Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g14498 Brassica carinata HOM05D002465 ORTHO05D008860 2.9e-174 615.1 315 100.0
C02p19370 Brassica napus HOM05D002465 ORTHO05D005308 2.5e-162 575.5 321 92.5
BraA02t06223Z Brassica rapa HOM05D002465 ORTHO05D005308 3.3e-162 575.1 321 92.5
BcaB05g21982 Brassica carinata HOM05D002465 ORTHO05D008860 1.6e-161 572.8 323 92.0
A02p11610 Brassica napus HOM05D002465 ORTHO05D005308 2.1e-161 572.4 321 91.9
AT5G52810 Arabidopsis thaliana HOM05D002465 ORTHO05D008860 1.5e-151 539.7 323 85.1
Thhalv10014103m.g Eutrema salsugineum HOM05D002465 ORTHO05D008860 7.7e-151 537.3 323 86.7
AL8G27240 Arabidopsis lyrata HOM05D002465 ORTHO05D008860 1.7e-150 536.2 323 85.1
BolC2t08072H Brassica oleracea HOM05D002465 ORTHO05D005308 1.7e-150 536.2 307 90.9
CARHR265740 Cardamine hirsuta HOM05D002465 ORTHO05D008860 1.4e-147 526.6 326 83.1
Aa31LG3G9050 Aethionema arabicum HOM05D002465 ORTHO05D008860 1.5e-146 523.1 324 82.7
Sp6g14950 Schrenkiella parvula HOM05D002465 ORTHO05D005308 4.2e-141 505.0 307 86.0
THA.LOC104811948 Tarenaya hassleriana HOM05D002465 ORTHO05D008860 6.5e-134 481.1 319 76.8
Atru.chr1.341 Acer truncatum HOM05D002465 ORTHO05D008860 1.2e-116 423.7 319 67.7
Prupe.2G302000 Prunus persica HOM05D002465 ORTHO05D008860 1.2e-116 423.7 320 65.9
Ciclev10006645m.g Citrus clementina HOM05D002465 ORTHO05D008860 2.1e-116 422.9 315 69.2
Gohir.D12G255800 Gossypium hirsutum HOM05D002465 ORTHO05D008860 4.0e-115 418.7 321 67.3
Gohir.A12G253500 Gossypium hirsutum HOM05D002465 ORTHO05D008860 8.8e-115 417.5 321 67.3
Gorai.008G273900 Gossypium raimondii HOM05D002465 ORTHO05D008860 2.0e-114 416.4 321 66.7
Duzib205G0883 Durio zibethinus HOM05D002465 ORTHO05D008860 2.6e-114 416.0 320 66.9
Cfa016296 Carpinus fangiana HOM05D002465 ORTHO05D008860 3.4e-114 415.6 317 66.9
COL.COLO4_30296 Corchorus olitorius HOM05D002465 ORTHO05D008860 5.7e-114 414.8 320 65.9
Thecc.03G185600 Theobroma cacao HOM05D002465 ORTHO05D008860 1.7e-113 413.3 317 66.9
FAN01G0734 Fragaria x ananassa HOM05D002465 ORTHO05D008860 2.8e-113 412.5 320 66.2
FAN06G4105 Fragaria x ananassa HOM05D002465 ORTHO05D008860 2.8e-113 412.5 320 66.2
QL09p012523 Quercus lobata HOM05D002465 ORTHO05D008860 2.8e-113 412.5 320 65.3
Cpa.g.sc107.122 Carica papaya HOM05D002465 ORTHO05D008860 3.7e-113 412.1 317 66.2
CANSAT21G1380 Cannabis sativa HOM05D002465 ORTHO05D008860 3.1e-112 409.1 319 64.3
FvH4_7g30420 Fragaria vesca HOM05D002465 ORTHO05D008860 3.1e-112 409.1 320 65.9
FAN03G2954 Fragaria x ananassa HOM05D002465 ORTHO05D008860 5.4e-112 408.3 320 65.3
CiPaw.05G261500 Carya illinoinensis HOM05D002465 ORTHO05D008860 7.0e-112 407.9 319 65.8
MD07G1279900 Malus domestica HOM05D002465 ORTHO05D008860 7.0e-112 407.9 318 64.2
FAN10G1848 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.2e-111 407.1 320 65.3
Medtr1g099620 Medicago truncatula HOM05D002465 ORTHO05D008860 2.0e-111 406.4 323 64.1
FAN06G0587 Fragaria x ananassa HOM05D002465 ORTHO05D008860 2.7e-111 406.0 320 65.6
Glyma.20G163100 Glycine max HOM05D002465 ORTHO05D008860 4.5e-111 405.2 323 65.0
FAN10G3921 Fragaria x ananassa HOM05D002465 ORTHO05D008860 5.9e-111 404.8 320 65.3
