Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g03420 Brassica carinata HOM05D000123 ORTHO05D093926 5.2e-50 200.7 97 100.0
BcaC01g03422 Brassica carinata HOM05D000123 ORTHO05D000064 2.1e-35 152.1 123 67.5
BcaC01g03417 Brassica carinata HOM05D000123 ORTHO05D000064 6.2e-27 124.0 94 69.1
BcaC01g03425 Brassica carinata HOM05D000123 ORTHO05D000064 6.2e-27 124.0 94 69.1
C03p52720 Brassica napus HOM05D000123 ORTHO05D000064 1.8e-26 122.5 94 68.1
BolC3t17544H Brassica oleracea HOM05D000123 ORTHO05D000064 1.8e-26 122.5 94 68.1
C03p52770 Brassica napus HOM05D000123 ORTHO05D000064 3.1e-26 121.7 94 68.1
A03p42960 Brassica napus HOM05D000123 ORTHO05D000064 4.9e-24 114.4 94 64.9
BraA03t13440Z Brassica rapa HOM05D000123 ORTHO05D000064 4.9e-24 114.4 94 64.9
BcaB03g14649 Brassica carinata HOM05D000123 ORTHO05D000064 3.3e-12 75.1 63 63.5
BolC3t17547H Brassica oleracea HOM05D000123 ORTHO05D000064 2.2e-11 72.4 69 56.5
BraA05t21477Z Brassica rapa HOM05D000123 ORTHO05D000064 1.4e-10 69.7 131 37.4
CARHR098690 Cardamine hirsuta HOM05D000123 ORTHO05D000064 1.4e-10 69.7 110 40.9
Sp3g20530 Schrenkiella parvula HOM05D000123 ORTHO05D000064 1.8e-10 69.3 97 44.3
BcaB06g26397 Brassica carinata HOM05D000123 ORTHO05D000064 9.0e-10 67.0 128 35.9
BcaC05g28013 Brassica carinata HOM05D000123 ORTHO05D000064 9.0e-10 67.0 129 35.7
C05p40280 Brassica napus HOM05D000123 ORTHO05D000064 9.0e-10 67.0 129 35.7
BolC5t32770H Brassica oleracea HOM05D000123 ORTHO05D000064 9.0e-10 67.0 129 35.7
Carub.0003s2296 Capsella rubella HOM05D000123 ORTHO05D000064 2.2e-08 62.4 92 42.4
A05p25900 Brassica napus HOM05D000123 ORTHO05D000064 3.8e-08 61.6 132 36.4
AL3G37150 Arabidopsis lyrata HOM05D000123 ORTHO05D000064 6.5e-08 60.8 96 40.6
A01p32360 Brassica napus HOM05D000123 ORTHO05D000064 4.2e-07 58.2 97 43.3
BraA01t03362Z Brassica rapa HOM05D000123 ORTHO05D000064 4.2e-07 58.2 97 43.3
Thhalv10020829m.g Eutrema salsugineum HOM05D000123 ORTHO05D000064 4.2e-07 58.2 101 38.6
BcaC09g49209 Brassica carinata HOM05D000123 ORTHO05D000064 5.5e-07 57.8 101 42.6
C01p41370 Brassica napus HOM05D000123 ORTHO05D000064 5.5e-07 57.8 101 42.6
BolC1t04096H Brassica oleracea HOM05D000123 ORTHO05D000064 5.5e-07 57.8 101 42.6
AT3G22830 Arabidopsis thaliana HOM05D000123 ORTHO05D000064 7.9e-06 53.9 97 38.1
BcaB04g20494 Brassica carinata HOM05D000123 ORTHO05D000064 7.9e-06 53.9 97 41.2
QL06p000987 Quercus lobata HOM05D000123 ORTHO05D000064 7.9e-06 53.9 83 37.3


User provided reference genes

Program Settings