Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g02428 Brassica carinata HOM05D004753 ORTHO05D005920 1.1e-182 643.3 343 100.0
C03p65390 Brassica napus HOM05D004753 ORTHO05D005920 1.1e-182 643.3 343 100.0
BolC3t18792H Brassica oleracea HOM05D004753 ORTHO05D005920 1.1e-182 643.3 343 100.0
A06p28420 Brassica napus HOM05D004753 ORTHO05D005920 4.2e-179 631.3 344 98.5
BraA06t25786Z Brassica rapa HOM05D004753 ORTHO05D005920 4.2e-179 631.3 344 98.5
BcaB02g09600 Brassica carinata HOM05D004753 ORTHO05D005920 1.4e-169 599.7 317 97.5
C09p08350 Brassica napus HOM05D004753 ORTHO05D005920 3.9e-164 581.6 348 90.8
BolC9t53745H Brassica oleracea HOM05D004753 ORTHO05D005920 3.9e-164 581.6 348 90.8
BcaC04g23436 Brassica carinata HOM05D004753 ORTHO05D005920 5.6e-163 577.8 356 89.0
BraA09t36398Z Brassica rapa HOM05D004753 ORTHO05D005920 1.2e-160 570.1 348 89.4
A09p07440 Brassica napus HOM05D004753 ORTHO05D005920 1.5e-160 569.7 348 89.4
Sp2g24970 Schrenkiella parvula HOM05D004753 ORTHO05D005920 9.8e-160 567.0 315 91.7
Thhalv10004503m.g Eutrema salsugineum HOM05D004753 ORTHO05D005920 2.2e-159 565.8 318 90.9
CARHR275530 Cardamine hirsuta HOM05D004753 ORTHO05D005920 2.7e-157 558.9 314 90.4
Carub.0008s2246 Capsella rubella HOM05D004753 ORTHO05D005920 3.5e-157 558.5 309 91.3
AL8G38530 Arabidopsis lyrata HOM05D004753 ORTHO05D005920 1.7e-156 556.2 318 89.3
AT5G61770 Arabidopsis thaliana HOM05D004753 ORTHO05D005920 7.3e-155 550.8 312 89.7
BcaNung01420 Brassica carinata HOM05D004753 ORTHO05D005920 2.1e-154 549.3 333 86.2
Aa31LG11G1720 Aethionema arabicum HOM05D004753 ORTHO05D005920 1.2e-144 516.9 328 82.0
THA.LOC104818291 Tarenaya hassleriana HOM05D004753 ORTHO05D005920 4.2e-142 508.4 313 81.2
CiPaw.14G100000 Carya illinoinensis HOM05D004753 ORTHO05D005920 7.1e-142 507.7 317 79.8
QL12p028506 Quercus lobata HOM05D004753 ORTHO05D005920 6.0e-141 504.6 316 78.8
Haze_24929 Corylus avellana HOM05D004753 ORTHO05D005920 7.8e-141 504.2 346 75.1
MD11G1310300 Malus domestica HOM05D004753 ORTHO05D005920 1.3e-140 503.4 317 79.5
QL09p032163 Quercus lobata HOM05D004753 ORTHO05D005920 2.3e-140 502.7 318 78.3
MD03G1288000 Malus domestica HOM05D004753 ORTHO05D005920 3.9e-140 501.9 318 78.6
ClCG10G010920 Citrullus lanatus HOM05D004753 ORTHO05D005920 3.3e-139 498.8 313 81.2
Haze_04935 Corylus avellana HOM05D004753 ORTHO05D005920 9.6e-139 497.3 323 78.0
MELO3C017956.2 Cucumis melo HOM05D004753 ORTHO05D005920 2.1e-138 496.1 338 77.2
Manes.01G218800 Manihot esculenta HOM05D004753 ORTHO05D005920 3.6e-138 495.4 316 78.2
Cpa.g.sc16.169 Carica papaya HOM05D004753 ORTHO05D005920 1.4e-137 493.4 316 77.5
