Gene: AT3G22830

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G22830
  • Transcript Identifier AT3G22830.1
  • Gene Type Coding gene
  • Location Chr3 : 8078981-8080895 : positive

Gene Family Information

  • ID HOM05D000123
  • #Genes/#Species 2785/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G22830.1
  • symbol HSFA6B
  • Alias AT-HSFA6B,ARABIDOPSIS THALIANA HEAT SHOCK TRANSCRIPTION FACTOR A6B
  • full_name heat shock transcription factor A6B
  • uniprot Q9LUH8

Descriptions

  • Description heat shock transcription factor A6B
  • Computational description heat shock transcription factor A6B (HSFA6B); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A2 (TAIR:AT2G26150.1); Has 2517 Blast hits to 2494 proteins in 242 species: Archae - 0; Bacteria - 17; Metazoa - 509; Fungi - 485; Plants - 797; Viruses - 4; Other Eukaryotes - 705 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation Solyc08g062960.4
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
ISS
Gene Ontologyregulation of transcription, DNA-templated1
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0006357
IBA
Gene Ontologyregulation of transcription by RNA polymerase II2
GO:0034605
IBA
Gene Ontologycellular response to heat2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding Os10g0419300
GO:0043565
IEA
GOA Databasesequence-specific DNA binding
GO:0043565
IEA
InterProsequence-specific DNA binding
GO:0003700
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0003700
ISS, IBA
Gene OntologyDNA-binding transcription factor activity1 2
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0000978
IBA
Gene OntologyRNA polymerase II cis-regulatory region sequence-specific DNA binding2
GO:0000976
IPI
Gene Ontologytranscription cis-regulatory region binding3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus2
GO:0005737
IEA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000232 Heat shock factor (HSF)-type, DNA-binding
IPR027725 Heat shock transcription factor family
IPR036390 Winged helix DNA-binding domain superfamily
IPR036388 Winged helix-like DNA-binding domain superfamily
Mapman id Description
15.5.13 RNA biosynthesis.transcriptional regulation.transcription factor (HSF)