Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g03929 Brassica carinata HOM05D001038 ORTHO05D010946 0.0e+00 1320.8 698 100.0
BcaC03g14544 Brassica carinata HOM05D001038 ORTHO05D010946 0.0e+00 1154.0 720 88.3
C06p00840 Brassica napus HOM05D001038 ORTHO05D010946 8.9e-208 727.6 558 71.9
BcaC08g45228 Brassica carinata HOM05D001038 ORTHO05D010946 2.2e-118 430.6 719 42.1
BcaB08g34843 Brassica carinata HOM05D001038 ORTHO05D010946 2.6e-114 417.2 723 40.1
BolC3t15494H Brassica oleracea HOM05D001038 ORTHO05D010946 1.1e-109 401.7 726 37.7
A09p58390 Brassica napus HOM05D001038 ORTHO05D010946 2.7e-108 397.1 232 94.0
BolC2t08169H Brassica oleracea HOM05D001038 ORTHO05D010946 1.5e-85 321.6 732 34.7
BolC3t20322H Brassica oleracea HOM05D001038 ORTHO05D010946 9.5e-85 318.9 210 79.5
C03p31470 Brassica napus HOM05D001038 ORTHO05D010946 2.3e-75 287.7 334 45.8
BcaB01g02361 Brassica carinata HOM05D001038 ORTHO05D010946 8.6e-70 269.2 484 39.0
Thhalv10009967m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 2.3e-46 191.4 752 26.3
BcaB01g02416 Brassica carinata HOM05D011654 ORTHO05D010946 2.5e-45 188.0 716 27.1
A04p08430 Brassica napus HOM05D001038 ORTHO05D010946 4.8e-44 183.7 193 49.7
BcaB08g36238 Brassica carinata HOM05D011654 ORTHO05D010946 1.8e-43 181.8 640 27.8
BcaC01g04978 Brassica carinata HOM05D001038 ORTHO05D010946 3.1e-43 181.0 207 45.4
Thhalv10023964m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 7.6e-42 176.4 341 34.6
BcaB01g01507 Brassica carinata HOM05D011654 ORTHO05D010946 1.4e-40 172.2 666 26.0
C05p38700 Brassica napus HOM05D037879 ORTHO05D027353 9.3e-40 169.5 322 30.7
BolC9t55839H Brassica oleracea HOM05D001038 ORTHO05D016703 3.9e-38 164.1 742 24.4
C05p34670 Brassica napus HOM05D001038 ORTHO05D032287 2.5e-37 161.4 340 31.5
BolC2t07874H Brassica oleracea HOM05D001038 ORTHO05D010946 7.4e-37 159.8 671 24.7
C09p60390 Brassica napus HOM05D001038 ORTHO05D016703 1.6e-36 158.7 679 25.5
Thhalv10003372m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 3.1e-35 154.5 744 25.7
C09p31530 Brassica napus HOM05D020314 ORTHO05D032005 2.6e-34 151.4 327 29.1
BolC5t31712H Brassica oleracea HOM05D001038 ORTHO05D032287 5.8e-34 150.2 345 28.7
Thhalv10003408m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 1.6e-31 142.1 233 34.8
Thhalv10002173m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 3.5e-31 141.0 711 22.6
BraA04t16531Z Brassica rapa HOM05D001038 ORTHO05D010946 2.3e-30 138.3 182 44.0
C04p20500 Brassica napus HOM05D001038 ORTHO05D010946 1.5e-29 135.6 183 43.2
BolC4t23575H Brassica oleracea HOM05D001038 ORTHO05D010946 1.5e-29 135.6 183 43.2
Thhalv10002975m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 2.5e-29 134.8 706 24.9