CsaV3_4G000800 Cucumis sativus L. HOM05D004753 ORTHO05D005920 1.8e-137 493.0 323 78.3
Potri.002G204900 Populus trichocarpa HOM05D004753 ORTHO05D005920 3.1e-137 492.3 320 76.9
CANSAT54G1658 Cannabis sativa HOM05D004753 ORTHO05D005920 5.3e-137 491.5 309 79.3
Sabra02G0154600 Salix brachista HOM05D004753 ORTHO05D005920 6.9e-137 491.1 313 78.0
Cc09_g07750 Coffea canephora HOM05D004753 ORTHO05D005920 9.0e-137 490.7 313 79.6
Sabra14G0096300 Salix brachista HOM05D004753 ORTHO05D005920 2.0e-136 489.6 326 75.8
GSVIVG01028012001 Vitis vinifera HOM05D004753 ORTHO05D005920 2.0e-136 489.6 342 73.4
CSS0011058 Camellia sinensis var. sinensis HOM05D004753 ORTHO05D005920 2.6e-136 489.2 304 78.6
PGR044G2668 Punica granatum HOM05D004753 ORTHO05D005920 3.4e-136 488.8 324 76.5
Ciclev10023300m.g Citrus clementina HOM05D004753 ORTHO05D005920 5.8e-136 488.0 309 80.3
Nn3g21484 Nelumbo nucifera HOM05D004753 ORTHO05D005920 5.8e-136 488.0 324 77.2
Potri.014G129700 Populus trichocarpa HOM05D004753 ORTHO05D005920 1.7e-135 486.5 327 75.5
Lsat_1_v5_gn_4_87281 Lactuca sativa HOM05D004753 ORTHO05D005920 1.1e-134 483.8 312 78.2
Eucgr.K03479 Eucalyptus grandis HOM05D004753 ORTHO05D005920 1.4e-134 483.4 320 76.6
Sed0000474 Sechium edule HOM05D004753 ORTHO05D005920 3.2e-134 482.3 313 78.3
TAR636G3371 Trochodendron aralioides HOM05D004753 ORTHO05D005920 5.4e-134 481.5 313 76.4
Atru.chr5.901 Acer truncatum HOM05D004753 ORTHO05D005920 1.6e-133 479.9 326 75.5
Oeu046682.2 Olea europaea HOM05D004753 ORTHO05D005920 1.6e-133 479.9 318 76.7
Lj2A1194G52 Lonicera japonica HOM05D004753 ORTHO05D005920 6.0e-133 478.0 302 78.5
ECA238G0492 Erigeron canadensis HOM05D004753 ORTHO05D005920 7.8e-133 477.6 317 75.4
vmacro15009 Vaccinium macrocarpon HOM05D004753 ORTHO05D005920 1.3e-132 476.9 312 76.3
Thecc.01G300100 Theobroma cacao HOM05D004753 ORTHO05D005920 1.7e-132 476.5 328 74.7
MSTRG.18152 Avicennia marina HOM05D004753 ORTHO05D005920 3.0e-132 475.7 318 76.7
Peaxi162Scf01084g00120 Petunia axillaris HOM05D004753 ORTHO05D005920 3.0e-132 475.7 318 76.4
Duzib138G1754 Durio zibethinus HOM05D004753 ORTHO05D005920 5.1e-132 474.9 326 74.5
Oeu011458.1 Olea europaea HOM05D004753 ORTHO05D005920 1.1e-131 473.8 318 76.1
MBI18_g06877_MAGBIO Magnolia biondii HOM05D004753 ORTHO05D005920 2.5e-131 472.6 318 74.5
Aqoxy2G02947 Aquilegia oxysepala HOM05D004753 ORTHO05D005920 3.3e-131 472.2 318 74.5
COL.COLO4_23348 Corchorus olitorius HOM05D004753 ORTHO05D005920 4.3e-131 471.9 332 73.2
Gohir.D08G138800 Gossypium hirsutum HOM05D004753 ORTHO05D005920 7.3e-131 471.1 320 75.3
HanXRQChr08g0207921 Helianthus annuus HOM05D004753 ORTHO05D005920 7.3e-131 471.1 300 79.0
