Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g02578 Brassica carinata HOM05D000510 ORTHO05D006942 7.5e-79 297.0 135 100.0
Sp5g03720 Schrenkiella parvula HOM05D000510 ORTHO05D006942 1.9e-37 159.5 90 81.1
Thhalv10005780m.g Eutrema salsugineum HOM05D000510 ORTHO05D006942 1.2e-36 156.8 89 78.7
CARHR169820 Cardamine hirsuta HOM05D000510 ORTHO05D006942 3.5e-36 155.2 89 77.5
Carub.0005s2616 Capsella rubella HOM05D000510 ORTHO05D006942 6.2e-33 144.4 89 74.2
AT3G59420 Arabidopsis thaliana HOM05D000510 ORTHO05D006942 1.4e-32 143.3 91 71.4
BcaC07g40283 Brassica carinata HOM05D000510 ORTHO05D006942 1.8e-32 142.9 89 75.3
A09p51700 Brassica napus HOM05D000510 ORTHO05D006942 1.8e-32 142.9 89 75.3
C08p34430 Brassica napus HOM05D000510 ORTHO05D006942 1.8e-32 142.9 89 75.3
BolC8t51044H Brassica oleracea HOM05D000510 ORTHO05D006942 1.8e-32 142.9 89 75.3
BraA09t40606Z Brassica rapa HOM05D000510 ORTHO05D006942 1.8e-32 142.9 89 75.3
Aa31LG10G13780 Aethionema arabicum HOM05D000510 ORTHO05D006942 4.0e-32 141.7 94 68.1
AL5G41330 Arabidopsis lyrata HOM05D000510 ORTHO05D006942 5.2e-32 141.4 91 69.2
Aa31LG1G25120 Aethionema arabicum HOM05D009929 ORTHO05D006942 6.9e-32 141.0 89 71.9
THA.LOC104803720 Tarenaya hassleriana HOM05D000510 ORTHO05D006942 4.2e-29 131.7 89 68.5
Cc03_g12920 Coffea canephora HOM05D000510 ORTHO05D006942 4.6e-28 128.3 93 61.3
ClCG07G015670 Citrullus lanatus HOM05D000510 ORTHO05D006942 7.8e-28 127.5 89 62.9
Cfa015170 Carpinus fangiana HOM05D000510 ORTHO05D006942 1.3e-27 126.7 89 62.9
Haze_01505 Corylus avellana HOM05D000510 ORTHO05D006942 1.3e-27 126.7 89 62.9
CsaV3_4G003440 Cucumis sativus L. HOM05D000510 ORTHO05D006942 1.3e-27 126.7 89 62.9
MELO3C017714.2 Cucumis melo HOM05D000510 ORTHO05D006942 1.7e-27 126.3 89 62.9
CiPaw.01G100000 Carya illinoinensis HOM05D000510 ORTHO05D006942 2.3e-27 125.9 89 62.9
Ciclev10018759m.g Citrus clementina HOM05D000510 ORTHO05D006942 2.3e-27 125.9 89 61.8
QL10p048845 Quercus lobata HOM05D000510 ORTHO05D006942 2.3e-27 125.9 93 60.2
Thecc.04G179600 Theobroma cacao HOM05D000510 ORTHO05D006942 2.3e-27 125.9 89 62.9
Ca_20788_v3 Cicer arietinum L. HOM05D000510 ORTHO05D006942 3.0e-27 125.6 89 61.8
Duzib268G1091 Durio zibethinus HOM05D000510 ORTHO05D006942 3.0e-27 125.6 89 60.7
Atru.chr3.1485 Acer truncatum HOM05D000510 ORTHO05D006942 3.9e-27 125.2 89 61.8
Manes.11G120900 Manihot esculenta HOM05D000510 ORTHO05D006942 8.7e-27 124.0 89 60.7
Gohir.A10G137500 Gossypium hirsutum HOM05D000510 ORTHO05D006942 1.1e-26 123.6 89 60.7
Gohir.D10G129101 Gossypium hirsutum HOM05D000510 ORTHO05D006942 1.1e-26 123.6 89 60.7
