Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g10785 Brassica carinata HOM05D005164 ORTHO05D006398 1.0e-216 756.5 398 100.0
C04p25110 Brassica napus HOM05D005164 ORTHO05D006398 1.0e-216 756.5 398 100.0
BolC4t24015H Brassica oleracea HOM05D005164 ORTHO05D006398 1.0e-216 756.5 398 100.0
A06p48120 Brassica napus HOM05D005164 ORTHO05D006398 2.5e-215 751.9 398 99.5
BraA06t27681Z Brassica rapa HOM05D005164 ORTHO05D006398 2.5e-215 751.9 398 99.5
BcaC06g31734 Brassica carinata HOM05D005164 ORTHO05D006398 2.3e-213 745.3 398 98.5
A02p27610 Brassica napus HOM05D005164 ORTHO05D006398 3.0e-208 728.4 398 96.0
BolC2t10406H Brassica oleracea HOM05D005164 ORTHO05D006398 3.0e-208 728.4 398 96.0
BraA02t07794Z Brassica rapa HOM05D005164 ORTHO05D006398 3.0e-208 728.4 398 96.0
Sp2g07720 Schrenkiella parvula HOM05D005164 ORTHO05D006398 9.5e-207 723.4 398 96.0
BcaC03g16546 Brassica carinata HOM05D005164 ORTHO05D006398 4.7e-206 721.1 398 95.5
C02p43640 Brassica napus HOM05D005164 ORTHO05D006398 4.7e-206 721.1 398 95.5
BcaB07g30597 Brassica carinata HOM05D005164 ORTHO05D006398 8.1e-206 720.3 398 95.2
Carub.0008s0578 Capsella rubella HOM05D005164 ORTHO05D006398 8.3e-203 710.3 398 93.2
CARHR181050 Cardamine hirsuta HOM05D005164 ORTHO05D006398 2.1e-201 705.7 398 93.0
AT5G42970 Arabidopsis thaliana HOM05D005164 ORTHO05D006398 1.7e-200 702.6 398 92.2
AL8G17800 Arabidopsis lyrata HOM05D005164 ORTHO05D006398 6.6e-200 700.7 398 92.0
Thhalv10003436m.g Eutrema salsugineum HOM05D005164 ORTHO05D006398 4.3e-199 698.0 398 92.2
THA.LOC104814156 Tarenaya hassleriana HOM05D005164 ORTHO05D006398 6.2e-198 694.1 399 92.0
Aa31LG9G13090 Aethionema arabicum HOM05D005164 ORTHO05D006398 1.8e-197 692.6 398 92.5
THA.LOC104822841 Tarenaya hassleriana HOM05D005164 ORTHO05D006398 2.2e-195 685.6 398 90.2
Ciclev10001386m.g Citrus clementina HOM05D005164 ORTHO05D006398 4.9e-187 657.9 398 86.2
MSTRG.24294 Avicennia marina HOM05D005164 ORTHO05D006398 2.1e-185 652.5 398 85.4
Cfa018135 Carpinus fangiana HOM05D005164 ORTHO05D006398 2.7e-185 652.1 398 84.7
Manes.18G028500 Manihot esculenta HOM05D005164 ORTHO05D006398 7.8e-185 650.6 398 84.9
Sc02g0006310 Simmondsia chinensis HOM05D005164 ORTHO05D006398 2.3e-184 649.0 398 84.7
EL10Ac8g20456 Beta vulgaris HOM05D005164 ORTHO05D006398 3.9e-184 648.3 398 85.2
TAR376G0296 Trochodendron aralioides HOM05D005164 ORTHO05D006398 5.1e-184 647.9 398 84.4
CiPaw.16G055400 Carya illinoinensis HOM05D005164 ORTHO05D006398 1.1e-183 646.7 398 84.4
