Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g08078 Brassica carinata HOM05D003953 ORTHO05D004618 4.3e-39 164.5 101 100.0
C04p58680 Brassica napus HOM05D003953 ORTHO05D004618 4.5e-36 154.5 101 96.0
A04p22530 Brassica napus HOM05D003953 ORTHO05D004618 7.7e-28 127.1 88 76.1
BraA04t17798Z Brassica rapa HOM05D003953 ORTHO05D004618 7.7e-28 127.1 88 76.1
A05p15860 Brassica napus HOM05D003953 ORTHO05D004618 1.7e-27 125.9 89 86.5
Sp4g12270 Schrenkiella parvula HOM05D003953 ORTHO05D004618 1.7e-27 125.9 88 73.9
BcaB02g10260 Brassica carinata HOM05D003953 ORTHO05D004618 6.5e-27 124.0 89 86.5
C04p21300 Brassica napus HOM05D003953 ORTHO05D004618 6.5e-27 124.0 89 86.5
BolC4t23659H Brassica oleracea HOM05D003953 ORTHO05D004618 1.4e-26 122.9 89 85.4
AT2G29540 Arabidopsis thaliana HOM05D003953 ORTHO05D004618 2.0e-23 112.5 88 65.9
Thhalv10017434m.g Eutrema salsugineum HOM05D003953 ORTHO05D004618 2.8e-22 108.6 88 62.5
AL4G24250 Arabidopsis lyrata HOM05D003953 ORTHO05D004618 1.4e-21 106.3 88 63.6
Carub.0004s1059 Capsella rubella HOM05D003953 ORTHO05D004618 1.2e-20 103.2 91 59.3
Aa31LG5G6920 Aethionema arabicum HOM05D003953 ORTHO05D004618 1.5e-20 102.8 54 87.0
CARHR122880 Cardamine hirsuta HOM05D003953 ORTHO05D004618 5.9e-20 100.9 88 59.1
Glyma.18G281100 Glycine max HOM05D003953 ORTHO05D004618 9.4e-18 93.6 69 65.2
VMungo1383G2014 Vigna mungo HOM05D004418 ORTHO05D005222 9.4e-18 93.6 55 78.2
THA.LOC104800713 Tarenaya hassleriana HOM05D003953 ORTHO05D004618 1.2e-17 93.2 53 79.2
arahy.Tifrunner.gnm1.ann1.4A8T0Q Arachis hypogaea HOM05D003953 ORTHO05D004618 3.6e-17 91.7 70 61.4
arahy.Tifrunner.gnm1.ann1.DA7VUD Arachis hypogaea HOM05D003953 ORTHO05D004618 3.6e-17 91.7 70 61.4
arahy.Tifrunner.gnm1.ann1.DBQJ9M Arachis hypogaea HOM05D003953 ORTHO05D004618 3.6e-17 91.7 70 61.4
arahy.Tifrunner.gnm1.ann1.X5K85D Arachis hypogaea HOM05D003953 ORTHO05D004618 3.6e-17 91.7 70 61.4
Phvul.008G020000 Phaseolus vulgaris HOM05D003953 ORTHO05D004618 3.6e-17 91.7 67 64.2
Gorai.003G126400 Gossypium raimondii HOM05D003953 ORTHO05D004618 4.7e-17 91.3 56 76.8
Gohir.D03G119900 Gossypium hirsutum HOM05D003953 ORTHO05D004618 6.1e-17 90.9 56 75.0
Thecc.09G309300 Theobroma cacao HOM05D003953 ORTHO05D004618 6.1e-17 90.9 56 76.8
Duzib150G0459 Durio zibethinus HOM05D003953 ORTHO05D004618 7.9e-17 90.5 56 75.0
Gohir.A03G047300 Gossypium hirsutum HOM05D003953 ORTHO05D004618 1.0e-16 90.1 56 75.0
arahy.Tifrunner.gnm1.ann1.6EI814 Arachis hypogaea HOM05D003953 ORTHO05D004618 1.4e-16 89.7 70 60.0
Duzib168G1059 Durio zibethinus HOM05D003953 ORTHO05D004618 1.8e-16 89.4 56 75.0
Gorai.004G180400 Gossypium raimondii HOM05D003953 ORTHO05D004618 1.8e-16 89.4 56 75.0
Gorai.006G047400 Gossypium raimondii HOM05D003953 ORTHO05D004618 1.8e-16 89.4 56 75.0