DCAR_012396 Daucus carota HOM05D004753 ORTHO05D005920 9.6e-131 470.7 310 75.2
TWI59G0801 Tripterygium wilfordii HOM05D004753 ORTHO05D005920 9.6e-131 470.7 318 74.8
PGSC0003DMG401027528 Solanum tuberosum HOM05D004753 ORTHO05D005920 1.3e-130 470.3 318 75.5
SGA_v2.0_scaffold2G01394 Striga asiatica HOM05D004753 ORTHO05D005920 1.3e-130 470.3 316 75.9
Duzib133G0229 Durio zibethinus HOM05D004753 ORTHO05D005920 1.6e-130 469.9 314 76.1
Gorai.004G142400 Gossypium raimondii HOM05D004753 ORTHO05D005920 1.6e-130 469.9 320 75.3
Hund05425 Selenicereus undatus HOM05D004753 ORTHO05D005920 3.6e-130 468.8 314 73.9
SalBow3G1002 Salvia bowleyana HOM05D004753 ORTHO05D005920 4.8e-130 468.4 324 74.7
Gohir.A08G117800 Gossypium hirsutum HOM05D004753 ORTHO05D005920 1.8e-129 466.5 311 75.9
Nitab4.5_0002687g0080 Nicotiana tabacum HOM05D004753 ORTHO05D005920 2.4e-129 466.1 318 74.8
Solyc01g096800.3 Solanum lycopersicum HOM05D004753 ORTHO05D005920 9.0e-129 464.2 318 73.9
Rhsim01G0243400 Rhododendron simsii HOM05D004753 ORTHO05D005920 1.5e-128 463.4 368 66.6
Sopen01g040500 Solanum pennellii HOM05D004753 ORTHO05D005920 4.5e-128 461.8 318 73.6
Nitab4.5_0008999g0010 Nicotiana tabacum HOM05D004753 ORTHO05D005920 6.4e-127 458.0 297 77.4
VMungo1127G1640 Vigna mungo HOM05D004753 ORTHO05D005920 6.4e-127 458.0 306 75.5
ATR0584G246 Amborella trichopoda HOM05D004753 ORTHO05D005920 5.4e-126 454.9 298 74.5
Glyma.12G026700 Glycine max HOM05D004753 ORTHO05D005920 5.4e-126 454.9 308 74.7
Lj3g0027269 Lotus japonicus HOM05D004753 ORTHO05D005920 9.3e-126 454.1 302 74.8
SGA_v2.0_scaffold1G00368 Striga asiatica HOM05D004753 ORTHO05D005920 1.2e-125 453.8 343 69.7
Sc17g0002740 Simmondsia chinensis HOM05D004753 ORTHO05D005920 1.6e-125 453.4 316 70.3
PSO017G3074 Papaver somniferum HOM05D004753 ORTHO05D005920 2.1e-125 453.0 313 73.8
CAN.G134.43 Capsicum annuum HOM05D004753 ORTHO05D005920 4.6e-125 451.8 313 73.8
Phvul.011G029700 Phaseolus vulgaris HOM05D004753 ORTHO05D005920 4.6e-125 451.8 290 76.9
AUR62008626 Chenopodium quinoa HOM05D004753 ORTHO05D005920 1.3e-124 450.3 304 73.0
PSO832G3876 Papaver somniferum HOM05D004753 ORTHO05D005920 1.8e-124 449.9 317 73.5
arahy.Tifrunner.gnm1.ann1.89EUFG Arachis hypogaea HOM05D004753 ORTHO05D005920 5.1e-124 448.4 317 71.3
PSO170G0569 Papaver somniferum HOM05D004753 ORTHO05D005920 5.1e-124 448.4 305 74.8
Ca_19020_v3 Cicer arietinum L. HOM05D004753 ORTHO05D005920 1.9e-123 446.4 296 74.7
Lalb_Chr01g0001441 Lupinus albus HOM05D004753 ORTHO05D005920 1.9e-123 446.4 319 71.8
arahy.Tifrunner.gnm1.ann1.B7L3V1 Arachis hypogaea HOM05D004753 ORTHO05D005920 3.3e-123 445.7 317 71.0