COL.COLO4_26343 Corchorus olitorius HOM05D005164 ORTHO05D006398 1.1e-183 646.7 398 84.9
CiPaw.15G075600 Carya illinoinensis HOM05D005164 ORTHO05D006398 1.5e-183 646.4 398 84.7
Gohir.A03G078200 Gossypium hirsutum HOM05D005164 ORTHO05D006398 1.5e-183 646.4 398 84.7
Thecc.08G024200 Theobroma cacao HOM05D005164 ORTHO05D006398 1.5e-183 646.4 398 84.9
Gohir.A05G260000 Gossypium hirsutum HOM05D005164 ORTHO05D006398 4.3e-183 644.8 398 84.4
Gohir.D02G094300 Gossypium hirsutum HOM05D005164 ORTHO05D006398 4.3e-183 644.8 398 84.4
Gorai.005G107200 Gossypium raimondii HOM05D005164 ORTHO05D006398 4.3e-183 644.8 398 84.4
QL02p007897 Quercus lobata HOM05D005164 ORTHO05D006398 4.3e-183 644.8 397 83.9
Ca_25003_v3 Cicer arietinum L. HOM05D005164 ORTHO05D006398 5.6e-183 644.4 398 83.9
Lj3g0003260 Lotus japonicus HOM05D005164 ORTHO05D006398 7.3e-183 644.0 398 83.9
TWI56G0324 Tripterygium wilfordii HOM05D005164 ORTHO05D006398 7.3e-183 644.0 398 84.4
Lj4C784T1 Lonicera japonica HOM05D005164 ORTHO05D006398 1.3e-182 643.3 398 83.9
Potri.002G263200 Populus trichocarpa HOM05D005164 ORTHO05D006398 1.3e-182 643.3 398 83.9
Nn5g29540 Nelumbo nucifera HOM05D005164 ORTHO05D006398 1.6e-182 642.9 398 84.4
RcHm_v2.0_Chr6g0300751 Rosa chinensis HOM05D005164 ORTHO05D006398 1.6e-182 642.9 398 83.7
GSVIVG01009684001 Vitis vinifera HOM05D005164 ORTHO05D006398 1.6e-182 642.9 398 84.4
SalBow8G2733 Salvia bowleyana HOM05D005164 ORTHO05D006398 2.8e-182 642.1 398 83.4
AUR62014895 Chenopodium quinoa HOM05D005164 ORTHO05D006398 3.6e-182 641.7 398 84.4
Eucgr.F01909 Eucalyptus grandis HOM05D005164 ORTHO05D006398 3.6e-182 641.7 398 84.4
Dinv36062 Davidia involucrata HOM05D005164 ORTHO05D006398 4.8e-182 641.3 398 83.9
Glyma.09G231100 Glycine max HOM05D005164 ORTHO05D006398 8.1e-182 640.6 398 83.4
CANSAT64G0480 Cannabis sativa HOM05D005164 ORTHO05D006398 1.4e-181 639.8 398 83.2
Duzib041G0411 Durio zibethinus HOM05D005164 ORTHO05D006398 1.4e-181 639.8 398 83.9
Potri.014G180800 Populus trichocarpa HOM05D005164 ORTHO05D006398 1.8e-181 639.4 398 83.9
Solyc04g080160.3 Solanum lycopersicum HOM05D005164 ORTHO05D006398 2.4e-181 639.0 398 83.2
Sopen04g033750 Solanum pennellii HOM05D005164 ORTHO05D006398 2.4e-181 639.0 398 83.2
MELO3C003848.2 Cucumis melo HOM05D005164 ORTHO05D006398 4.0e-181 638.3 398 83.7
CsaV3_3G045000 Cucumis sativus L. HOM05D005164 ORTHO05D006398 4.0e-181 638.3 398 83.7
Psat3g167280 Pisum sativum HOM05D005164 ORTHO05D006398 4.0e-181 638.3 398 83.2
Gohir.D05G261900 Gossypium hirsutum HOM05D005164 ORTHO05D006398 5.3e-181 637.9 398 83.7