Gorai.008G072300 Gossypium raimondii HOM05D003953 ORTHO05D004618 1.8e-16 89.4 56 75.0
Atru.chr3.4044 Acer truncatum HOM05D003953 ORTHO05D004618 2.3e-16 89.0 67 64.2
Gohir.D04G155200 Gossypium hirsutum HOM05D003953 ORTHO05D004618 5.1e-16 87.8 56 73.2
Gohir.D07G180600 Gossypium hirsutum HOM05D003953 ORTHO05D004618 5.1e-16 87.8 56 73.2
Dinv06204 Davidia involucrata HOM05D003953 ORTHO05D004618 6.7e-16 87.4 56 71.4
Gorai.011G189400 Gossypium raimondii HOM05D003953 ORTHO05D004618 6.7e-16 87.4 56 73.2
Ciclev10029631m.g Citrus clementina HOM05D003953 ORTHO05D004618 1.1e-15 86.7 55 72.7
Glyma.19G045500 Glycine max HOM05D003953 ORTHO05D004618 1.1e-15 86.7 55 70.9
Gohir.A06G083400 Gossypium hirsutum HOM05D003953 ORTHO05D004618 1.1e-15 86.7 53 75.5
Gohir.D05G283601 Gossypium hirsutum HOM05D003953 ORTHO05D004618 1.1e-15 86.7 56 73.2
Gohir.D05G283900 Gossypium hirsutum HOM05D003953 ORTHO05D004618 1.1e-15 86.7 56 73.2
Gohir.D07G180800 Gossypium hirsutum HOM05D003953 ORTHO05D004618 1.1e-15 86.7 56 73.2
Gohir.D11G224100 Gossypium hirsutum HOM05D003953 ORTHO05D004618 1.1e-15 86.7 53 75.5
Lalb_Chr21g0317911 Lupinus albus HOM05D003953 ORTHO05D004618 1.1e-15 86.7 52 78.8
TWI75G1138 Tripterygium wilfordii HOM05D003953 ORTHO05D004618 1.1e-15 86.7 67 59.7
TWI79G0904 Tripterygium wilfordii HOM05D003953 ORTHO05D004618 1.5e-15 86.3 67 59.7
MSTRG.7467 Avicennia marina HOM05D003953 ORTHO05D004618 2.0e-15 85.9 54 72.2
Gohir.A08G112100 Gossypium hirsutum HOM05D003953 ORTHO05D004618 2.0e-15 85.9 56 71.4
Hma1.2p1_0274F.1_g110300 Hydrangea macrophylla HOM05D003953 ORTHO05D004618 2.0e-15 85.9 55 70.9
SalBow1G5086 Salvia bowleyana HOM05D003953 ORTHO05D004618 2.0e-15 85.9 55 70.9
SalBow8G2167 Salvia bowleyana HOM05D003953 ORTHO05D004618 2.0e-15 85.9 55 70.9
SalBow8G3221 Salvia bowleyana HOM05D003953 ORTHO05D004618 2.0e-15 85.9 55 70.9
Gohir.D09G041350 Gossypium hirsutum HOM05D003953 ORTHO05D004618 2.6e-15 85.5 56 73.2
Gorai.009G298400 Gossypium raimondii HOM05D003953 ORTHO05D004618 2.6e-15 85.5 52 76.9
CiPaw.13G084200 Carya illinoinensis HOM05D003953 ORTHO05D004618 3.3e-15 85.1 65 61.5
Migut.M00943 Erythranthe guttata HOM05D003953 ORTHO05D004618 3.3e-15 85.1 56 67.9
PGR102G1512 Punica granatum HOM05D003953 ORTHO05D004618 3.3e-15 85.1 53 75.5
vmacro03011 Vaccinium macrocarpon HOM05D003953 ORTHO05D004618 3.3e-15 85.1 55 69.1
GSVIVG01024830001 Vitis vinifera HOM05D003953 ORTHO05D004618 3.3e-15 85.1 64 64.1
Lj6g0017568 Lotus japonicus HOM05D003953 ORTHO05D004618 4.4e-15 84.7 55 67.3
Medtr7g020830 Medicago truncatula HOM05D003953 ORTHO05D004618 5.7e-15 84.3 56 69.6
TPR.G3298 Trifolium pratense HOM05D003953 ORTHO05D004618 5.7e-15 84.3 52 75.0
Manes.01G166500 Manihot esculenta HOM05D003953 ORTHO05D004618 7.4e-15 84.0 53 71.7
