Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g04711 Brassica carinata HOM05D007304 ORTHO05D009233 1.0e-122 443.4 211 100.0
C03p34620 Brassica napus HOM05D007304 ORTHO05D009233 2.2e-122 442.2 211 99.5
BolC3t15773H Brassica oleracea HOM05D007304 ORTHO05D009233 2.2e-122 442.2 211 99.5
A03p28640 Brassica napus HOM05D007304 ORTHO05D009233 3.0e-119 431.8 212 97.6
BraA03t12064Z Brassica rapa HOM05D007304 ORTHO05D009233 4.0e-119 431.4 212 98.1
AL6G43210 Arabidopsis lyrata HOM05D007304 ORTHO05D009233 1.6e-104 382.9 213 85.9
AT4G09620 Arabidopsis thaliana HOM05D007304 ORTHO05D009233 1.8e-103 379.4 211 85.3
Sp6g07990 Schrenkiella parvula HOM05D007304 ORTHO05D009233 5.2e-103 377.9 213 87.3
Carub.0006s2806 Capsella rubella HOM05D007304 ORTHO05D009233 2.0e-102 375.9 211 84.8
CARHR260470 Cardamine hirsuta HOM05D007304 ORTHO05D009233 8.9e-95 350.5 212 80.2
Thhalv10028979m.g Eutrema salsugineum HOM05D007304 ORTHO05D009233 1.1e-89 333.6 212 78.8
BcaB01g02784 Brassica carinata HOM05D007304 ORTHO05D009233 2.7e-83 312.4 226 69.9
Aa31LG9G14900 Aethionema arabicum HOM05D007304 ORTHO05D009233 7.3e-81 304.3 211 69.7
THA.LOC104816302 Tarenaya hassleriana HOM05D007304 ORTHO05D009233 1.1e-79 300.4 211 69.7
MELO3C008119.2 Cucumis melo HOM05D007304 ORTHO05D009233 6.0e-67 258.1 218 59.6
Manes.02G191500 Manihot esculenta HOM05D007304 ORTHO05D009233 1.3e-66 256.9 218 58.3
CsaV3_2G033470 Cucumis sativus L. HOM05D007304 ORTHO05D009233 2.3e-66 256.1 219 58.9
Cfa018186 Carpinus fangiana HOM05D007304 ORTHO05D009233 3.9e-66 255.4 218 59.2
Sed0026932 Sechium edule HOM05D007304 ORTHO05D009233 1.5e-65 253.4 223 58.7
Gohir.A02G060400 Gossypium hirsutum HOM05D007304 ORTHO05D009233 5.6e-65 251.5 214 58.9
Sopen11g009380 Solanum pennellii HOM05D007304 ORTHO05D009233 9.6e-65 250.8 217 56.2
TPR.G8829 Trifolium pratense HOM05D007304 ORTHO05D009233 9.6e-65 250.8 219 60.3
PGSC0003DMG400009226 Solanum tuberosum HOM05D007304 ORTHO05D009233 1.3e-64 250.4 217 56.2
CAN.G1530.5 Capsicum annuum HOM05D007304 ORTHO05D009233 2.8e-64 249.2 215 57.2
ClCG11G008190 Citrullus lanatus HOM05D007304 ORTHO05D009233 3.6e-64 248.8 221 57.0
CSS0049262 Camellia sinensis var. sinensis HOM05D007304 ORTHO05D009233 6.2e-64 248.1 217 57.6
TAR376G0332 Trochodendron aralioides HOM05D007304 ORTHO05D009233 8.1e-64 247.7 223 57.0
Ca_10612_v3 Cicer arietinum L. HOM05D007304 ORTHO05D009233 1.4e-63 246.9 219 58.9
Peaxi162Scf00310g00614 Petunia axillaris HOM05D007304 ORTHO05D009233 1.8e-63 246.5 216 57.4
Lj5g0021067 Lotus japonicus HOM05D007304 ORTHO05D009233 5.3e-63 245.0 219 58.0
Nitab4.5_0000422g0040 Nicotiana tabacum HOM05D007304 ORTHO05D009233 9.0e-63 244.2 217 56.2
CiPaw.16G062000 Carya illinoinensis HOM05D007304 ORTHO05D009233 1.2e-62 243.8 219 56.2
Gorai.005G074700 Gossypium raimondii HOM05D007304 ORTHO05D009233 1.2e-62 243.8 216 57.9
SalBow6G2896 Salvia bowleyana HOM05D007304 ORTHO05D009233 1.2e-62 243.8 217 53.9
Ciclev10002467m.g Citrus clementina HOM05D007304 ORTHO05D009233 2.0e-62 243.0 218 56.9
Thecc.08G182300 Theobroma cacao HOM05D007304 ORTHO05D009233 2.0e-62 243.0 218 56.4
