Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g03276 Brassica carinata HOM05D000123 ORTHO05D000064 2.4e-31 138.3 72 100.0
BcaC01g03278 Brassica carinata HOM05D000123 ORTHO05D000064 2.4e-31 138.3 72 100.0
BolC3t17698H Brassica oleracea HOM05D000123 ORTHO05D000064 2.4e-31 138.3 72 100.0
C03p54050 Brassica napus HOM05D000123 ORTHO05D000064 7.6e-30 133.3 72 97.2
BcaB03g14579 Brassica carinata HOM05D000123 ORTHO05D000064 4.3e-25 117.5 72 86.1
A03p43780 Brassica napus HOM05D000123 ORTHO05D000064 4.3e-25 117.5 72 87.5
BraA03t13513Z Brassica rapa HOM05D000123 ORTHO05D000064 4.3e-25 117.5 73 90.4
A07p07800 Brassica napus HOM05D000123 ORTHO05D000064 1.3e-24 115.9 67 92.5
BraA07t28571Z Brassica rapa HOM05D000123 ORTHO05D000064 2.8e-24 114.8 67 91.0
Thhalv10002872m.g Eutrema salsugineum HOM05D000123 ORTHO05D000064 1.1e-23 112.8 75 84.0
BcaC06g35718 Brassica carinata HOM05D000123 ORTHO05D000064 6.9e-23 110.2 67 88.1
C07p11710 Brassica napus HOM05D000123 ORTHO05D000064 6.9e-23 110.2 67 88.1
BolC7t41645H Brassica oleracea HOM05D000123 ORTHO05D000064 6.9e-23 110.2 67 88.1
BcaB06g26653 Brassica carinata HOM05D000123 ORTHO05D000064 7.6e-22 106.7 67 86.6
Sp3g22310 Schrenkiella parvula HOM05D000123 ORTHO05D000064 8.4e-21 103.2 74 79.7
SpUn0226_0010 Schrenkiella parvula HOM05D000123 ORTHO05D000064 8.4e-21 103.2 74 79.7
AT3G24520 Arabidopsis thaliana HOM05D000123 ORTHO05D000064 9.3e-20 99.8 75 77.3
CARHR100660 Cardamine hirsuta HOM05D000123 ORTHO05D000064 2.5e-17 91.7 70 74.3
AL3G40060 Arabidopsis lyrata HOM05D000123 ORTHO05D000064 2.6e-14 81.6 79 64.6
Carub.0003s2491 Capsella rubella HOM05D000123 ORTHO05D000064 1.9e-12 75.5 76 68.4
Aa31sc29G90 Aethionema arabicum HOM05D000123 ORTHO05D000064 2.3e-10 68.6 73 61.6
THA.LOC104804588 Tarenaya hassleriana HOM05D000123 ORTHO05D000064 2.5e-09 65.1 67 61.2
THA.LOC104808761 Tarenaya hassleriana HOM05D000123 ORTHO05D000064 6.9e-07 57.0 66 56.1


User provided reference genes

Program Settings