Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g12796 Brassica carinata HOM05D001484 ORTHO05D092642 4.2e-89 331.3 157 100.0
BcaB02g08737 Brassica carinata HOM05D001484 ORTHO05D001564 4.5e-11 72.0 71 54.9
A05p00020 Brassica napus HOM05D001484 ORTHO05D001564 4.5e-11 72.0 71 54.9
BraA05t18998Z Brassica rapa HOM05D001484 ORTHO05D001564 4.5e-11 72.0 71 54.9
AT2G48110 Arabidopsis thaliana HOM05D001484 ORTHO05D001564 1.7e-10 70.1 56 60.7
Thhalv10001284m.g Eutrema salsugineum HOM05D001484 ORTHO05D001564 1.7e-10 70.1 56 60.7
Sp4g30030 Schrenkiella parvula HOM05D001484 ORTHO05D001564 1.7e-10 70.1 56 60.7
AL4G47710 Arabidopsis lyrata HOM05D001484 ORTHO05D001564 2.3e-10 69.7 56 58.9
BcaC02g12565 Brassica carinata HOM05D001484 ORTHO05D001564 2.9e-10 69.3 71 53.5
Aa31LG4G3300 Aethionema arabicum HOM05D001484 ORTHO05D001564 8.6e-10 67.8 57 59.6
Carub.0004s3082 Capsella rubella HOM05D001484 ORTHO05D001564 9.5e-09 64.3 57 57.9
C01p40150 Brassica napus HOM05D001484 ORTHO05D018602 2.1e-08 63.2 141 36.9
CARHR143510 Cardamine hirsuta HOM05D001484 ORTHO05D001564 3.6e-08 62.4 57 57.9
CAN.G1170.2 Capsicum annuum HOM05D001484 ORTHO05D001564 1.8e-07 60.1 78 43.6
Nitab4.5_0003162g0020 Nicotiana tabacum HOM05D001484 ORTHO05D001564 4.0e-07 58.9 77 44.2
Nitab4.5_0000732g0140 Nicotiana tabacum HOM05D001484 ORTHO05D001564 5.2e-07 58.5 77 42.9
Peaxi162Scf00095g01015 Petunia axillaris HOM05D001484 ORTHO05D001564 5.2e-07 58.5 78 43.6
THA.LOC104802225 Tarenaya hassleriana HOM05D001484 ORTHO05D001564 6.8e-07 58.2 57 50.9
MD13G1182100 Malus domestica HOM05D001484 ORTHO05D001564 1.5e-06 57.0 88 40.9
Solyc01g080200.3 Solanum lycopersicum HOM05D001484 ORTHO05D001564 1.5e-06 57.0 78 42.3
Sopen01g031980 Solanum pennellii HOM05D001484 ORTHO05D001564 1.5e-06 57.0 78 42.3
PGSC0003DMG400004351 Solanum tuberosum HOM05D001484 ORTHO05D001564 1.5e-06 57.0 78 42.3
Hma1.2p1_1644F.1_g295320 Hydrangea macrophylla HOM05D001484 ORTHO05D001564 2.0e-06 56.6 91 42.9
Manes.03G185600 Manihot esculenta HOM05D001484 ORTHO05D001564 2.0e-06 56.6 77 48.1
TAR365G1023 Trochodendron aralioides HOM05D001484 ORTHO05D001564 2.0e-06 56.6 61 54.1
FAN07G0967 Fragaria x ananassa HOM05D001484 ORTHO05D001564 2.6e-06 56.2 115 36.5
Potri.014G138400 Populus trichocarpa HOM05D001484 ORTHO05D001564 4.4e-06 55.5 92 41.3
CiPaw.08G103100 Carya illinoinensis HOM05D001484 ORTHO05D001564 5.8e-06 55.1 78 48.7
Haze_04747 Corylus avellana HOM05D001484 ORTHO05D001564 5.8e-06 55.1 116 35.3
Nn4g26168 Nelumbo nucifera HOM05D001484 ORTHO05D001564 5.8e-06 55.1 79 43.0
QL12p022706 Quercus lobata HOM05D001484 ORTHO05D001564 5.8e-06 55.1 78 48.7
TAR633G0959 Trochodendron aralioides HOM05D001484 ORTHO05D001564 5.8e-06 55.1 115 37.4
Aqoxy2G03236 Aquilegia oxysepala HOM05D001484 ORTHO05D001564 7.5e-06 54.7 115 35.7
Dinv38383 Davidia involucrata HOM05D001484 ORTHO05D001564 7.5e-06 54.7 77 48.1
FAN15G3626 Fragaria x ananassa HOM05D001484 ORTHO05D001564 7.5e-06 54.7 101 38.6
FAN20G1787 Fragaria x ananassa HOM05D001484 ORTHO05D001564 7.5e-06 54.7 101 38.6
FAN27G1317 Fragaria x ananassa HOM05D001484 ORTHO05D001564 7.5e-06 54.7 101 38.6
Cfa015573 Carpinus fangiana HOM05D001484 ORTHO05D001564 9.8e-06 54.3 100 38.0
Haze_00974 Corylus avellana HOM05D001484 ORTHO05D001564 9.8e-06 54.3 100 38.0
Potri.008G201600 Populus trichocarpa HOM05D001484 ORTHO05D001564 9.8e-06 54.3 62 50.0
Sabra02G0167900 Salix brachista HOM05D001484 ORTHO05D001564 9.8e-06 54.3 92 42.4
Sabra14G0104400 Salix brachista HOM05D001484 ORTHO05D001564 9.8e-06 54.3 78 46.2


User provided reference genes

Program Settings