Glyma.12G005400 Glycine max HOM05D005164 ORTHO05D006398 6.9e-181 637.5 398 83.2
HanXRQChr02g0040181 Helianthus annuus HOM05D005164 ORTHO05D006398 6.9e-181 637.5 398 83.2
Lsat_1_v5_gn_1_17561 Lactuca sativa HOM05D005164 ORTHO05D006398 6.9e-181 637.5 398 83.9
PGSC0003DMG400005163 Solanum tuberosum HOM05D005164 ORTHO05D006398 6.9e-181 637.5 398 82.9
ATR0733G076 Amborella trichopoda HOM05D005164 ORTHO05D006398 9.0e-181 637.1 398 83.2
Medtr0173s0030 Medicago truncatula HOM05D005164 ORTHO05D006398 1.2e-180 636.7 398 82.9
Peaxi162Scf00690g00117 Petunia axillaris HOM05D005164 ORTHO05D006398 2.6e-180 635.6 398 83.4
Phvul.011G006200 Phaseolus vulgaris HOM05D005164 ORTHO05D006398 2.6e-180 635.6 398 82.9
VMungo1127G0366 Vigna mungo HOM05D005164 ORTHO05D006398 3.4e-180 635.2 398 82.9
Cc10_g03080 Coffea canephora HOM05D005164 ORTHO05D006398 4.5e-180 634.8 398 83.2
ECA247G1488 Erigeron canadensis HOM05D005164 ORTHO05D006398 5.8e-180 634.4 398 83.4
Gorai.009G273800 Gossypium raimondii HOM05D005164 ORTHO05D006398 5.8e-180 634.4 401 83.3
Os03g0197400 Oryza sativa ssp. japonica HOM05D005164 ORTHO05D006398 5.8e-180 634.4 400 82.5
CANSAT25G0119 Cannabis sativa HOM05D005164 ORTHO05D006398 1.3e-179 633.3 403 81.6
Sed0001534 Sechium edule HOM05D005164 ORTHO05D006398 1.7e-179 632.9 399 83.2
Hund21200 Selenicereus undatus HOM05D005164 ORTHO05D006398 2.2e-179 632.5 398 83.7
FvH4_2g40000 Fragaria vesca HOM05D005164 ORTHO05D006398 4.9e-179 631.3 399 82.7
FAN27G0257 Fragaria x ananassa HOM05D005164 ORTHO05D006398 4.9e-179 631.3 399 82.7
DCAR_019523 Daucus carota HOM05D005164 ORTHO05D006398 1.4e-178 629.8 398 82.2
FAN15G2586 Fragaria x ananassa HOM05D005164 ORTHO05D006398 1.4e-178 629.8 399 82.5
Sed0021376 Sechium edule HOM05D005164 ORTHO05D006398 1.4e-178 629.8 398 82.4
PGR031G3751 Punica granatum HOM05D005164 ORTHO05D006398 1.6e-177 626.3 398 82.7
FAN20G1227 Fragaria x ananassa HOM05D005164 ORTHO05D006398 2.7e-177 625.5 399 82.2
Gorai.002G128900 Gossypium raimondii HOM05D005164 ORTHO05D006398 3.5e-177 625.2 398 81.2
CAN.G1126.40 Capsicum annuum HOM05D005164 ORTHO05D006398 4.6e-177 624.8 398 81.2
Migut.N00498 Erythranthe guttata HOM05D005164 ORTHO05D006398 1.3e-176 623.2 398 81.7
Gohir.D01G104900 Gossypium hirsutum HOM05D005164 ORTHO05D006398 1.8e-176 622.9 398 81.2
Aqoxy6G01049 Aquilegia oxysepala HOM05D005164 ORTHO05D006398 2.3e-176 622.5 398 81.2
CDE02G4403 Ceratophyllum demersum HOM05D005164 ORTHO05D006398 3.0e-176 622.1 398 81.2
