Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g08100 Brassica carinata HOM05D001038 ORTHO05D018589 5.6e-167 590.9 302 100.0
BcaC08g44172 Brassica carinata HOM05D001038 ORTHO05D018589 7.7e-116 421.0 301 76.4
BolC4t26248H Brassica oleracea HOM05D001038 ORTHO05D018589 1.3e-115 420.2 299 76.6
A05p23600 Brassica napus HOM05D001038 ORTHO05D018589 1.8e-104 383.3 305 67.9
BraA05t21228Z Brassica rapa HOM05D001038 ORTHO05D018589 1.8e-104 383.3 305 67.9
BcaB04g17690 Brassica carinata HOM05D001038 ORTHO05D018589 3.4e-87 325.9 287 60.6
BcaB03g16464 Brassica carinata HOM05D001038 ORTHO05D018589 4.4e-87 325.5 300 62.3
BcaB02g10756 Brassica carinata HOM05D000367 ORTHO05D001227 6.6e-59 231.9 234 58.5
BcaB06g26737 Brassica carinata HOM05D001038 ORTHO05D010763 5.6e-58 228.8 217 58.5
BcaB05g22891 Brassica carinata HOM05D001038 ORTHO05D010763 4.0e-56 222.6 279 47.0
BcaB07g33328 Brassica carinata HOM05D001038 ORTHO05D010763 2.2e-54 216.9 279 45.5
BcaB02g06555 Brassica carinata HOM05D001038 ORTHO05D010763 1.7e-51 207.2 270 47.8
BcaB06g25472 Brassica carinata HOM05D001038 ORTHO05D010763 5.6e-50 202.2 331 40.5
BcaNung01360 Brassica carinata HOM05D001038 ORTHO05D010763 1.9e-45 187.2 250 44.8
BcaB01g01601 Brassica carinata HOM05D001038 ORTHO05D090378 5.8e-39 165.6 296 37.5
C04p58370 Brassica napus HOM05D001038 ORTHO05D018589 7.6e-39 165.2 134 70.1
BcaB04g17339 Brassica carinata HOM05D001038 ORTHO05D090516 1.4e-32 144.4 319 34.8
BcaB01g01825 Brassica carinata HOM05D001038 ORTHO05D000395 1.5e-23 114.4 145 44.1
BcaC07g39263 Brassica carinata HOM05D001038 ORTHO05D016776 1.9e-21 107.5 150 43.3
BcaB05g22095 Brassica carinata HOM05D001038 ORTHO05D016776 9.3e-21 105.1 191 35.1
BcaC08g46850 Brassica carinata HOM05D001038 ORTHO05D000395 6.0e-20 102.4 131 45.0
BolC4t25613H Brassica oleracea HOM05D001038 ORTHO05D016776 1.0e-19 101.7 212 33.5
BraSC37t46126Z Brassica rapa HOM05D001038 ORTHO05D016776 1.0e-19 101.7 393 28.0
BraA10t43039Z Brassica rapa HOM05D001038 ORTHO05D000395 1.1e-18 98.2 189 39.2
BolC4t27749H Brassica oleracea HOM05D001038 ORTHO05D016776 1.5e-18 97.8 391 27.4
A04p22180 Brassica napus HOM05D001038 ORTHO05D000395 3.3e-18 96.7 189 38.6
A10p08770 Brassica napus HOM05D001038 ORTHO05D016776 4.3e-18 96.3 227 32.6
C08p22730 Brassica napus HOM05D001038 ORTHO05D016776 7.4e-18 95.5 227 32.6
C04p40350 Brassica napus HOM05D001038 ORTHO05D016776 1.6e-17 94.4 231 31.6
BcaC04g21625 Brassica carinata HOM05D001038 ORTHO05D016703 2.8e-17 93.6 149 37.6
BcaC01g03622 Brassica carinata HOM05D001038 ORTHO05D016776 3.7e-17 93.2 292 30.1
BcaC05g28787 Brassica carinata HOM05D001038 ORTHO05D016716 9.0e-16 88.6 142 40.1
C04p40300 Brassica napus HOM05D003139 ORTHO05D003540 9.0e-16 88.6 319 28.2
BcaC08g44444 Brassica carinata HOM05D001038 ORTHO05D016716 1.5e-15 87.8 142 38.7
BolC9t55839H Brassica oleracea HOM05D001038 ORTHO05D016703 1.5e-15 87.8 142 38.0
BcaB07g32567 Brassica carinata HOM05D001038 ORTHO05D010763 3.4e-15 86.7 140 38.6
C07p34820 Brassica napus HOM05D001038 ORTHO05D000395 5.9e-15 85.9 245 29.8
