Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g13026 Brassica carinata HOM05D000179 ORTHO05D091866 5.2e-35 150.6 81 100.0
BcaC03g13025 Brassica carinata HOM05D000179 ORTHO05D000107 1.0e-22 109.8 62 96.8
C02p00840 Brassica napus HOM05D000179 ORTHO05D000107 1.0e-22 109.8 62 96.8
BolC2t06081H Brassica oleracea HOM05D000179 ORTHO05D000107 1.0e-22 109.8 62 96.8
BcaB05g21849 Brassica carinata HOM05D000179 ORTHO05D000107 3.3e-21 104.8 62 93.5
BcaB01g05855 Brassica carinata HOM05D000179 ORTHO05D000107 1.1e-19 99.8 62 85.5
A10p32780 Brassica napus HOM05D000179 ORTHO05D000107 1.1e-19 99.8 62 88.7
C09p73650 Brassica napus HOM05D000179 ORTHO05D000107 1.1e-19 99.8 62 88.7
BolC9t60095H Brassica oleracea HOM05D000179 ORTHO05D000107 1.1e-19 99.8 62 88.7
BraA10t45312Z Brassica rapa HOM05D000179 ORTHO05D000107 1.1e-19 99.8 62 88.7
C03p01350 Brassica napus HOM05D000179 ORTHO05D000107 5.2e-19 97.4 62 83.9
BolC3t12693H Brassica oleracea HOM05D000179 ORTHO05D000107 5.2e-19 97.4 62 83.9
Thhalv10013267m.g Eutrema salsugineum HOM05D000179 ORTHO05D000107 6.8e-19 97.1 62 87.1
Sp6g39570 Schrenkiella parvula HOM05D000179 ORTHO05D000107 6.8e-19 97.1 62 87.1
CARHR210210 Cardamine hirsuta HOM05D000179 ORTHO05D000107 2.0e-18 95.5 62 74.2
AT5G03150 Arabidopsis thaliana HOM05D000179 ORTHO05D000107 3.4e-18 94.7 62 83.9
Carub.0006s0194 Capsella rubella HOM05D000179 ORTHO05D000107 3.4e-18 94.7 62 83.9
AL6G12430 Arabidopsis lyrata HOM05D000179 ORTHO05D000107 8.3e-17 90.1 62 80.6
A03p01040 Brassica napus HOM05D000179 ORTHO05D000107 1.3e-14 82.8 62 72.6
BraA03t09485Z Brassica rapa HOM05D000179 ORTHO05D000107 1.3e-14 82.8 62 72.6
THA.LOC104816330 Tarenaya hassleriana HOM05D000179 ORTHO05D000107 7.5e-10 67.0 66 69.7


User provided reference genes

Program Settings