Lalb_Chr06g0162071 Lupinus albus HOM05D007304 ORTHO05D009233 4.5e-62 241.9 222 58.6
GSVIVG01034475001 Vitis vinifera HOM05D007304 ORTHO05D009233 4.5e-62 241.9 216 56.5
Potri.013G113500 Populus trichocarpa HOM05D007304 ORTHO05D009233 5.8e-62 241.5 219 57.1
VMungo0720G1999 Vigna mungo HOM05D007304 ORTHO05D009233 5.8e-62 241.5 217 55.8
AUR62023569 Chenopodium quinoa HOM05D007304 ORTHO05D009233 2.2e-61 239.6 222 55.9
Phvul.007G089900 Phaseolus vulgaris HOM05D007304 ORTHO05D009233 2.2e-61 239.6 214 57.5
QL02p033889 Quercus lobata HOM05D007304 ORTHO05D009233 2.9e-61 239.2 218 54.6
Medtr1g096340 Medicago truncatula HOM05D007304 ORTHO05D009233 3.8e-61 238.8 214 57.0
AUR62004650 Chenopodium quinoa HOM05D007304 ORTHO05D009233 4.9e-61 238.4 222 55.9
Glyma.20G175900 Glycine max HOM05D007304 ORTHO05D009233 4.9e-61 238.4 219 57.5
Nitab4.5_0000560g0190 Nicotiana tabacum HOM05D007304 ORTHO05D009233 6.4e-61 238.0 217 54.4
Duzib177G0769 Durio zibethinus HOM05D007304 ORTHO05D009233 8.4e-61 237.7 220 55.5
Rhsim11G0060100 Rhododendron simsii HOM05D007304 ORTHO05D009233 8.4e-61 237.7 215 57.2
RhsimUnG0069500 Rhododendron simsii HOM05D007304 ORTHO05D009233 8.4e-61 237.7 215 57.2
COL.COLO4_22675 Corchorus olitorius HOM05D007304 ORTHO05D009233 3.2e-60 235.7 158 66.5
arahy.Tifrunner.gnm1.ann1.W17VPE Arachis hypogaea HOM05D007304 ORTHO05D009233 4.2e-60 235.3 214 57.5
Aqoxy5G02599 Aquilegia oxysepala HOM05D007304 ORTHO05D009233 5.4e-60 235.0 148 71.6
arahy.Tifrunner.gnm1.ann1.E78XAF Arachis hypogaea HOM05D007304 ORTHO05D009233 7.1e-60 234.6 214 57.0
EL10Ac8g20249 Beta vulgaris HOM05D007304 ORTHO05D009233 7.1e-60 234.6 160 68.8
Nn5g27732 Nelumbo nucifera HOM05D007304 ORTHO05D009233 7.1e-60 234.6 188 60.6
Psat6g187320 Pisum sativum HOM05D007304 ORTHO05D009233 9.3e-60 234.2 220 56.8
Atru.chr13.1788 Acer truncatum HOM05D007304 ORTHO05D009233 2.1e-59 233.0 217 53.9
Atru.chr13.1792 Acer truncatum HOM05D007304 ORTHO05D009233 2.1e-59 233.0 217 53.9
Migut.N03345 Erythranthe guttata HOM05D007304 ORTHO05D009233 2.7e-59 232.6 217 55.8
Gohir.D02G065833 Gossypium hirsutum HOM05D007304 ORTHO05D009233 3.5e-59 232.3 186 61.8
TWI32G0836 Tripterygium wilfordii HOM05D007304 ORTHO05D009233 3.5e-59 232.3 158 68.4
Lj4P501T9 Lonicera japonica HOM05D007304 ORTHO05D009233 4.6e-59 231.9 172 64.0
Haze_17932 Corylus avellana HOM05D007304 ORTHO05D009233 6.0e-59 231.5 171 63.7
PSO063G3154 Papaver somniferum HOM05D007304 ORTHO05D009233 1.3e-58 230.3 168 63.7
Cc10_g11390 Coffea canephora HOM05D007304 ORTHO05D009233 2.3e-58 229.6 160 62.5
Ah.07g202740 Amaranthus hybridus HOM05D007304 ORTHO05D009233 3.0e-58 229.2 213 54.9
MSTRG.22445 Avicennia marina HOM05D007304 ORTHO05D009233 3.0e-58 229.2 216 51.9
CANSAT25G3778 Cannabis sativa HOM05D007304 ORTHO05D009233 3.9e-58 228.8 217 55.8
DCAR_011537 Daucus carota HOM05D007304 ORTHO05D009233 6.7e-58 228.0 147 67.3
PSO017G3329 Papaver somniferum HOM05D007304 ORTHO05D009233 1.5e-57 226.9 159 65.4
PGR102G2268 Punica granatum HOM05D007304 ORTHO05D009233 1.9e-57 226.5 159 63.5
MBI17_g27205_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 4.3e-57 225.3 225 52.9