Gorai.011G142500 Gossypium raimondii HOM05D000510 ORTHO05D006942 1.1e-26 123.6 89 60.7
Rhsim02G0077100 Rhododendron simsii HOM05D000510 ORTHO05D006942 1.1e-26 123.6 89 60.7
Sed0007298 Sechium edule HOM05D000510 ORTHO05D006942 1.1e-26 123.6 89 61.8
Ca_01257_v3 Cicer arietinum L. HOM05D000510 ORTHO05D006942 1.5e-26 123.2 89 60.7
CANSAT78G1007 Cannabis sativa HOM05D000510 ORTHO05D006942 1.9e-26 122.9 89 57.3
Lj3g0024373 Lotus japonicus HOM05D000510 ORTHO05D006942 1.9e-26 122.9 89 60.7
Lalb_Chr24g0396841 Lupinus albus HOM05D000510 ORTHO05D006942 1.9e-26 122.9 89 60.7
MD04G1040500 Malus domestica HOM05D000510 ORTHO05D006942 1.9e-26 122.9 89 59.6
Actinidia39849 Actinidia chinensis HOM05D000510 ORTHO05D006942 2.5e-26 122.5 89 59.6
Duzib151G0818 Durio zibethinus HOM05D000510 ORTHO05D006942 2.5e-26 122.5 89 60.7
COL.COLO4_07666 Corchorus olitorius HOM05D000510 ORTHO05D006942 3.3e-26 122.1 89 59.6
Sed0016530 Sechium edule HOM05D000510 ORTHO05D006942 3.3e-26 122.1 89 58.4
Cpa.g.sc9.282 Carica papaya HOM05D000510 ORTHO05D006942 4.3e-26 121.7 89 59.6
Glyma.13G344400 Glycine max HOM05D000510 ORTHO05D006942 4.3e-26 121.7 89 57.3
Glyma.15G030000 Glycine max HOM05D000510 ORTHO05D006942 4.3e-26 121.7 89 57.3
TWI63G1594 Tripterygium wilfordii HOM05D000510 ORTHO05D006942 4.3e-26 121.7 89 58.4
Lalb_Chr14g0372471 Lupinus albus HOM05D000510 ORTHO05D006942 5.6e-26 121.3 89 60.7
GSVIVG01010759001 Vitis vinifera HOM05D000510 ORTHO05D006942 7.3e-26 120.9 89 60.7
Actinidia11302 Actinidia chinensis HOM05D000510 ORTHO05D006942 9.6e-26 120.6 89 59.6
FvH4_4g10810 Fragaria vesca HOM05D000510 ORTHO05D006942 9.6e-26 120.6 89 59.6
FAN07G1914 Fragaria x ananassa HOM05D000510 ORTHO05D006942 9.6e-26 120.6 89 59.6
FAN12G3624 Fragaria x ananassa HOM05D000510 ORTHO05D006942 9.6e-26 120.6 89 59.6
FAN17G2837 Fragaria x ananassa HOM05D000510 ORTHO05D006942 9.6e-26 120.6 89 59.6
Phvul.011G054300 Phaseolus vulgaris HOM05D000510 ORTHO05D006942 9.6e-26 120.6 89 58.4
Glyma.12G052300 Glycine max HOM05D000510 ORTHO05D006942 1.6e-25 119.8 89 58.4
Lj6C53G4 Lonicera japonica HOM05D000510 ORTHO05D006942 1.6e-25 119.8 89 57.3
VMungo1080G1377 Vigna mungo HOM05D000510 ORTHO05D006942 2.1e-25 119.4 89 56.2
Phvul.005G153100 Phaseolus vulgaris HOM05D000510 ORTHO05D006942 2.8e-25 119.0 89 56.2
TPR.G18847 Trifolium pratense HOM05D000510 ORTHO05D006942 2.8e-25 119.0 89 58.4
Peaxi162Scf00126g00012 Petunia axillaris HOM05D000510 ORTHO05D006942 3.6e-25 118.6 89 59.6
Psat5g289200 Pisum sativum HOM05D000510 ORTHO05D006942 4.8e-25 118.2 89 58.4
Medtr2g098910 Medicago truncatula HOM05D000510 ORTHO05D006942 6.2e-25 117.9 89 58.4