Thhalv10002771m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 3.3e-29 134.4 288 27.8
BolC2t11293H Brassica oleracea HOM05D001038 ORTHO05D019962 5.7e-29 133.7 723 25.0
BraA05t19810Z Brassica rapa HOM05D001038 ORTHO05D016703 1.3e-28 132.5 715 24.2
A04p22180 Brassica napus HOM05D001038 ORTHO05D000395 2.1e-28 131.7 760 23.3
BcaC05g28246 Brassica carinata HOM05D001038 ORTHO05D031796 2.8e-28 131.3 562 25.8
C09p22250 Brassica napus HOM05D001038 ORTHO05D000395 1.4e-27 129.0 491 28.3
BraA09t41072Z Brassica rapa HOM05D001038 ORTHO05D000395 1.4e-27 129.0 739 22.9
BcaB02g10939 Brassica carinata HOM05D001038 ORTHO05D000395 3.1e-27 127.9 684 23.7
C05p37200 Brassica napus HOM05D001038 ORTHO05D017560 4.1e-27 127.5 327 30.6
BolC7t40492H Brassica oleracea HOM05D001038 ORTHO05D010763 6.9e-27 126.7 298 31.2
BcaB08g34565 Brassica carinata HOM05D001038 ORTHO05D000395 9.0e-27 126.3 736 23.4
C02p52080 Brassica napus HOM05D001038 ORTHO05D019962 1.2e-26 125.9 731 24.9
BcaNung00229 Brassica carinata HOM05D001038 ORTHO05D000395 1.0e-25 122.9 733 21.3
A10p08770 Brassica napus HOM05D001038 ORTHO05D016776 2.2e-25 121.7 295 29.8
BolC7t41684H Brassica oleracea HOM05D001038 ORTHO05D010763 2.2e-25 121.7 369 29.3
BcaB05g25087 Brassica carinata HOM05D001038 ORTHO05D000395 3.8e-25 120.9 739 22.5
A09p34780 Brassica napus HOM05D001038 ORTHO05D000395 5.0e-25 120.6 733 24.3
BcaB04g17766 Brassica carinata HOM05D001038 ORTHO05D000395 8.5e-25 119.8 735 22.0
Thhalv10029129m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 1.1e-24 119.4 712 20.5
C09p42070 Brassica napus HOM05D001038 ORTHO05D021947 3.2e-24 117.9 733 22.4
Thhalv10023140m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 4.2e-24 117.5 286 25.5
C05p42760 Brassica napus HOM05D001038 ORTHO05D031796 5.5e-24 117.1 522 25.9
C07p60310 Brassica napus HOM05D001038 ORTHO05D000395 7.2e-24 116.7 247 38.1
BcaB01g01915 Brassica carinata HOM05D001038 ORTHO05D000395 9.3e-24 116.3 704 24.0
BraSC37t46126Z Brassica rapa HOM05D001038 ORTHO05D016776 1.6e-23 115.5 756 23.7
BcaC08g47005 Brassica carinata HOM05D001038 ORTHO05D000395 2.7e-23 114.8 664 25.6
BcaB04g17277 Brassica carinata HOM05D001038 ORTHO05D014932 4.6e-23 114.0 331 26.9
BolC7t41626H Brassica oleracea HOM05D001038 ORTHO05D014932 6.1e-23 113.6 334 23.7
BraA04t17267Z Brassica rapa HOM05D001038 ORTHO05D014932 6.1e-23 113.6 330 26.4
BcaB05g22891 Brassica carinata HOM05D001038 ORTHO05D010763 1.0e-22 112.8 333 29.4
BcaB06g28199 Brassica carinata HOM05D001038 ORTHO05D010946 1.0e-22 112.8 339 28.6
BcaC05g25823 Brassica carinata HOM05D001038 ORTHO05D014932 1.0e-22 112.8 334 24.0
BcaB08g35416 Brassica carinata HOM05D001038 ORTHO05D017560 1.8e-22 112.1 306 29.1
BcaC03g17929 Brassica carinata HOM05D001038 ORTHO05D000395 1.8e-22 112.1 745 22.3