Sabra04G0047800 Salix brachista HOM05D002465 ORTHO05D008860 1.3e-110 403.7 323 66.6
Manes.14G021500 Manihot esculenta HOM05D002465 ORTHO05D008860 2.3e-110 402.9 317 67.8
Lalb_Chr02g0141271 Lupinus albus HOM05D002465 ORTHO05D008860 3.8e-110 402.1 320 64.7
TWI23G0306 Tripterygium wilfordii HOM05D002465 ORTHO05D008860 3.8e-110 402.1 321 66.0
TPR.G7770 Trifolium pratense HOM05D002465 ORTHO05D008860 8.6e-110 401.0 322 64.3
Potri.004G072500 Populus trichocarpa HOM05D002465 ORTHO05D008860 1.5e-109 400.2 323 65.6
Haze_00056 Corylus avellana HOM05D002465 ORTHO05D008860 2.5e-109 399.4 312 65.4
Lj5g0014102 Lotus japonicus HOM05D002465 ORTHO05D008860 3.3e-109 399.1 327 63.0
VMungo0720G1208 Vigna mungo HOM05D002465 ORTHO05D008860 4.7e-108 395.2 323 64.1
CAN.G204.25 Capsicum annuum HOM05D002465 ORTHO05D008860 1.8e-107 393.3 320 60.6
Ca_10714_v3 Cicer arietinum L. HOM05D002465 ORTHO05D008860 3.0e-107 392.5 322 62.1
PGSC0003DMG400037424 Solanum tuberosum HOM05D002465 ORTHO05D008860 4.0e-107 392.1 324 59.6
PGSC0003DMG402028895 Solanum tuberosum HOM05D002465 ORTHO05D008860 4.0e-107 392.1 324 59.6
arahy.Tifrunner.gnm1.ann1.R026RD Arachis hypogaea HOM05D002465 ORTHO05D008860 1.2e-106 390.6 322 63.4
Sopen06g012110 Solanum pennellii HOM05D002465 ORTHO05D008860 4.4e-106 388.7 320 59.1
Solyc06g036330.1 Solanum lycopersicum HOM05D002465 ORTHO05D008860 2.9e-105 386.0 320 58.4
PGR142G3674 Punica granatum HOM05D002465 ORTHO05D008860 4.1e-104 382.1 323 61.3
Phvul.007G075300 Phaseolus vulgaris HOM05D002465 ORTHO05D008860 5.4e-104 381.7 324 62.0
CSS0010708 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D008860 9.2e-104 380.9 318 62.6
Psat6g195800 Pisum sativum HOM05D002465 ORTHO05D008860 9.2e-104 380.9 322 60.6
ClCG05G008460 Citrullus lanatus HOM05D002465 ORTHO05D008860 1.6e-103 380.2 321 61.4
Sed0017948 Sechium edule HOM05D002465 ORTHO05D008860 4.6e-103 378.6 317 62.1
DCAR_014522 Daucus carota HOM05D002465 ORTHO05D008860 1.7e-102 376.7 315 61.9
Dinv35265 Davidia involucrata HOM05D002465 ORTHO05D008860 5.0e-102 375.2 299 63.2
Cc02_g02280 Coffea canephora HOM05D002465 ORTHO05D008860 6.6e-102 374.8 322 59.9
Ah.07g206480 Amaranthus hybridus HOM05D002465 ORTHO05D008860 4.7e-100 368.6 320 59.4
AUR62031433 Chenopodium quinoa HOM05D002465 ORTHO05D008860 1.8e-99 366.7 316 60.4
CsaV3_3G017540 Cucumis sativus L. HOM05D002465 ORTHO05D008860 3.1e-99 365.9 317 60.6
QL09p012480 Quercus lobata HOM05D002465 ORTHO05D008860 5.2e-99 365.2 320 60.9
MELO3C006954.2 Cucumis melo HOM05D002465 ORTHO05D008860 2.6e-98 362.8 316 60.1
Nitab4.5_0004854g0030 Nicotiana tabacum HOM05D002465 ORTHO05D008860 9.8e-98 360.9 283 61.8
EL10Ac3g05401 Beta vulgaris HOM05D002465 ORTHO05D008860 1.3e-97 360.5 318 59.1
Aqoxy5G00658 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 2.2e-97 359.8 322 58.4
MBI11_g09066_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D008860 4.9e-97 358.6 318 57.2
Nn6g32108 Nelumbo nucifera HOM05D002465 ORTHO05D008860 4.9e-97 358.6 321 56.4
Nn6g32109 Nelumbo nucifera HOM05D002465 ORTHO05D008860 4.9e-97 358.6 321 56.4
PSO478G0039 Papaver somniferum HOM05D002465 ORTHO05D008860 7.8e-95 351.3 321 57.0
Peaxi162Scf00618g00066 Petunia axillaris HOM05D002465 ORTHO05D008860 3.3e-93 345.9 269 62.5