Nitab4.5_0002405g0070 Nicotiana tabacum HOM05D003953 ORTHO05D004618 7.4e-15 84.0 55 67.3
Psat3g190320 Pisum sativum HOM05D003953 ORTHO05D004618 7.4e-15 84.0 56 67.9
CSS0034778 Camellia sinensis var. sinensis HOM05D003953 ORTHO05D004618 9.7e-15 83.6 56 67.9
Cc09_g02060 Coffea canephora HOM05D003953 ORTHO05D004618 9.7e-15 83.6 55 69.1
DCAR_015642 Daucus carota HOM05D003953 ORTHO05D004618 9.7e-15 83.6 55 67.3
HanXRQChr09g0262301 Helianthus annuus HOM05D003953 ORTHO05D004618 9.7e-15 83.6 52 69.2
Lj1g0022776 Lotus japonicus HOM05D003953 ORTHO05D004618 9.7e-15 83.6 55 65.5
Sabra16G0149700 Salix brachista HOM05D003953 ORTHO05D004618 9.7e-15 83.6 52 73.1
unitig_92.g28151 Utricularia gibba HOM05D003953 ORTHO05D004618 9.7e-15 83.6 64 60.9
Gohir.D09G041300 Gossypium hirsutum HOM05D003953 ORTHO05D004618 1.3e-14 83.2 56 71.4
Nitab4.5_0000880g0090 Nicotiana tabacum HOM05D003953 ORTHO05D004618 1.3e-14 83.2 55 67.3
TPR.G4479 Trifolium pratense HOM05D003953 ORTHO05D004618 1.3e-14 83.2 52 73.1
Gohir.A06G113000 Gossypium hirsutum HOM05D003953 ORTHO05D004618 1.7e-14 82.8 52 75.0
Gohir.A06G119302 Gossypium hirsutum HOM05D003953 ORTHO05D004618 1.7e-14 82.8 52 75.0
Gohir.A12G147900 Gossypium hirsutum HOM05D003953 ORTHO05D004618 1.7e-14 82.8 52 75.0
Gohir.D04G005500 Gossypium hirsutum HOM05D003953 ORTHO05D004618 1.7e-14 82.8 52 75.0
Gohir.D07G184100 Gossypium hirsutum HOM05D003953 ORTHO05D004618 1.7e-14 82.8 52 75.0
Lsat_1_v5_gn_5_168181 Lactuca sativa HOM05D003953 ORTHO05D004618 1.7e-14 82.8 55 63.6
Cfa020872 Carpinus fangiana HOM05D003953 ORTHO05D004618 2.2e-14 82.4 64 59.4
Oeu042438.1 Olea europaea HOM05D003953 ORTHO05D004618 2.2e-14 82.4 56 66.1
Potri.001G246600 Populus trichocarpa HOM05D003953 ORTHO05D004618 2.2e-14 82.4 52 71.2
Cfa011625 Carpinus fangiana HOM05D003953 ORTHO05D004618 2.8e-14 82.0 64 59.4
COL.COLO4_19069 Corchorus olitorius HOM05D003953 ORTHO05D004618 2.8e-14 82.0 56 66.1
CsaV3_1G035860 Cucumis sativus L. HOM05D003953 ORTHO05D004618 2.8e-14 82.0 51 72.5
ECA248G2580 Erigeron canadensis HOM05D003953 ORTHO05D004618 2.8e-14 82.0 52 69.2
SGA_v2.0_scaffold44G16545 Striga asiatica HOM05D003953 ORTHO05D004618 2.8e-14 82.0 55 69.1
HPP92_011695 Vanilla planifolia HOM05D003953 ORTHO05D004618 2.8e-14 82.0 55 67.3
CDE05G3507 Ceratophyllum demersum HOM05D003953 ORTHO05D004618 3.7e-14 81.6 67 58.2
ClCG03G001080 Citrullus lanatus HOM05D003953 ORTHO05D004618 3.7e-14 81.6 52 71.2
ClCG03G002440 Citrullus lanatus HOM05D003953 ORTHO05D004618 3.7e-14 81.6 52 71.2
Nn2g13557 Nelumbo nucifera HOM05D003953 ORTHO05D004618 3.7e-14 81.6 52 71.2
Rhsim13G0075300 Rhododendron simsii HOM05D003953 ORTHO05D004618 3.7e-14 81.6 53 67.9
Haze_19301 Corylus avellana HOM05D003953 ORTHO05D004618 4.8e-14 81.3 52 69.2