Hund27084 Selenicereus undatus HOM05D007304 ORTHO05D009233 1.6e-56 223.4 145 68.3
Sabra13G0096200 Salix brachista HOM05D007304 ORTHO05D009233 2.8e-56 222.6 194 57.7
Oeu039601.1 Olea europaea HOM05D007304 ORTHO05D009233 1.4e-55 220.3 219 53.0
SGA_v2.0_scaffold149G36602 Striga asiatica HOM05D007304 ORTHO05D009233 2.4e-55 219.5 216 52.8
FAN04G0833 Fragaria x ananassa HOM05D007304 ORTHO05D009233 4.0e-55 218.8 214 52.8
FAN13G2406 Fragaria x ananassa HOM05D007304 ORTHO05D009233 6.9e-55 218.0 214 52.8
ECA246G3843 Erigeron canadensis HOM05D007304 ORTHO05D009233 1.2e-54 217.2 219 53.4
FvH4_5g27630 Fragaria vesca HOM05D007304 ORTHO05D009233 1.5e-54 216.9 214 52.3
Actinidia29417 Actinidia chinensis HOM05D004490 ORTHO05D005353 3.4e-54 215.7 201 57.7
Dinv41708 Davidia involucrata HOM05D007304 ORTHO05D009233 5.8e-54 214.9 205 55.6
MD05G1041300 Malus domestica HOM05D007304 ORTHO05D009233 7.6e-54 214.5 167 61.7
Lsat_1_v5_gn_6_109640 Lactuca sativa HOM05D007304 ORTHO05D009233 1.0e-53 214.2 211 52.1
RcHm_v2.0_Chr7g0219041 Rosa chinensis HOM05D007304 ORTHO05D009233 1.3e-53 213.8 214 51.9
SEGI_32747 Sequoiadendron giganteum HOM05D007304 ORTHO05D009233 3.8e-53 212.2 140 69.3
Zm00001eb063940 Zea mays HOM05D007304 ORTHO05D009233 1.1e-52 210.7 217 51.2
HanXRQChr05g0150521 Helianthus annuus HOM05D007304 ORTHO05D009233 1.4e-52 210.3 217 51.6
HPP92_003142 Vanilla planifolia HOM05D007304 ORTHO05D009233 1.4e-52 210.3 140 65.0
Eucgr.F04126 Eucalyptus grandis HOM05D007304 ORTHO05D009233 1.3e-50 203.8 197 54.8
Sc26g0000380 Simmondsia chinensis HOM05D007304 ORTHO05D009233 3.3e-49 199.1 189 50.3
Os03g0838900 Oryza sativa ssp. japonica HOM05D007304 ORTHO05D009233 1.3e-45 187.2 168 53.0
SMO200G0124 Selaginella moellendorffii HOM05D007304 ORTHO05D009233 3.0e-42 176.0 134 53.7
Mapoly0175s0009 Marchantia polymorpha HOM05D007304 ORTHO05D009233 6.7e-42 174.9 144 52.8
Cpa.g.sc66.48 Carica papaya HOM05D007304 ORTHO05D009233 8.5e-37 157.9 118 64.4
unitig_21.g20192 Utricularia gibba HOM05D007304 ORTHO05D009233 8.5e-37 157.9 137 51.8
AagrBONN_evm.TU.Sc2ySwM_117.12 Anthoceros agrestis HOM05D007304 ORTHO05D009233 2.7e-35 152.9 144 48.6
Pp3c24_12240 Physcomitrium patens HOM05D007304 ORTHO05D009233 8.2e-32 141.4 139 45.3
Cre10.g445100 Chlamydomonas reinhardtii HOM05D007304 ORTHO05D009233 5.5e-28 128.6 146 41.8
CDE02G2755 Ceratophyllum demersum HOM05D000288 ORTHO05D000173 1.6e-27 127.1 82 65.9
Prupe.8G057100 Prunus persica HOM05D007304 ORTHO05D009233 4.5e-22 109.0 144 45.8
SalBow6G1917 Salvia bowleyana HOM05D007304 ORTHO05D009233 2.5e-20 103.2 138 39.9
MCO03G180 Micromonas commoda HOM05D007304 ORTHO05D009233 5.5e-20 102.1 168 32.7
Solyc11g017430.3 Solanum lycopersicum HOM05D007304 ORTHO05D009233 9.4e-20 101.3 52 80.8
MBI11_g39361_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 7.5e-17 91.7 56 75.0
MD10G1047700 Malus domestica HOM05D007304 ORTHO05D009233 1.4e-10 70.9 44 68.2
Zm00001eb272990 Zea mays HOM05D007304 ORTHO05D009233 4.8e-08 62.4 77 40.3
AUR62006400 Chenopodium quinoa HOM05D000161 ORTHO05D000111 2.0e-06 57.0 76 34.2


User provided reference genes

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