SalBow2G2390 Salvia bowleyana HOM05D002465 ORTHO05D008860 9.5e-93 344.4 321 56.1
arahy.Tifrunner.gnm1.ann1.9T5AB0 Arachis hypogaea HOM05D002465 ORTHO05D008860 1.6e-92 343.6 321 58.3
Migut.F01082 Erythranthe guttata HOM05D002465 ORTHO05D008860 1.4e-91 340.5 321 54.2
Lsat_1_v5_gn_2_131440 Lactuca sativa HOM05D002465 ORTHO05D008860 2.0e-90 336.7 317 56.2
SGA_v2.0_scaffold10G05284 Striga asiatica HOM05D002465 ORTHO05D008860 1.3e-89 334.0 325 56.0
HanXRQChr07g0206921 Helianthus annuus HOM05D002465 ORTHO05D008860 2.9e-89 332.8 316 54.4
TAR374G0466 Trochodendron aralioides HOM05D002465 ORTHO05D008860 8.3e-89 331.3 322 54.0
Sc13g0009250 Simmondsia chinensis HOM05D002465 ORTHO05D008860 1.9e-88 330.1 319 54.2
AUR62021108 Chenopodium quinoa HOM05D002465 ORTHO05D008860 2.1e-87 326.6 265 64.2
vmacro06619 Vaccinium macrocarpon HOM05D002465 ORTHO05D008860 1.7e-86 323.6 312 56.4
ECA238G0507 Erigeron canadensis HOM05D002465 ORTHO05D008860 3.9e-86 322.4 323 53.9
Nitab4.5_0016317g0010 Nicotiana tabacum HOM05D002465 ORTHO05D008860 1.2e-84 317.4 228 65.4
Carub.0008s1297 Capsella rubella HOM05D002465 ORTHO05D008860 2.9e-81 306.2 188 81.9
SEGI_38444 Sequoiadendron giganteum HOM05D002465 ORTHO05D008860 4.3e-77 292.4 324 50.6
unitig_26.g10201 Utricularia gibba HOM05D002465 ORTHO05D008860 2.1e-76 290.0 261 55.6
Os10g0533200 Oryza sativa ssp. japonica HOM05D002465 ORTHO05D008860 4.0e-75 285.8 325 49.2
ATR0661G059 Amborella trichopoda HOM05D002465 ORTHO05D008860 2.6e-74 283.1 321 51.1
Eucgr.L01486 Eucalyptus grandis HOM05D002465 ORTHO05D008860 2.6e-74 283.1 319 50.8
Glyma.10G230300 Glycine max HOM05D002465 ORTHO05D008860 5.8e-74 282.0 312 51.9
Zm00001eb021880 Zea mays HOM05D002465 ORTHO05D008860 5.4e-72 275.4 335 47.5
CDE07G0391 Ceratophyllum demersum HOM05D002465 ORTHO05D008860 3.3e-69 266.2 316 45.9
HPP92_015083 Vanilla planifolia HOM05D002465 ORTHO05D008860 1.7e-65 253.8 328 45.7
RcHm_v2.0_Chr1g0378551 Rosa chinensis HOM05D002465 ORTHO05D008860 7.9e-63 245.0 174 70.7
Lj1C1006G4 Lonicera japonica HOM05D002465 ORTHO05D005308 2.1e-60 236.9 216 58.3
Mapoly0033s0116 Marchantia polymorpha HOM05D002465 ORTHO05D008860 1.4e-59 234.2 316 42.7
Actinidia08586 Actinidia chinensis HOM05D002465 ORTHO05D008860 6.7e-54 215.3 201 54.7
HPP92_028539 Vanilla planifolia HOM05D002465 ORTHO05D008860 1.1e-53 214.5 204 55.4
CANSAT01G1695 Cannabis sativa HOM05D002465 ORTHO05D008860 9.3e-48 194.9 160 62.5
AagrBONN_evm.TU.Sc2ySwM_362.356 Anthoceros agrestis HOM05D002465 ORTHO05D008860 3.2e-40 169.9 256 41.0
Aqoxy5G00666 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 2.7e-31 140.2 109 64.2
Aqoxy5G00661 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 7.9e-31 138.7 109 63.3
Pp3s46_180 Physcomitrium patens HOM05D002465 ORTHO05D028651 1.9e-24 117.5 269 29.0
Cfa016297 Carpinus fangiana HOM05D002465 ORTHO05D008860 1.5e-21 107.8 86 64.0
GSVIVG01028828001 Vitis vinifera HOM05D002465 ORTHO05D008860 5.7e-21 105.9 110 55.5
Pp3c1_3280 Physcomitrium patens HOM05D002465 ORTHO05D008860 3.8e-17 93.2 123 45.5
Actinidia34162 Actinidia chinensis HOM05D002465 ORTHO05D008860 2.4e-11 73.9 65 61.5


User provided reference genes

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