Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g07231 Brassica carinata HOM05D008991 ORTHO05D010442 3.4e-176 622.9 776 100.0
C04p69790 Brassica napus HOM05D008991 ORTHO05D010442 6.7e-164 582.0 776 92.0
BolC4t28480H Brassica oleracea HOM05D008991 ORTHO05D010442 5.0e-111 406.4 776 74.4
BraA04t18682Z Brassica rapa HOM05D008991 ORTHO05D010442 1.1e-97 362.1 777 72.1
BcaB06g29254 Brassica carinata HOM05D008991 ORTHO05D010442 5.1e-87 326.6 797 77.0
AL4G41110 Arabidopsis lyrata HOM05D008991 ORTHO05D010442 2.0e-75 288.1 793 57.4
AT2G42560 Arabidopsis thaliana HOM05D008991 ORTHO05D010442 4.9e-74 283.5 792 53.5
Sp4g24690 Schrenkiella parvula HOM05D008991 ORTHO05D010442 1.5e-67 261.9 796 50.9
BcaNung03228 Brassica carinata HOM05D008991 ORTHO05D010442 2.8e-61 241.1 781 56.3
Carub.0004s2501 Capsella rubella HOM05D008991 ORTHO05D010442 2.6e-59 234.6 791 53.7
A04p32280 Brassica napus HOM05D008991 ORTHO05D010442 4.2e-57 227.3 148 92.6
CARHR137700 Cardamine hirsuta HOM05D008991 ORTHO05D010442 3.1e-52 211.1 772 49.9
BcaB01g03456 Brassica carinata HOM05D008991 ORTHO05D010442 2.1e-48 198.4 799 28.9
Thhalv10017645m.g Eutrema salsugineum HOM05D008991 ORTHO05D010442 7.7e-43 179.9 230 56.1
Aa31LG1G24360 Aethionema arabicum HOM05D008991 ORTHO05D010442 9.7e-30 136.3 210 48.6
BcaNung05214 Brassica carinata HOM05D008991 ORTHO05D010442 1.5e-22 112.5 167 50.9
TWI59G0499 Tripterygium wilfordii HOM05D012920 ORTHO05D012188 6.1e-16 90.5 219 37.0
CiPaw.04G131500 Carya illinoinensis HOM05D008991 ORTHO05D010442 1.4e-15 89.4 171 38.6
Dinv15461 Davidia involucrata HOM05D008991 ORTHO05D010442 2.3e-15 88.6 140 45.0
Cfa014713 Carpinus fangiana HOM05D008991 ORTHO05D010442 9.7e-14 83.2 193 39.9
Migut.H02156 Erythranthe guttata HOM05D008991 ORTHO05D010442 1.4e-12 79.3 146 40.4
Oeu036098.1 Olea europaea HOM05D008991 ORTHO05D010442 1.8e-12 79.0 186 34.4
PGR142G1329 Punica granatum HOM05D008991 ORTHO05D010442 7.0e-12 77.0 147 40.8
Solyc07g053360.4 Solanum lycopersicum HOM05D011296 ORTHO05D013264 7.0e-12 77.0 168 36.9
VMungo0251G0890 Vigna mungo HOM05D013591 ORTHO05D012188 1.2e-11 76.3 72 54.2
Cpa.g.sc209.19 Carica papaya HOM05D008991 ORTHO05D010442 2.0e-11 75.5 160 40.0
Lsat_1_v5_gn_8_139801 Lactuca sativa HOM05D008991 ORTHO05D010442 2.7e-11 75.1 143 42.0
Actinidia30443 Actinidia chinensis HOM05D008991 ORTHO05D010442 7.7e-11 73.6 135 41.5
Haze_13344 Corylus avellana HOM05D008991 ORTHO05D010442 1.0e-10 73.2 184 33.7
Ca_01464_v3 Cicer arietinum L. HOM05D012920 ORTHO05D012188 1.7e-10 72.4 213 33.8
Sabra19G0100600 Salix brachista HOM05D026498 ORTHO05D010442 2.2e-10 72.0 163 34.4
Sabra19G0104000 Salix brachista HOM05D026498 ORTHO05D010442 2.2e-10 72.0 163 33.1
Cc05_g08110 Coffea canephora HOM05D008991 ORTHO05D010442 2.9e-10 71.6 135 40.0
arahy.Tifrunner.gnm1.ann1.ZWAD2N Arachis hypogaea HOM05D013591 ORTHO05D012188 5.0e-10 70.9 89 49.4
Sopen07g027330 Solanum pennellii HOM05D011296 ORTHO05D013264 5.0e-10 70.9 171 36.8
Potri.019G090300 Populus trichocarpa HOM05D026498 ORTHO05D010442 6.5e-10 70.5 149 36.2
CAN.G1360.5 Capsicum annuum HOM05D011296 ORTHO05D013264 8.5e-10 70.1 170 36.5
QL08p041343 Quercus lobata HOM05D008991 ORTHO05D010442 1.9e-09 68.9 216 32.4
CiPaw.03G186100 Carya illinoinensis HOM05D008991 ORTHO05D010442 4.2e-09 67.8 161 41.6
Peaxi162Scf00469g00010 Petunia axillaris HOM05D011296 ORTHO05D010442 5.5e-09 67.4 205 31.7
TPR.G11587 Trifolium pratense HOM05D012920 ORTHO05D012188 2.1e-08 65.5 88 42.0
Potri.013G118600 Populus trichocarpa HOM05D026498 ORTHO05D010442 4.7e-08 64.3 162 34.0
Psat5g276240 Pisum sativum HOM05D012920 ORTHO05D012188 6.1e-08 63.9 81 45.7
Ciclev10014817m.g Citrus clementina HOM05D008991 ORTHO05D010442 1.0e-07 63.2 213 28.6
Lj3g0021605 Lotus japonicus HOM05D012920 ORTHO05D012188 3.0e-07 61.6 77 42.9
Gohir.D11G064300 Gossypium hirsutum HOM05D020995 ORTHO05D010442 4.0e-07 61.2 238 26.9
CANSAT64G0119 Cannabis sativa HOM05D008991 ORTHO05D010442 6.8e-07 60.5 196 35.2
Gorai.007G069500 Gossypium raimondii HOM05D020995 ORTHO05D010442 8.8e-07 60.1 241 26.6
Manes.13G139000 Manihot esculenta HOM05D012920 ORTHO05D012188 8.8e-07 60.1 226 29.2
SalBow7G0518 Salvia bowleyana HOM05D008991 ORTHO05D010442 8.8e-07 60.1 141 33.3
MELO3C019755.2 Cucumis melo HOM05D024384 ORTHO05D010442 1.5e-06 59.3 193 30.1
CsaV3_6G018720 Cucumis sativus L. HOM05D024384 ORTHO05D010442 2.6e-06 58.5 193 30.6
Hma1.2p1_0178F.1_g079010 Hydrangea macrophylla HOM05D011296 ORTHO05D013264 3.4e-06 58.2 158 34.2
Psat5g275760 Pisum sativum HOM05D012920 ORTHO05D012188 4.4e-06 57.8 200 33.0
PGR142G3325 Punica granatum HOM05D020995 ORTHO05D010442 4.4e-06 57.8 149 37.6
DCAR_009769 Daucus carota HOM05D008991 ORTHO05D010442 5.7e-06 57.4 135 36.3
Atru.chr6.2817 Acer truncatum HOM05D015016 ORTHO05D016410 7.5e-06 57.0 42 66.7
ClCG02G017970 Citrullus lanatus HOM05D024384 ORTHO05D010442 7.5e-06 57.0 215 29.3


User provided reference genes

Program Settings