOM05D001598 ORTHO05D007192 5.8e-22 107.8 93 63.4
Actinidia22467 Actinidia chinensis HOM05D001598 ORTHO05D007192 5.8e-22 107.8 92 65.2
Dinv32128 Davidia involucrata HOM05D001598 ORTHO05D007192 5.8e-22 107.8 90 65.6
AUR62001598 Chenopodium quinoa HOM05D001598 ORTHO05D007192 7.5e-22 107.5 90 64.4
Eucgr.J00614 Eucalyptus grandis HOM05D001598 ORTHO05D007192 7.5e-22 107.5 90 65.6
Ah.08g222590 Amaranthus hybridus HOM05D001598 ORTHO05D007192 9.8e-22 107.1 93 64.5
Sabra09G0122500 Salix brachista HOM05D001598 ORTHO05D007192 1.3e-21 106.7 90 64.4
Hund20974 Selenicereus undatus HOM05D001598 ORTHO05D007192 1.3e-21 106.7 90 63.3
Ciclev10014503m.g Citrus clementina HOM05D001598 ORTHO05D007192 1.7e-21 106.3 90 64.4
COL.COLO4_25318 Corchorus olitorius HOM05D001598 ORTHO05D007192 1.7e-21 106.3 104 58.7
Thecc.09G265000 Theobroma cacao HOM05D001598 ORTHO05D007192 1.7e-21 106.3 90 64.4
AT5G20990 Arabidopsis thaliana HOM05D001598 ORTHO05D007192 2.9e-21 105.5 91 67.0
Carub.0006s1931 Capsella rubella HOM05D001598 ORTHO05D007192 2.9e-21 105.5 97 63.9
CARHR191850 Cardamine hirsuta HOM05D001598 ORTHO05D007192 2.9e-21 105.5 91 67.0
Thhalv10012894m.g Eutrema salsugineum HOM05D001598 ORTHO05D007192 2.9e-21 105.5 92 68.5
Gohir.A05G076000 Gossypium hirsutum HOM05D001598 ORTHO05D007192 2.9e-21 105.5 90 63.3
Gohir.D05G078700 Gossypium hirsutum HOM05D001598 ORTHO05D007192 2.9e-21 105.5 90 63.3
Gorai.009G080100 Gossypium raimondii HOM05D001598 ORTHO05D007192 2.9e-21 105.5 90 63.3
A03p10390 Brassica napus HOM05D001598 ORTHO05D007192 3.7e-21 105.1 92 68.5
AUR62020182 Chenopodium quinoa HOM05D001598 ORTHO05D007192 3.7e-21 105.1 90 64.4
SGA_v2.0_scaffold16G07584 Striga asiatica HOM05D001598 ORTHO05D007192 3.7e-21 105.1 90 65.6
TWI31G0930 Tripterygium wilfordii HOM05D001598 ORTHO05D007192 4.9e-21 104.8 90 63.3
Aa31LG1G13740 Aethionema arabicum HOM05D001598 ORTHO05D007192 6.4e-21 104.4 90 64.4
PSO063G3947 Papaver somniferum HOM05D001598 ORTHO05D007192 6.4e-21 104.4 90 64.4
AL6G32560 Arabidopsis lyrata HOM05D001598 ORTHO05D007192 8.3e-21 104.0 91 65.9
Nitab4.5_0002300g0120 Nicotiana tabacum HOM05D001598 ORTHO05D007192 8.3e-21 104.0 90 62.2
CiPaw.13G127200 Carya illinoinensis HOM05D001598 ORTHO05D007192 1.1e-20 103.6 90 63.3
Cc01_g07890 Coffea canephora HOM05D001598 ORTHO05D007192 1.1e-20 103.6 90 62.2
FAN11G2542 Fragaria x ananassa HOM05D001598 ORTHO05D007192 1.1e-20 103.6 90 63.3
FAN21G0325 Fragaria x ananassa HOM05D001598 ORTHO05D007192 1.1e-20 103.6 90 63.3
FAN25G1601 Fragaria x ananassa HOM05D001598 ORTHO05D007192 1.1e-20 103.6 90 63.3
MBI07_g03077_MAGBIO Magnolia biondii HOM05D001598 ORTHO05D007192 1.1e-20 103.6 90 61.1