BcaB02g06555 Brassica carinata HOM05D001038 ORTHO05D010763 2.3e-22 111.7 416 26.9
BcaB03g16260 Brassica carinata HOM05D001038 ORTHO05D019962 5.1e-22 110.5 753 23.0
BcaB07g30174 Brassica carinata HOM05D001038 ORTHO05D000395 6.7e-22 110.2 689 23.8
BcaC01g04979 Brassica carinata HOM05D001038 ORTHO05D010946 6.7e-22 110.2 316 30.1
BcaC06g33888 Brassica carinata HOM05D001038 ORTHO05D017617 6.7e-22 110.2 550 25.8
BcaC08g46980 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-21 109.4 695 22.7
BcaC05g26744 Brassica carinata HOM05D001038 ORTHO05D000395 1.5e-21 109.0 738 21.0
C06p10570 Brassica napus HOM05D001038 ORTHO05D014932 1.5e-21 109.0 334 22.8
A09p58380 Brassica napus HOM05D001038 ORTHO05D000395 1.9e-21 108.6 69 82.6
C06p00850 Brassica napus HOM05D001038 ORTHO05D101937 2.5e-21 108.2 51 98.0
C07p12170 Brassica napus HOM05D001038 ORTHO05D010763 2.5e-21 108.2 706 22.7
C07p15560 Brassica napus HOM05D001038 ORTHO05D000395 3.3e-21 107.8 742 21.8
BcaB07g33328 Brassica carinata HOM05D001038 ORTHO05D010763 5.7e-21 107.1 334 27.2
BcaNung01360 Brassica carinata HOM05D001038 ORTHO05D010763 2.2e-20 105.1 374 25.7
BcaB06g28161 Brassica carinata HOM05D001038 ORTHO05D000395 2.8e-20 104.8 731 21.3
BcaB06g25472 Brassica carinata HOM05D001038 ORTHO05D010763 3.7e-20 104.4 661 22.7
BcaC01g05566 Brassica carinata HOM05D023990 ORTHO05D032040 3.7e-20 104.4 540 24.3
BolC7t41164H Brassica oleracea HOM05D001038 ORTHO05D000395 3.7e-20 104.4 655 22.0
BcaB06g26737 Brassica carinata HOM05D001038 ORTHO05D010763 6.3e-20 103.6 330 26.4
BcaC09g51573 Brassica carinata HOM05D001038 ORTHO05D000395 8.2e-20 103.2 211 34.6
BraA06t25412Z Brassica rapa HOM05D001038 ORTHO05D017560 8.2e-20 103.2 339 26.8
BcaB06g28131 Brassica carinata HOM05D001038 ORTHO05D000395 2.4e-19 101.7 682 23.3
C08p22730 Brassica napus HOM05D001038 ORTHO05D016776 2.4e-19 101.7 752 22.5
BcaB02g10814 Brassica carinata HOM05D001038 ORTHO05D010946 4.1e-19 100.9 312 24.0
BolC4t27749H Brassica oleracea HOM05D001038 ORTHO05D016776 4.1e-19 100.9 276 28.3
BcaB05g21586 Brassica carinata HOM05D001038 ORTHO05D000395 6.9e-19 100.1 205 34.6
BolC3t14874H Brassica oleracea HOM05D001038 ORTHO05D010763 1.5e-18 99.0 146 37.0
C05p48930 Brassica napus HOM05D001038 ORTHO05D016716 3.4e-18 97.8 735 20.5
BolC5t33633H Brassica oleracea HOM05D001038 ORTHO05D016716 3.4e-18 97.8 735 20.5
BcaB03g16464 Brassica carinata HOM05D001038 ORTHO05D018589 4.5e-18 97.4 644 22.5
BcaC09g49024 Brassica carinata HOM05D001038 ORTHO05D000395 4.5e-18 97.4 701 22.5
BraA10t43039Z Brassica rapa HOM05D001038 ORTHO05D000395 2.2e-17 95.1 755 22.0
Thhalv10001261m.g Eutrema salsugineum HOM05D001038 ORTHO05D010763 5.0e-17 94.0 322 23.9
BolC1t03990H Brassica oleracea HOM05D001038 ORTHO05D000395 6.5e-17 93.6 140 40.7