Gohir.A01G116500 Gossypium hirsutum HOM05D005164 ORTHO05D006398 6.7e-176 620.9 398 81.2
MD08G1033300 Malus domestica HOM05D005164 ORTHO05D006398 1.9e-175 619.4 398 80.9
Zm00001eb008060 Zea mays HOM05D005164 ORTHO05D006398 4.3e-175 618.2 440 75.0
MD15G1029900 Malus domestica HOM05D005164 ORTHO05D006398 9.0e-173 610.5 406 78.8
AUR62031100 Chenopodium quinoa HOM05D005164 ORTHO05D006398 2.6e-172 609.0 398 81.4
Oeu009868.2 Olea europaea HOM05D005164 ORTHO05D006398 5.8e-172 607.8 477 70.2
CDE01G0241 Ceratophyllum demersum HOM05D005164 ORTHO05D006398 1.7e-171 606.3 402 79.1
Haze_17990 Corylus avellana HOM05D005164 ORTHO05D006398 3.8e-171 605.1 501 67.5
unitig_22.g6774 Utricularia gibba HOM05D005164 ORTHO05D006398 2.5e-170 602.4 389 81.2
ClCG05G019140 Citrullus lanatus HOM05D005164 ORTHO05D006398 5.5e-170 601.3 398 80.4
Nitab4.5_0000110g0500 Nicotiana tabacum HOM05D005164 ORTHO05D006398 2.1e-169 599.4 398 79.6
Hma1.2p1_0023F.1_g014900 Hydrangea macrophylla HOM05D005164 ORTHO05D006398 2.7e-169 599.0 490 68.4
PSO541G6137 Papaver somniferum HOM05D005164 ORTHO05D006398 6.0e-169 597.8 398 78.9
PSO675G3600 Papaver somniferum HOM05D005164 ORTHO05D006398 1.3e-168 596.7 398 78.6
Nitab4.5_0010187g0010 Nicotiana tabacum HOM05D005164 ORTHO05D006398 2.5e-167 592.4 398 79.4
Prupe.1G381600 Prunus persica HOM05D005164 ORTHO05D006398 2.5e-167 592.4 398 79.1
SGA_v2.0_scaffold326G48708 Striga asiatica HOM05D005164 ORTHO05D006398 3.1e-165 585.5 355 84.5
Mapoly0072s0034 Marchantia polymorpha HOM05D005164 ORTHO05D006398 4.0e-165 585.1 398 73.4
Hma1.2p1_0469F.1_g159190 Hydrangea macrophylla HOM05D005164 ORTHO05D006398 3.8e-163 578.6 439 72.9
Sabra14G0141000 Salix brachista HOM05D005164 ORTHO05D006398 1.1e-162 577.0 437 73.0
Rhsim06G0035000 Rhododendron simsii HOM05D005164 ORTHO05D006398 4.2e-162 575.1 418 74.6
Atru.chr13.515 Acer truncatum HOM05D005164 ORTHO05D006398 9.3e-162 573.9 353 85.0
Pp3c5_28450 Physcomitrium patens HOM05D005164 ORTHO05D006398 6.1e-161 571.2 398 72.1
MBI17_g39721_MAGBIO Magnolia biondii HOM05D005164 ORTHO05D006398 1.3e-160 570.1 431 73.3
SMO364G0673 Selaginella moellendorffii HOM05D005164 ORTHO05D006398 1.8e-160 569.7 398 71.6
Actinidia22558 Actinidia chinensis HOM05D005164 ORTHO05D006398 8.7e-160 567.4 377 79.8
AagrBONN_evm.TU.Sc2ySwM_117.2514 Anthoceros agrestis HOM05D005164 ORTHO05D006398 3.3e-159 565.5 397 71.0
Manes.05G161900 Manihot esculenta HOM05D005164 ORTHO05D006398 6.9e-157 557.8 353 82.4
TPR.G3648 Trifolium pratense HOM05D005164 ORTHO05D006398 5.5e-154 548.1 387 76.2