THA.LOC104802310 Tarenaya hassleriana HOM05D000510 ORTHO05D006942 8.1e-25 117.5 89 61.8
CSS0000147 Camellia sinensis var. sinensis HOM05D000510 ORTHO05D006942 1.4e-24 116.7 91 58.2
CSS0036325 Camellia sinensis var. sinensis HOM05D000510 ORTHO05D006942 1.4e-24 116.7 91 58.2
Oeu012284.1 Olea europaea HOM05D000510 ORTHO05D006942 1.4e-24 116.7 89 56.2
Medtr4g067230 Medicago truncatula HOM05D000510 ORTHO05D006942 1.8e-24 116.3 89 56.2
RcHm_v2.0_Chr4g0406691 Rosa chinensis HOM05D000510 ORTHO05D006942 2.4e-24 115.9 89 57.3
arahy.Tifrunner.gnm1.ann1.HN1IYU Arachis hypogaea HOM05D000510 ORTHO05D006942 3.1e-24 115.5 89 56.2
CAN.G451.1 Capsicum annuum HOM05D000510 ORTHO05D006942 3.1e-24 115.5 87 58.6
Nitab4.5_0004047g0060 Nicotiana tabacum HOM05D000510 ORTHO05D006942 3.1e-24 115.5 87 58.6
Sabra17G0019300 Salix brachista HOM05D000510 ORTHO05D006942 3.1e-24 115.5 89 56.2
arahy.Tifrunner.gnm1.ann1.Z5KWA0 Arachis hypogaea HOM05D000510 ORTHO05D006942 4.0e-24 115.2 89 56.2
Potri.017G029900 Populus trichocarpa HOM05D000510 ORTHO05D006942 4.0e-24 115.2 89 56.2
VMungo1127G0022 Vigna mungo HOM05D000510 ORTHO05D006942 4.0e-24 115.2 89 56.2
Migut.B00097 Erythranthe guttata HOM05D000510 ORTHO05D006942 5.3e-24 114.8 89 58.4
Glyma.11G127700 Glycine max HOM05D000510 ORTHO05D006942 5.3e-24 114.8 89 56.2
Potri.007G128400 Populus trichocarpa HOM05D000510 ORTHO05D006942 5.3e-24 114.8 89 57.3
PGR083G2844 Punica granatum HOM05D000510 ORTHO05D006942 5.3e-24 114.8 93 54.8
Solyc11g044940.1 Solanum lycopersicum HOM05D000510 ORTHO05D006942 5.3e-24 114.8 87 57.5
PGSC0003DMG400006667 Solanum tuberosum HOM05D000510 ORTHO05D006942 5.3e-24 114.8 87 57.5
Nitab4.5_0002474g0030 Nicotiana tabacum HOM05D000510 ORTHO05D006942 6.9e-24 114.4 87 58.6
Sopen11g020450 Solanum pennellii HOM05D000510 ORTHO05D006942 6.9e-24 114.4 87 57.5
Oeu008316.1 Olea europaea HOM05D000510 ORTHO05D006942 9.0e-24 114.0 87 55.2
HanXRQChr03g0091111 Helianthus annuus HOM05D000510 ORTHO05D006942 1.2e-23 113.6 87 59.8
EL10Ac3g05942 Beta vulgaris HOM05D000510 ORTHO05D006942 1.5e-23 113.2 89 56.2
Eucgr.A00082 Eucalyptus grandis HOM05D000510 ORTHO05D006942 1.5e-23 113.2 89 57.3
Oeu055655.1 Olea europaea HOM05D000510 ORTHO05D006942 1.5e-23 113.2 89 56.2
Psat7g214960 Pisum sativum HOM05D000510 ORTHO05D006942 1.5e-23 113.2 89 58.4
ECA240G0569 Erigeron canadensis HOM05D000510 ORTHO05D006942 2.0e-23 112.8 93 57.0
Sabra07G0104900 Salix brachista HOM05D000510 ORTHO05D006942 2.0e-23 112.8 89 56.2
Sc13g0006770 Simmondsia chinensis HOM05D000510 ORTHO05D006942 9.9e-23 110.5 89 56.2
Ah.15g099620 Amaranthus hybridus HOM05D000510 ORTHO05D006942 2.2e-22 109.4 89 55.1