A03p31860 Brassica napus HOM05D001038 ORTHO05D024045 3.8e-14 83.2 238 30.7
A03p51100 Brassica napus HOM05D001038 ORTHO05D024045 3.8e-14 83.2 238 30.7
C07p11760 Brassica napus HOM05D001038 ORTHO05D024045 5.0e-14 82.8 201 32.3
BcaB01g04196 Brassica carinata HOM05D001038 ORTHO05D000395 6.5e-14 82.4 357 26.6
BcaB08g36820 Brassica carinata HOM05D001038 ORTHO05D016703 6.5e-14 82.4 146 35.6
C09p60390 Brassica napus HOM05D001038 ORTHO05D016703 1.4e-13 81.3 142 35.9
BcaB07g32737 Brassica carinata HOM05D001038 ORTHO05D000395 3.2e-13 80.1 126 38.9
BcaC08g46990 Brassica carinata HOM05D025413 ORTHO05D021599 2.7e-12 77.0 110 40.9
BcaC08g44142 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-11 74.7 105 41.0
BcaB08g35144 Brassica carinata HOM05D001038 ORTHO05D021599 5.1e-11 72.8 106 42.5
BcaC05g24336 Brassica carinata HOM05D001038 ORTHO05D016776 6.7e-11 72.4 59 59.3
C06p18900 Brassica napus HOM05D001038 ORTHO05D016716 6.7e-11 72.4 113 39.8
BraA06t24545Z Brassica rapa HOM05D001038 ORTHO05D024045 8.7e-11 72.0 285 27.7
C07p13440 Brassica napus HOM05D001038 ORTHO05D016703 1.1e-10 71.6 125 36.0
BolC7t41839H Brassica oleracea HOM05D001038 ORTHO05D016703 1.1e-10 71.6 125 36.0
BcaB01g01349 Brassica carinata HOM05D001038 ORTHO05D096136 1.5e-10 71.2 104 38.5
BcaB05g23462 Brassica carinata HOM05D001038 ORTHO05D091267 3.3e-10 70.1 58 56.9
BcaC06g35568 Brassica carinata HOM05D001038 ORTHO05D016703 7.4e-10 68.9 106 37.7
BolC9t58942H Brassica oleracea HOM05D001038 ORTHO05D010763 7.4e-10 68.9 164 33.5
C07p11920 Brassica napus HOM05D001038 ORTHO05D031981 9.7e-10 68.6 85 41.2
BraA10t43660Z Brassica rapa HOM05D025413 ORTHO05D021599 3.7e-09 66.6 189 33.9
BcaB07g33632 Brassica carinata HOM05D001038 ORTHO05D016703 4.8e-09 66.2 254 28.3
BcaC02g09232 Brassica carinata HOM05D003139 ORTHO05D003540 1.8e-08 64.3 291 27.8
BcaC03g15830 Brassica carinata HOM05D001038 ORTHO05D016716 2.4e-08 63.9 97 39.2
BolC7t41164H Brassica oleracea HOM05D001038 ORTHO05D000395 9.0e-08 62.0 286 27.3
BraA09t41072Z Brassica rapa HOM05D001038 ORTHO05D000395 9.0e-08 62.0 91 36.3
BcaC06g35713 Brassica carinata HOM05D001038 ORTHO05D024045 1.2e-07 61.6 216 29.6
BraA02t06821Z Brassica rapa HOM05D001038 ORTHO05D000395 2.0e-07 60.8 97 37.1
BolC7t40492H Brassica oleracea HOM05D001038 ORTHO05D010763 2.6e-07 60.5 92 38.0
BcaB05g25087 Brassica carinata HOM05D001038 ORTHO05D000395 5.9e-07 59.3 131 29.0
BcaNung00468 Brassica carinata HOM05D001038 ORTHO05D000395 7.7e-07 58.9 124 29.8
BcaB04g17766 Brassica carinata HOM05D001038 ORTHO05D000395 1.0e-06 58.5 142 29.6
BolC5t32403H Brassica oleracea HOM05D001038 ORTHO05D016716 1.7e-06 57.8 91 37.4
BraA05t19810Z Brassica rapa HOM05D001038 ORTHO05D016703 2.2e-06 57.4 130 33.1
BraA08t34217Z Brassica rapa HOM05D001038 ORTHO05D016716 2.2e-06 57.4 69 42.0
C05p48930 Brassica napus HOM05D001038 ORTHO05D016716 6.5e-06 55.8 129 31.8
BolC5t33633H Brassica oleracea HOM05D001038 ORTHO05D016716 6.5e-06 55.8 129 31.8


User provided reference genes

Program Settings