Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g11244 Brassica carinata HOM05D003893 ORTHO05D094965 7.5e-53 210.3 110 100.0
BcaC08g45749 Brassica carinata HOM05D003893 ORTHO05D021800 3.2e-35 151.8 91 90.1
BcaC05g26842 Brassica carinata HOM05D003893 ORTHO05D021800 1.3e-28 129.8 83 86.7
BolC4t23418H Brassica oleracea HOM05D003893 ORTHO05D021800 2.1e-23 112.5 58 96.6
C06p35280 Brassica napus HOM05D003893 ORTHO05D021800 6.2e-23 110.9 58 94.8
BolC6t38634H Brassica oleracea HOM05D003893 ORTHO05D021800 4.1e-19 98.2 49 100.0
BolC5t31436H Brassica oleracea HOM05D003893 ORTHO05D021800 2.1e-18 95.9 54 87.0
C05p27230 Brassica napus HOM05D003893 ORTHO05D005167 3.5e-18 95.1 49 95.9
BcaNung00076 Brassica carinata HOM05D003893 ORTHO05D005167 1.8e-14 82.8 94 55.3
BcaC09g51627 Brassica carinata HOM05D003893 ORTHO05D005167 7.6e-13 77.4 94 52.1
Sp7g16550 Schrenkiella parvula HOM05D003893 ORTHO05D005167 9.9e-13 77.0 94 52.1
AL7G36990 Arabidopsis lyrata HOM05D003893 ORTHO05D005167 8.4e-12 73.9 91 51.6
A01p09670 Brassica napus HOM05D003893 ORTHO05D005167 1.9e-11 72.8 94 48.9
BraA01t00910Z Brassica rapa HOM05D003893 ORTHO05D005167 1.9e-11 72.8 94 50.0
C01p11280 Brassica napus HOM05D003893 ORTHO05D005167 3.2e-11 72.0 94 50.0
BolC1t01093H Brassica oleracea HOM05D003893 ORTHO05D005167 3.2e-11 72.0 94 50.0
Thhalv10024195m.g Eutrema salsugineum HOM05D003893 ORTHO05D005167 7.1e-11 70.9 91 51.6
AT4G17610 Arabidopsis thaliana HOM05D003893 ORTHO05D005167 3.5e-10 68.6 94 47.9
Carub.0007s2378 Capsella rubella HOM05D003893 ORTHO05D005167 3.5e-10 68.6 94 50.0
CARHR224310 Cardamine hirsuta HOM05D003893 ORTHO05D005167 3.0e-09 65.5 94 45.7
Aa31LG6G350 Aethionema arabicum HOM05D003893 ORTHO05D005167 1.1e-08 63.5 94 46.8


User provided reference genes

Program Settings