AUR62015382 Chenopodium quinoa HOM05D000510 ORTHO05D006942 2.2e-22 109.4 89 55.1
TPR.G34184 Trifolium pratense HOM05D000510 ORTHO05D006942 2.2e-22 109.4 89 53.9
arahy.Tifrunner.gnm1.ann1.VC2WT3 Arachis hypogaea HOM05D000510 ORTHO05D006942 4.9e-22 108.2 91 56.0
AUR62002308 Chenopodium quinoa HOM05D000510 ORTHO05D006942 6.4e-22 107.8 89 53.9
PSO675G3025 Papaver somniferum HOM05D000510 ORTHO05D006942 8.4e-22 107.5 89 53.9
DCAR_028458 Daucus carota HOM05D000510 ORTHO05D006942 1.1e-21 107.1 93 53.8
PSO017G6430 Papaver somniferum HOM05D000510 ORTHO05D006942 1.9e-21 106.3 89 52.8
SHI26082 Sapria himalayana HOM05D000510 ORTHO05D006942 7.1e-21 104.4 89 49.4
TAR362G0688 Trochodendron aralioides HOM05D000510 ORTHO05D006942 7.1e-21 104.4 89 53.9
TAR633G2069 Trochodendron aralioides HOM05D000510 ORTHO05D006942 7.1e-21 104.4 89 52.8
MSTRG.27653 Avicennia marina HOM05D000510 ORTHO05D006942 9.3e-21 104.0 89 53.9
Nn1g09631 Nelumbo nucifera HOM05D000510 ORTHO05D006942 9.3e-21 104.0 89 52.8
CDE08G0362 Ceratophyllum demersum HOM05D000510 ORTHO05D006942 2.1e-20 102.8 89 52.8
Lsat_1_v5_gn_3_115521 Lactuca sativa HOM05D000510 ORTHO05D006942 3.5e-20 102.1 93 50.5
Ah.13g072870 Amaranthus hybridus HOM05D019857 ORTHO05D006942 1.8e-19 99.8 89 50.6
SGA_v2.0_scaffold58G20401 Striga asiatica HOM05D000510 ORTHO05D006942 3.0e-19 99.0 89 52.8
Aqoxy2G04122 Aquilegia oxysepala HOM05D000510 ORTHO05D006942 3.9e-19 98.6 89 49.4
MBI11_g04862_MAGBIO Magnolia biondii HOM05D000510 ORTHO05D006942 1.1e-18 97.1 89 47.2
Zm00001eb406780 Zea mays HOM05D000510 ORTHO05D006942 1.5e-18 96.7 89 47.2
unitig_26.g9999 Utricularia gibba HOM05D000510 ORTHO05D006942 1.9e-18 96.3 89 50.6
Os03g0637800 Oryza sativa ssp. japonica HOM05D000510 ORTHO05D006942 4.8e-17 91.7 89 47.2
ATR0824G045 Amborella trichopoda HOM05D000510 ORTHO05D006942 4.5e-15 85.1 105 44.8
Prupe.1G194300 Prunus persica HOM05D000510 ORTHO05D006942 2.2e-14 82.8 89 44.9
Mapoly0064s0097 Marchantia polymorpha HOM05D000510 ORTHO05D006942 2.3e-11 72.8 99 36.4
HPP92_023712 Vanilla planifolia HOM05D000510 ORTHO05D006942 1.5e-10 70.1 70 48.6
Pp3c6_19970 Physcomitrium patens HOM05D000510 ORTHO05D006942 2.5e-10 69.3 89 39.3
MBI08_g14949_MAGBIO Magnolia biondii HOM05D000510 ORTHO05D006942 1.4e-08 63.5 89 37.1
Dinv44189 Davidia involucrata HOM05D000510 ORTHO05D006942 6.9e-08 61.2 44 61.4
MBI18_g25928_MAGBIO Magnolia biondii HOM05D000008 ORTHO05D006942 2.6e-07 59.3 37 64.9
MBI10_g04881_MAGBIO Magnolia biondii HOM05D000510 ORTHO05D006942 4.5e-07 58.5 65 44.6


User provided reference genes

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