PSO210G3006 Papaver somniferum HOM05D004753 ORTHO05D005920 5.6e-123 444.9 313 73.2
Glyma.11G100700 Glycine max HOM05D004753 ORTHO05D005920 1.3e-122 443.7 329 71.7
HPP92_002997 Vanilla planifolia HOM05D004753 ORTHO05D005920 1.3e-122 443.7 302 71.5
FvH4_2g25700 Fragaria vesca HOM05D004753 ORTHO05D005920 2.4e-121 439.5 323 68.7
FAN24G0086 Fragaria x ananassa HOM05D004753 ORTHO05D005920 6.9e-121 438.0 323 68.4
RcHm_v2.0_Chr6g0293981 Rosa chinensis HOM05D004753 ORTHO05D005920 9.0e-121 437.6 325 67.7
TPR.G32348 Trifolium pratense HOM05D004753 ORTHO05D005920 9.0e-121 437.6 314 72.6
FAN15G2487 Fragaria x ananassa HOM05D004753 ORTHO05D005920 2.9e-119 432.6 328 67.4
HanXRQChr12g0368811 Helianthus annuus HOM05D004753 ORTHO05D005920 2.9e-119 432.6 302 73.5
Actinidia15830 Actinidia chinensis HOM05D004753 ORTHO05D005920 8.4e-119 431.0 310 72.3
FAN27G0535 Fragaria x ananassa HOM05D004753 ORTHO05D005920 1.1e-118 430.6 328 67.1
FAN20G2170 Fragaria x ananassa HOM05D004753 ORTHO05D005920 1.2e-117 427.2 318 67.9
Dinv37873 Davidia involucrata HOM05D004753 ORTHO05D005920 1.3e-114 417.2 266 77.1
unitig_26.g10170 Utricularia gibba HOM05D004753 ORTHO05D005920 2.1e-114 416.4 266 77.1
AUR62033145 Chenopodium quinoa HOM05D004753 ORTHO05D005920 1.0e-111 407.5 304 68.1
Ah.08g213470 Amaranthus hybridus HOM05D004753 ORTHO05D005920 1.4e-110 403.7 323 64.7
Ah.15g093220 Amaranthus hybridus HOM05D004753 ORTHO05D005920 5.7e-107 391.7 307 66.1
Prupe.8G261200 Prunus persica HOM05D004753 ORTHO05D005920 3.0e-100 369.4 232 78.4
Os03g0343700 Oryza sativa ssp. japonica HOM05D004753 ORTHO05D005920 1.1e-99 367.5 320 57.5
SMO331G0088 Selaginella moellendorffii HOM05D004753 ORTHO05D005920 1.3e-98 364.0 283 61.8
CDE09G1083 Ceratophyllum demersum HOM05D004753 ORTHO05D005920 1.7e-98 363.6 257 70.0
Pp3c2_30030 Physcomitrium patens HOM05D004753 ORTHO05D005920 3.7e-98 362.5 302 58.3
TAR365G0243 Trochodendron aralioides HOM05D004753 ORTHO05D005920 2.4e-97 359.8 232 77.2
Zm00001eb016460 Zea mays HOM05D004753 ORTHO05D005920 2.0e-96 356.7 319 56.7
Medtr4g075050 Medicago truncatula HOM05D004753 ORTHO05D005920 5.0e-95 352.1 332 59.6
Gorai.002G117300 Gossypium raimondii HOM05D004753 ORTHO05D005920 1.9e-94 350.1 292 64.7
Aqoxy311s002 Aquilegia oxysepala HOM05D004753 ORTHO05D005920 1.6e-93 347.1 233 74.2
Psat7g177400 Pisum sativum HOM05D004753 ORTHO05D005920 7.9e-93 344.7 233 73.8
Mapoly0097s0041 Marchantia polymorpha HOM05D004753 ORTHO05D005920 2.3e-92 343.2 302 56.6
Actinidia01484 Actinidia chinensis HOM05D004753 ORTHO05D005920 5.1e-92 342.0 276 67.4