BolC7t44786H Brassica oleracea HOM05D001038 ORTHO05D000395 1.1e-16 92.8 106 50.0
C07p34820 Brassica napus HOM05D001038 ORTHO05D000395 4.2e-16 90.9 673 22.3
C08p17260 Brassica napus HOM05D001038 ORTHO05D102554 4.2e-16 90.9 103 50.5
BcaB07g32567 Brassica carinata HOM05D001038 ORTHO05D010763 3.6e-15 87.8 348 26.4
BolC5t32403H Brassica oleracea HOM05D001038 ORTHO05D016716 6.1e-15 87.0 680 20.4
BolC7t41688H Brassica oleracea HOM05D001038 ORTHO05D000395 6.1e-15 87.0 740 21.4
BcaNung04782 Brassica carinata HOM05D001038 ORTHO05D014932 7.9e-15 86.7 310 27.4
BraA02t08689Z Brassica rapa HOM05D001038 ORTHO05D010763 7.9e-15 86.7 293 24.9
BcaB06g26982 Brassica carinata HOM05D001038 ORTHO05D000395 1.0e-14 86.3 736 22.3
Thhalv10003093m.g Eutrema salsugineum HOM05D001038 ORTHO05D010763 1.4e-14 85.9 214 27.1
BcaB06g27217 Brassica carinata HOM05D020314 ORTHO05D010946 7.4e-13 80.1 535 24.5
C07p09720 Brassica napus HOM05D001038 ORTHO05D010763 7.4e-13 80.1 313 25.6
BraA05t21228Z Brassica rapa HOM05D001038 ORTHO05D018589 7.4e-13 80.1 655 23.1
C03p31460 Brassica napus HOM05D001038 ORTHO05D000395 9.7e-13 79.7 115 46.1
BcaB07g33657 Brassica carinata HOM05D000428 ORTHO05D000582 1.3e-12 79.3 454 25.1
C04p58380 Brassica napus HOM05D001038 ORTHO05D010763 1.7e-12 79.0 173 28.3
BolC9t58942H Brassica oleracea HOM05D001038 ORTHO05D010763 1.7e-12 79.0 684 21.8
BcaC05g27501 Brassica carinata HOM05D001038 ORTHO05D032287 3.7e-12 77.8 443 26.0
C02p45450 Brassica napus HOM05D001038 ORTHO05D017560 3.1e-11 74.7 216 25.5
BcaB01g01303 Brassica carinata HOM05D001038 ORTHO05D000395 5.3e-11 73.9 339 22.1
BolC9t56412H Brassica oleracea HOM05D001038 ORTHO05D000395 5.3e-11 73.9 285 27.4
BcaC01g03469 Brassica carinata HOM05D036624 ORTHO05D032630 1.5e-10 72.4 262 30.2
BolC2t11347H Brassica oleracea HOM05D001038 ORTHO05D000395 2.6e-10 71.6 135 34.1
A05p23600 Brassica napus HOM05D001038 ORTHO05D018589 3.4e-10 71.2 674 22.4
BolC5t33003H Brassica oleracea HOM05D001038 ORTHO05D031796 3.4e-10 71.2 380 25.5
Carub.0013s0014 Capsella rubella HOM05D001038 ORTHO05D000395 3.4e-10 71.2 287 22.0
BcaB07g31666 Brassica carinata HOM05D001038 ORTHO05D000395 4.5e-10 70.9 139 33.8
C03p24850 Brassica napus HOM05D023990 ORTHO05D032040 7.7e-10 70.1 442 22.4
BolC3t14873H Brassica oleracea HOM05D023990 ORTHO05D032040 7.7e-10 70.1 442 22.4
BcaB03g16578 Brassica carinata HOM05D001038 ORTHO05D000395 5.0e-09 67.4 416 26.0
BcaC08g43867 Brassica carinata HOM05D001038 ORTHO05D032356 5.0e-09 67.4 125 35.2
BcaB05g23741 Brassica carinata HOM05D000373 ORTHO05D000395 6.5e-09 67.0 103 37.9
C06p12520 Brassica napus HOM05D001038 ORTHO05D032356 6.5e-09 67.0 137 35.0
BolC6t36405H Brassica oleracea HOM05D001038 ORTHO05D032356 6.5e-09 67.0 137 35.0