BcaB08g37328 Brassica carinata HOM05D001598 ORTHO05D007192 1.4e-20 103.2 87 67.8
Lalb_Chr10g0105801 Lupinus albus HOM05D001598 ORTHO05D007192 1.4e-20 103.2 90 61.1
TAR375G0698 Trochodendron aralioides HOM05D001598 ORTHO05D007192 1.4e-20 103.2 90 62.2
GSVIVG01037501001 Vitis vinifera HOM05D001598 ORTHO05D007192 1.4e-20 103.2 90 62.2
Nitab4.5_0000428g0110 Nicotiana tabacum HOM05D001598 ORTHO05D007192 1.9e-20 102.8 90 61.1
Solyc01g009050.3 Solanum lycopersicum HOM05D001598 ORTHO05D007192 1.9e-20 102.8 90 61.1
Sopen01g004540 Solanum pennellii HOM05D001598 ORTHO05D007192 1.9e-20 102.8 90 61.1
CAN.G651.7 Capsicum annuum HOM05D001598 ORTHO05D007192 2.4e-20 102.4 90 61.1
ECA247G1799 Erigeron canadensis HOM05D001598 ORTHO05D007192 2.4e-20 102.4 92 62.0
Phvul.008G209600 Phaseolus vulgaris HOM05D001598 ORTHO05D007192 2.4e-20 102.4 90 62.2
PGR119G0245 Punica granatum HOM05D001598 ORTHO05D007192 2.4e-20 102.4 92 62.0
unitig_8.g2986 Utricularia gibba HOM05D001598 ORTHO05D007192 2.4e-20 102.4 90 61.1
VMungo0647G2429 Vigna mungo HOM05D001598 ORTHO05D007192 2.4e-20 102.4 90 62.2
CSS0038227 Camellia sinensis var. sinensis HOM05D001598 ORTHO05D007192 3.2e-20 102.1 88 63.6
Oeu051504.1 Olea europaea HOM05D001598 ORTHO05D007192 3.2e-20 102.1 90 62.2
Peaxi162Scf00050g02227 Petunia axillaris HOM05D001598 ORTHO05D007192 3.2e-20 102.1 90 61.1
Zm00001eb432770 Zea mays HOM05D001598 ORTHO05D007192 3.2e-20 102.1 90 62.2
RcHm_v2.0_Chr5g0048741 Rosa chinensis HOM05D001598 ORTHO05D007192 4.1e-20 101.7 90 62.2
EL10Ac7g16239 Beta vulgaris HOM05D001598 ORTHO05D007192 7.0e-20 100.9 93 61.3
TPR.G11692 Trifolium pratense HOM05D001598 ORTHO05D007192 7.0e-20 100.9 90 61.1
CSS0046041 Camellia sinensis var. sinensis HOM05D001598 ORTHO05D007192 9.2e-20 100.5 106 54.7
Migut.N02410 Erythranthe guttata HOM05D001598 ORTHO05D007192 9.2e-20 100.5 93 63.4
Psat2g023160 Pisum sativum HOM05D001598 ORTHO05D007192 9.2e-20 100.5 90 61.1
BolC3t13663H Brassica oleracea HOM05D001598 ORTHO05D007192 1.2e-19 100.1 93 63.4
BraA03t10351Z Brassica rapa HOM05D001598 ORTHO05D007192 1.2e-19 100.1 93 63.4
MELO3C015599.2 Cucumis melo HOM05D001598 ORTHO05D007192 1.2e-19 100.1 90 60.0
ClCG03G014390 Citrullus lanatus HOM05D001598 ORTHO05D007192 1.6e-19 99.8 90 60.0
SalBow3G4459 Salvia bowleyana HOM05D001598 ORTHO05D007192 1.6e-19 99.8 92 60.9
HanXRQChr06g0180651 Helianthus annuus HOM05D001598 ORTHO05D007192 2.0e-19 99.4 92 59.8
Lj2A895T22 Lonicera japonica HOM05D001598 ORTHO05D007192 2.0e-19 99.4 104 55.8
LjContig00564g0017485 Lotus japonicus HOM05D001598 ORTHO05D007192 2.0e-19 99.4 90 60.0
CsaV3_1G041840 Cucumis sativus L. HOM05D001598 ORTHO05D007192 2.7e-19 99.0 90 58.9