AagrBONN_evm.TU.Sc2ySwM_362.2675 Anthoceros agrestis HOM05D004753 ORTHO05D005920 9.7e-91 337.8 274 59.5
CBR_g227 Chara braunii HOM05D004753 ORTHO05D005920 8.2e-82 308.1 243 61.3
Actinidia32213 Actinidia chinensis HOM05D004753 ORTHO05D005920 3.7e-74 282.7 243 62.6
Cre10.g450879 Chlamydomonas reinhardtii HOM05D004753 ORTHO05D005920 5.0e-71 272.3 268 47.4
MCO08G191 Micromonas commoda HOM05D004753 ORTHO05D005920 6.5e-71 271.9 275 49.5
THA.LOC104801723 Tarenaya hassleriana HOM05D004753 ORTHO05D005920 6.3e-66 255.4 148 81.8
Sed0023746 Sechium edule HOM05D004753 ORTHO05D005920 1.6e-64 250.8 318 48.1
Gorai.012G092400 Gossypium raimondii HOM05D004753 ORTHO05D005920 5.0e-63 245.7 168 74.4
PRCOL_00006477 Prasinoderma coloniale HOM05D004753 ORTHO05D005920 5.4e-49 199.1 225 44.4
AUR62033152 Chenopodium quinoa HOM05D004753 ORTHO05D005920 2.3e-47 193.7 164 59.8
Migut.B01152 Erythranthe guttata HOM05D004753 ORTHO05D005920 2.2e-42 177.2 112 75.0
Cfa026076 Carpinus fangiana HOM05D004753 ORTHO05D005920 2.3e-39 167.2 384 32.8
Haze_27315 Corylus avellana HOM05D004753 ORTHO05D005920 5.1e-39 166.0 289 35.6
Gohir.D04G081932 Gossypium hirsutum HOM05D004753 ORTHO05D005920 2.1e-32 144.1 94 73.4
Gohir.D11G077800 Gossypium hirsutum HOM05D004753 ORTHO05D005920 3.5e-32 143.3 194 45.4
Gohir.D02G011800 Gossypium hirsutum HOM05D004753 ORTHO05D005920 6.0e-32 142.5 94 72.3
Gorai.005G015000 Gossypium raimondii HOM05D004753 ORTHO05D005920 6.0e-32 142.5 94 72.3
arahy.Tifrunner.gnm1.ann1.81M7HI Arachis hypogaea HOM05D004753 ORTHO05D005920 6.6e-31 139.0 114 66.7
arahy.Tifrunner.gnm1.ann1.JRXS1U Arachis hypogaea HOM05D004753 ORTHO05D005920 1.5e-30 137.9 95 74.7
MD08G1232400 Malus domestica HOM05D004753 ORTHO05D005920 3.6e-29 133.3 113 65.5
Actinidia16175 Actinidia chinensis HOM05D004753 ORTHO05D005920 2.9e-26 123.6 82 74.4
Gorai.007G256100 Gossypium raimondii HOM05D004753 ORTHO05D005920 1.1e-17 95.1 63 74.6
PGSC0003DMG400004411 Solanum tuberosum HOM05D004753 ORTHO05D005920 6.0e-16 89.4 53 79.2
TAR629G0138 Trochodendron aralioides HOM05D004753 ORTHO05D005920 1.1e-14 85.1 55 78.2
CANSAT21G1846 Cannabis sativa HOM05D000521 ORTHO05D000384 8.1e-13 79.0 50 74.0
Migut.D00217 Erythranthe guttata HOM05D004753 ORTHO05D005920 8.1e-13 79.0 95 50.5
TAR624G1091 Trochodendron aralioides HOM05D004877 ORTHO05D005942 8.1e-13 79.0 57 70.2
Hma1.2p1_1471F.1_g285675 Hydrangea macrophylla HOM05D004753 ORTHO05D005920 3.1e-12 77.0 48 75.0
Hma1.2p1_1471F.1_g285690 Hydrangea macrophylla HOM05D004753 ORTHO05D005920 3.1e-12 77.0 48 75.0
Gorai.004G103000 Gossypium raimondii HOM05D002536 ORTHO05D006290 1.8e-07 61.2 84 42.9


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