BcaC08g43120 Brassica carinata HOM05D001038 ORTHO05D032078 8.5e-09 66.6 91 41.8
BcaB06g26967 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-08 66.2 92 41.3
C06p03930 Brassica napus HOM05D001038 ORTHO05D000395 1.4e-08 65.9 129 38.8
BolC5t32344H Brassica oleracea HOM05D001038 ORTHO05D017560 1.4e-08 65.9 293 24.6
BraA04t16532Z Brassica rapa HOM05D001038 ORTHO05D000395 1.9e-08 65.5 56 55.4
C05p38680 Brassica napus HOM05D001038 ORTHO05D000395 3.2e-08 64.7 144 36.8
BraA06t24545Z Brassica rapa HOM05D001038 ORTHO05D024045 3.2e-08 64.7 306 23.5
BraA08t34217Z Brassica rapa HOM05D001038 ORTHO05D016716 3.2e-08 64.7 169 26.6
BcaB01g01825 Brassica carinata HOM05D001038 ORTHO05D000395 4.2e-08 64.3 236 28.0
BcaB08g35558 Brassica carinata HOM05D001038 ORTHO05D000395 4.2e-08 64.3 571 22.2
BcaNung00468 Brassica carinata HOM05D001038 ORTHO05D000395 4.2e-08 64.3 518 22.0
C06p26270 Brassica napus HOM05D001038 ORTHO05D017617 4.2e-08 64.3 414 25.6
C05p36210 Brassica napus HOM05D001038 ORTHO05D017560 7.2e-08 63.5 171 28.1
BolC5t32608H Brassica oleracea HOM05D001038 ORTHO05D000395 7.2e-08 63.5 140 35.0
BolC8t47295H Brassica oleracea HOM05D001038 ORTHO05D000395 7.2e-08 63.5 171 25.7
BraA05t20300Z Brassica rapa HOM05D001038 ORTHO05D000395 7.2e-08 63.5 130 34.6
BraA02t06821Z Brassica rapa HOM05D001038 ORTHO05D000395 1.6e-07 62.4 366 22.4
A06p18460 Brassica napus HOM05D001038 ORTHO05D039511 2.1e-07 62.0 72 43.1
BcaC06g32416 Brassica carinata HOM05D001038 ORTHO05D017617 2.7e-07 61.6 133 31.6
BNapus_Darmor_BZH_scaffold_38p00010 Brassica napus HOM05D001038 ORTHO05D010946 2.7e-07 61.6 67 46.3
C09p12400 Brassica napus HOM05D001038 ORTHO05D019962 3.6e-07 61.2 232 28.4
BcaNung02282 Brassica carinata HOM05D001038 ORTHO05D000395 6.1e-07 60.5 71 52.1
A01p01820 Brassica napus HOM05D001038 ORTHO05D000395 6.1e-07 60.5 161 28.0
BcaB02g11035 Brassica carinata HOM05D001038 ORTHO05D000395 1.4e-06 59.3 405 24.2
BcaB08g34782 Brassica carinata HOM05D001038 ORTHO05D000395 1.4e-06 59.3 469 21.3
BcaC03g15415 Brassica carinata HOM05D001038 ORTHO05D000395 1.4e-06 59.3 80 42.5
A01p23200 Brassica napus HOM05D001038 ORTHO05D000395 1.4e-06 59.3 157 31.2
BcaB02g10826 Brassica carinata HOM05D001038 ORTHO05D021697 3.0e-06 58.2 134 25.4
BcaC04g22192 Brassica carinata HOM05D001038 ORTHO05D017617 3.9e-06 57.8 210 27.6
AL8G20830 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 5.2e-06 57.4 108 25.0
BcaB01g04196 Brassica carinata HOM05D001038 ORTHO05D000395 8.8e-06 56.6 84 35.7
BcaB03g14886 Brassica carinata HOM05D001038 ORTHO05D010946 8.8e-06 56.6 167 26.9
SpUn0001_0060 Schrenkiella parvula HOM05D011654 ORTHO05D010946 8.8e-06 56.6 101 30.7


User provided reference genes

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