CsaV3_1G013120 Cucumis sativus L. HOM05D003953 ORTHO05D004618 4.8e-14 81.3 52 71.2
Eucgr.G01038 Eucalyptus grandis HOM05D003953 ORTHO05D004618 6.3e-14 80.9 52 69.2
Hma1.2p1_0543F.1_g175312 Hydrangea macrophylla HOM05D003953 ORTHO05D004618 6.3e-14 80.9 55 67.3
Hma1.2p1_0543F.1_g175340 Hydrangea macrophylla HOM05D003953 ORTHO05D004618 6.3e-14 80.9 55 67.3
Haze_24228 Corylus avellana HOM05D003953 ORTHO05D004618 8.2e-14 80.5 64 57.8
Nitab4.5_0002142g0080 Nicotiana tabacum HOM05D003953 ORTHO05D004618 8.2e-14 80.5 55 63.6
SEGI_41348 Sequoiadendron giganteum HOM05D003953 ORTHO05D004618 8.2e-14 80.5 56 66.1
Phvul.004G063100 Phaseolus vulgaris HOM05D003953 ORTHO05D004618 1.1e-13 80.1 55 65.5
ATR1136G184 Amborella trichopoda HOM05D003953 ORTHO05D004618 1.4e-13 79.7 57 63.2
FvH4_7g06540 Fragaria vesca HOM05D003953 ORTHO05D004618 1.4e-13 79.7 52 65.4
FAN01G1905 Fragaria x ananassa HOM05D003953 ORTHO05D004618 1.4e-13 79.7 52 65.4
FAN03G1864 Fragaria x ananassa HOM05D003953 ORTHO05D004618 1.4e-13 79.7 52 65.4
FAN10G1677 Fragaria x ananassa HOM05D003953 ORTHO05D004618 1.4e-13 79.7 52 65.4
MBI04_g47172_MAGBIO Magnolia biondii HOM05D003953 ORTHO05D004618 1.4e-13 79.7 52 69.2
RcHm_v2.0_Chr2g0128821 Rosa chinensis HOM05D003953 ORTHO05D004618 1.4e-13 79.7 52 65.4
PGSC0003DMG400013346 Solanum tuberosum HOM05D003953 ORTHO05D004618 1.4e-13 79.7 54 66.7
CAN.G1186.33 Capsicum annuum HOM05D003953 ORTHO05D004618 1.8e-13 79.3 55 65.5
CDE05G2370 Ceratophyllum demersum HOM05D003953 ORTHO05D004618 2.4e-13 79.0 67 55.2
Lalb_Chr21g0317731 Lupinus albus HOM05D003953 ORTHO05D004618 2.4e-13 79.0 52 73.1
Sopen11g006990 Solanum pennellii HOM05D003953 ORTHO05D004618 3.1e-13 78.6 54 66.7
CANSAT54G2674 Cannabis sativa HOM05D003953 ORTHO05D004618 4.1e-13 78.2 53 60.4
Sopen06g001840 Solanum pennellii HOM05D003953 ORTHO05D004618 4.1e-13 78.2 52 67.3
AUR62001716 Chenopodium quinoa HOM05D003953 ORTHO05D004618 5.3e-13 77.8 56 66.1
AUR62020054 Chenopodium quinoa HOM05D003953 ORTHO05D004618 5.3e-13 77.8 56 66.1
Oeu001049.1 Olea europaea HOM05D003953 ORTHO05D004618 5.3e-13 77.8 54 64.8
RcHm_v2.0_Chr1g0334971 Rosa chinensis HOM05D003953 ORTHO05D004618 5.3e-13 77.8 52 63.5
TAR623G0256 Trochodendron aralioides HOM05D003953 ORTHO05D004618 5.3e-13 77.8 52 69.2
EL10Ac7g16096 Beta vulgaris HOM05D003953 ORTHO05D004618 7.0e-13 77.4 56 64.3
Sed0025309 Sechium edule HOM05D003953 ORTHO05D004618 7.0e-13 77.4 52 67.3
Solyc11g012195.1 Solanum lycopersicum HOM05D003953 ORTHO05D004618 7.0e-13 77.4 54 64.8
PGSC0003DMG400020825 Solanum tuberosum HOM05D003953 ORTHO05D004618 7.0e-13 77.4 52 67.3
TAR369G1135 Trochodendron aralioides HOM05D003953 ORTHO05D004618 7.0e-13 77.4 52 69.2
FAN05G4346 Fragaria x ananassa HOM05D003953 ORTHO05D004618 9.1e-13 77.0 52 61.5