CBR_g36268 Chara braunii HOM05D005164 ORTHO05D006398 5.5e-146 521.5 394 66.8
vmacro21627 Vaccinium macrocarpon HOM05D005164 ORTHO05D006398 6.3e-142 508.1 398 69.8
Duzib093G0265 Durio zibethinus HOM05D005164 ORTHO05D006398 5.2e-136 488.4 398 67.6
HPP92_024905 Vanilla planifolia HOM05D005164 ORTHO05D006398 3.2e-130 469.2 347 71.2
Actinidia15313 Actinidia chinensis HOM05D005164 ORTHO05D006398 6.8e-128 461.5 419 62.3
CSS0020238 Camellia sinensis var. sinensis HOM05D005164 ORTHO05D006398 1.0e-123 447.6 271 84.5
CAN.G416.53 Capsicum annuum HOM05D005164 ORTHO05D006398 5.4e-117 425.2 312 72.8
Cre11.g478240 Chlamydomonas reinhardtii HOM05D005164 ORTHO05D006398 2.6e-111 406.4 394 53.8
RcHm_v2.0_Chr2g0166611 Rosa chinensis HOM05D005164 ORTHO05D006398 6.8e-104 381.7 229 85.6
MCO16G668 Micromonas commoda HOM05D005164 ORTHO05D006398 1.2e-103 380.9 402 50.7
Cpa.g.sc64.68 Carica papaya HOM05D005164 ORTHO05D006398 2.1e-92 343.6 216 82.4
PRCOL_00006114 Prasinoderma coloniale HOM05D005164 ORTHO05D006398 6.6e-91 338.6 404 48.0
SEGI_27147 Sequoiadendron giganteum HOM05D005164 ORTHO05D006398 2.6e-79 300.1 212 72.2
Sopen04g033730 Solanum pennellii HOM05D005164 ORTHO05D006398 3.9e-75 286.2 214 71.0
GSVIVG01023193001 Vitis vinifera HOM05D005164 ORTHO05D006398 2.4e-61 240.4 150 82.0
GSVIVG01003780001 Vitis vinifera HOM05D005164 ORTHO05D006398 7.9e-60 235.3 150 80.0
Cfa024373 Carpinus fangiana HOM05D005164 ORTHO05D006398 1.1e-58 231.5 371 38.0
Carub.0004s0266 Capsella rubella HOM05D005164 ORTHO05D006398 8.1e-57 225.3 146 84.2
MBI17_g35116_MAGBIO Magnolia biondii HOM05D005164 ORTHO05D006398 1.1e-50 204.9 183 65.6
Haze_26904 Corylus avellana HOM05D005164 ORTHO05D006398 2.6e-39 167.2 205 44.4
arahy.Tifrunner.gnm1.ann1.ABX6XB Arachis hypogaea HOM05D005164 ORTHO05D006398 1.7e-33 147.9 243 44.0
arahy.Tifrunner.gnm1.ann1.D3INNH Arachis hypogaea HOM05D005164 ORTHO05D006398 1.5e-31 141.4 94 79.8
arahy.Tifrunner.gnm1.ann1.R33BY8 Arachis hypogaea HOM05D005164 ORTHO05D006398 1.5e-31 141.4 94 79.8
TPR.G136 Trifolium pratense HOM05D005164 ORTHO05D006398 2.5e-13 80.9 49 73.5
arahy.Tifrunner.gnm1.ann1.ZV61IE Arachis hypogaea HOM05D005164 ORTHO05D006398 1.8e-11 74.7 93 51.6
arahy.Tifrunner.gnm1.ann1.2K5AT5 Arachis hypogaea HOM05D005164 ORTHO05D006398 9.1e-08 62.4 49 65.3
ECA240G1489 Erigeron canadensis HOM05D001185 ORTHO05D003777 4.5e-07 60.1 330 23.6
CsaV3_2G017820 Cucumis sativus L. HOM05D001185 ORTHO05D003777 1.7e-06 58.2 351 21.7


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