Medtr5g087490 Medicago truncatula HOM05D001598 ORTHO05D007192 2.7e-19 99.0 90 60.0
CANSAT54G2824 Cannabis sativa HOM05D001598 ORTHO05D007192 4.6e-19 98.2 90 61.1
Glyma.02G272700 Glycine max HOM05D001598 ORTHO05D007192 4.6e-19 98.2 90 60.0
HPP92_013448 Vanilla planifolia HOM05D001598 ORTHO05D007192 4.6e-19 98.2 90 58.9
Cpa.g.sc34.224 Carica papaya HOM05D001598 ORTHO05D007192 7.8e-19 97.4 90 60.0
MD11G1181200 Malus domestica HOM05D001598 ORTHO05D007192 7.8e-19 97.4 90 60.0
HPP92_013469 Vanilla planifolia HOM05D001598 ORTHO05D007192 7.8e-19 97.4 90 58.9
Aqoxy3G02341 Aquilegia oxysepala HOM05D001598 ORTHO05D007192 1.0e-18 97.1 97 55.7
ATR0215G007 Amborella trichopoda HOM05D001598 ORTHO05D007192 1.3e-18 96.7 90 56.7
C03p11930 Brassica napus HOM05D001598 ORTHO05D007192 1.7e-18 96.3 91 62.6
CDE06G2705 Ceratophyllum demersum HOM05D001598 ORTHO05D007192 1.7e-18 96.3 90 56.7
Sed0001025 Sechium edule HOM05D001598 ORTHO05D007192 1.7e-18 96.3 90 58.9
Lsat_1_v5_gn_2_37520 Lactuca sativa HOM05D001598 ORTHO05D007192 3.0e-18 95.5 92 58.7
C09p55070 Brassica napus HOM05D001400 ORTHO05D001795 3.9e-18 95.1 60 81.7
arahy.Tifrunner.gnm1.ann1.4UW9RQ Arachis hypogaea HOM05D001598 ORTHO05D007192 6.6e-18 94.4 90 56.7
arahy.Tifrunner.gnm1.ann1.IS34PQ Arachis hypogaea HOM05D001598 ORTHO05D007192 6.6e-18 94.4 90 56.7
Haze_23633 Corylus avellana HOM05D001598 ORTHO05D007192 8.6e-18 94.0 86 60.5
Nn1g08035 Nelumbo nucifera HOM05D001598 ORTHO05D007192 1.1e-17 93.6 83 59.0
BolC9t58371H Brassica oleracea HOM05D001400 ORTHO05D001795 4.3e-17 91.7 51 90.2
Ca_06138_v3 Cicer arietinum L. HOM05D001598 ORTHO05D007192 2.8e-16 89.0 83 59.0
Pp3c14_4050 Physcomitrium patens HOM05D001598 ORTHO05D007192 2.8e-16 89.0 92 55.4
SEGI_37017 Sequoiadendron giganteum HOM05D001598 ORTHO05D007192 1.1e-15 87.0 88 52.3
Sp6g23530 Schrenkiella parvula HOM05D001598 ORTHO05D007192 1.8e-15 86.3 90 57.8
AagrBONN_evm.TU.Sc2ySwM_228.3025 Anthoceros agrestis HOM05D001598 ORTHO05D007192 6.8e-15 84.3 102 46.1
Mapoly1495s0001 Marchantia polymorpha HOM05D001598 ORTHO05D007192 3.4e-14 82.0 91 52.7
SMO145G0256 Selaginella moellendorffii HOM05D001598 ORTHO05D007192 3.4e-14 82.0 91 49.5
SEGI_32063 Sequoiadendron giganteum HOM05D001598 ORTHO05D007192 2.2e-13 79.3 82 51.2
QL01p007286 Quercus lobata HOM05D001598 ORTHO05D007192 6.4e-13 77.8 57 68.4
TAR374G1328 Trochodendron aralioides HOM05D001598 ORTHO05D007192 6.0e-11 71.2 62 62.9
CDE02G2133 Ceratophyllum demersum HOM05D001598 ORTHO05D007192 7.8e-11 70.9 57 59.6
CBR_g53769 Chara braunii HOM05D000019 ORTHO05D000002 3.6e-08 62.0 50 58.0


User provided reference genes

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