Peaxi162Scf00123g01014 Petunia axillaris HOM05D003953 ORTHO05D004618 9.1e-13 77.0 47 72.3
Sed0019378 Sechium edule HOM05D003953 ORTHO05D004618 9.1e-13 77.0 52 67.3
AagrBONN_evm.TU.Sc2ySwM_117.3970 Anthoceros agrestis HOM05D003953 ORTHO05D004618 1.6e-12 76.3 66 54.5
Sc12g0001080 Simmondsia chinensis HOM05D003953 ORTHO05D004618 1.6e-12 76.3 53 66.0
FAN14G2908 Fragaria x ananassa HOM05D003953 ORTHO05D004618 2.0e-12 75.9 52 61.5
Os12g0194700 Oryza sativa ssp. japonica HOM05D003953 ORTHO05D004618 2.0e-12 75.9 53 60.4
Aqoxy128s009 Aquilegia oxysepala HOM05D003953 ORTHO05D004618 2.6e-12 75.5 52 67.3
Hund03162 Selenicereus undatus HOM05D003953 ORTHO05D004618 2.6e-12 75.5 54 63.0
AagrBONN_evm.TU.Sc2ySwM_26.4 Anthoceros agrestis HOM05D003953 ORTHO05D004618 4.5e-12 74.7 66 54.5
AagrBONN_evm.TU.Sc2ySwM_287.2 Anthoceros agrestis HOM05D003953 ORTHO05D004618 4.5e-12 74.7 66 54.5
Pp3c3_11180 Physcomitrium patens HOM05D003953 ORTHO05D004618 4.5e-12 74.7 55 63.6
Ah.13g070310 Amaranthus hybridus HOM05D003953 ORTHO05D004618 5.9e-12 74.3 56 58.9
MD10G1078400 Malus domestica HOM05D003953 ORTHO05D004618 5.9e-12 74.3 52 61.5
Prupe.2G047700 Prunus persica HOM05D003953 ORTHO05D004618 5.9e-12 74.3 52 59.6
FAN02G2926 Fragaria x ananassa HOM05D003953 ORTHO05D004618 7.7e-12 73.9 52 59.6
Dinv34318 Davidia involucrata HOM05D003953 ORTHO05D004618 1.3e-11 73.2 45 73.3
Mapoly0064s0065 Marchantia polymorpha HOM05D003953 ORTHO05D004618 1.3e-11 73.2 55 60.0
AagrBONN_evm.TU.Sc2ySwM_368.2434 Anthoceros agrestis HOM05D003953 ORTHO05D004618 1.7e-11 72.8 66 53.0
Hund04903 Selenicereus undatus HOM05D003953 ORTHO05D004618 2.2e-11 72.4 52 61.5
Prupe.3G125300 Prunus persica HOM05D003953 ORTHO05D004618 2.9e-11 72.0 52 63.5
FAN06G2211 Fragaria x ananassa HOM05D003953 ORTHO05D004618 5.0e-11 71.2 63 54.0
AagrBONN_evm.TU.Sc2ySwM_295.3 Anthoceros agrestis HOM05D003953 ORTHO05D004618 6.5e-11 70.9 66 51.5
Eucgr.G01035 Eucalyptus grandis HOM05D003953 ORTHO05D004618 1.1e-10 70.1 50 66.0
Zm00001eb169140 Zea mays HOM05D003953 ORTHO05D004618 9.4e-10 67.0 56 53.6
Os11g0218100 Oryza sativa ssp. japonica HOM05D003953 ORTHO05D004618 1.2e-09 66.6 53 54.7
Cpa.g.sc112.95 Carica papaya HOM05D003953 ORTHO05D004618 1.6e-09 66.2 52 57.7
Mapoly0079s0034 Marchantia polymorpha HOM05D003953 ORTHO05D004618 6.1e-09 64.3 55 56.4
PSO384G4465 Papaver somniferum HOM05D003953 ORTHO05D004618 6.1e-09 64.3 53 60.4
SMO228G0103 Selaginella moellendorffii HOM05D003953 ORTHO05D004618 1.4e-08 63.2 57 49.1
PSO339G2392 Papaver somniferum HOM05D003953 ORTHO05D004618 5.2e-08 61.2 54 57.4
MCO07G039 Micromonas commoda HOM05D003953 ORTHO05D004618 2.2e-06 55.8 68 36.8
Cre12.g484100 Chlamydomonas reinhardtii HOM05D003953 ORTHO05D004618 4.8e-06 54.7 57 45.6


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