Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g02155 Brassica carinata HOM05D001285 ORTHO05D000199 3.5e-82 308.1 147 100.0
C03p68150 Brassica napus HOM05D001285 ORTHO05D000199 1.3e-65 253.1 142 88.7
BolC3t19036H Brassica oleracea HOM05D001285 ORTHO05D000199 1.3e-65 253.1 142 88.7
C03p68140 Brassica napus HOM05D001285 ORTHO05D000199 1.9e-59 232.6 138 85.5
BolC3t19035H Brassica oleracea HOM05D001285 ORTHO05D000199 1.9e-59 232.6 138 85.5
A06p22000 Brassica napus HOM05D001285 ORTHO05D000199 3.4e-53 211.8 153 68.6
A10p10700 Brassica napus HOM05D001285 ORTHO05D000199 7.7e-53 210.7 153 70.6
BcaB03g15494 Brassica carinata HOM05D001285 ORTHO05D000199 1.3e-52 209.9 153 69.3
C06p24190 Brassica napus HOM05D001285 ORTHO05D000199 1.3e-52 209.9 153 69.3
BcaB06g28698 Brassica carinata HOM05D001285 ORTHO05D000199 2.2e-52 209.1 153 69.3
BcaC03g17776 Brassica carinata HOM05D001285 ORTHO05D000199 2.2e-52 209.1 153 69.9
BolC2t11860H Brassica oleracea HOM05D001285 ORTHO05D000199 2.2e-52 209.1 153 69.9
BcaC03g14913 Brassica carinata HOM05D001285 ORTHO05D000199 3.8e-52 208.4 153 69.9
BolC2t10459H Brassica oleracea HOM05D001285 ORTHO05D000199 5.0e-52 208.0 155 67.7
BraA05t21432Z Brassica rapa HOM05D001285 ORTHO05D000199 8.5e-52 207.2 153 68.6
BcaC08g43423 Brassica carinata HOM05D001285 ORTHO05D000199 3.2e-51 205.3 153 68.6
BolC6t35851H Brassica oleracea HOM05D001285 ORTHO05D000199 3.2e-51 205.3 153 68.0
BraA09t37769Z Brassica rapa HOM05D001285 ORTHO05D000199 3.6e-50 201.8 153 67.3
C02p23920 Brassica napus HOM05D001285 ORTHO05D000199 4.4e-48 194.9 138 71.7
C02p57920 Brassica napus HOM05D001285 ORTHO05D000199 1.8e-46 189.5 138 70.3
BcaB01g00219 Brassica carinata HOM05D001285 ORTHO05D000199 1.4e-41 173.3 153 61.4
C03p68130 Brassica napus HOM05D001285 ORTHO05D000199 2.4e-38 162.5 107 77.6
BcaB03g15498 Brassica carinata HOM05D001285 ORTHO05D000199 2.7e-34 149.1 79 82.3
A02p36790 Brassica napus HOM05D001285 ORTHO05D000199 2.7e-34 149.1 154 51.3
BraA02t08671Z Brassica rapa HOM05D001285 ORTHO05D000199 2.7e-34 149.1 154 51.3
C02p49790 Brassica napus HOM05D001285 ORTHO05D000199 1.0e-33 147.1 153 48.4
BcaB08g35036 Brassica carinata HOM05D001285 ORTHO05D000199 1.8e-33 146.4 151 49.7
C01p48530 Brassica napus HOM05D001285 ORTHO05D000199 3.3e-32 142.1 151 49.0
C03p03120 Brassica napus HOM05D001285 ORTHO05D000199 7.5e-32 141.0 151 49.7
A09p21670 Brassica napus HOM05D001285 ORTHO05D000199 1.4e-30 136.7 115 62.6
BcaC04g20925 Brassica carinata HOM05D001285 ORTHO05D000199 1.8e-30 136.3 151 49.7
C06p15920 Brassica napus HOM05D001285 ORTHO05D000199 1.8e-30 136.3 151 47.7
BcaC02g10464 Brassica carinata HOM05D001285 ORTHO05D000199 3.1e-30 135.6 141 51.8
BcaC06g30937 Brassica carinata HOM05D001285 ORTHO05D000199 7.0e-30 134.4 155 45.8
BcaC07g41747 Brassica carinata HOM05D001285 ORTHO05D000199 9.1e-30 134.0 151 49.7
BcaC08g43217 Brassica carinata HOM05D001285 ORTHO05D000199 1.6e-29 133.3 151 49.0
BolC2t07252H Brassica oleracea HOM05D001285 ORTHO05D000199 2.0e-29 132.9 151 49.0
BcaC05g27865 Brassica carinata HOM05D001285 ORTHO05D000199 3.5e-29 132.1 151 47.7
BraA08t32912Z Brassica rapa HOM05D001285 ORTHO05D000199 3.5e-29 132.1 102 64.7
BraA09t38468Z Brassica rapa HOM05D001285 ORTHO05D000199 3.5e-29 132.1 151 47.7
BcaC03g15031 Brassica carinata HOM05D001285 ORTHO05D000199 4.5e-29 131.7 152 48.0
BcaB03g15497 Brassica carinata HOM05D001285 ORTHO05D000199 7.7e-29 131.0 114 58.8
BcaB03g16504 Brassica carinata HOM05D001285 ORTHO05D000199 7.7e-29 131.0 151 47.7
BcaB02g11283 Brassica carinata HOM05D001285 ORTHO05D000199 1.0e-28 130.6 138 53.6
BcaC05g27108 Brassica carinata HOM05D001285 ORTHO05D000199 1.3e-28 130.2 152 47.4
BraA03t11415Z Brassica rapa HOM05D001285 ORTHO05D000199 1.3e-28 130.2 151 47.7
BcaNung03065 Brassica carinata HOM05D001285 ORTHO05D000199 2.2e-28 129.4 151 47.0
BraA01t02157Z Brassica rapa HOM05D001285 ORTHO05D000199 5.0e-28 128.3 151 47.0
C02p29930 Brassica napus HOM05D001285 ORTHO05D000199 1.1e-27 127.1 162 43.2
BraA07t28518Z Brassica rapa HOM05D001285 ORTHO05D000199 3.2e-27 125.6 151 47.0
BcaB03g15573 Brassica carinata HOM05D001285 ORTHO05D000199 5.5e-27 124.8 148 45.9
BraA06t25595Z Brassica rapa HOM05D001285 ORTHO05D000199 3.6e-26 122.1 131 50.4
BraSC41t46221Z Brassica rapa HOM05D001285 ORTHO05D000199 6.1e-26 121.3 127 49.6
BolC9t59420H Brassica oleracea HOM05D001285 ORTHO05D000199 1.4e-25 120.2 139 45.3
C09p65970 Brassica napus HOM05D001285 ORTHO05D000199 2.3e-25 119.4 139 45.3
A10p12140 Brassica napus HOM05D001285 ORTHO05D000199 1.3e-23 113.6 95 65.3
A02p26990 Brassica napus HOM05D001285 ORTHO05D000199 2.2e-23 112.8 149 43.0
C05p19190 Brassica napus HOM05D001285 ORTHO05D000199 2.2e-23 112.8 153 40.5
BolC5t30619H Brassica oleracea HOM05D001285 ORTHO05D000199 2.2e-23 112.8 153 40.5
A02p24110 Brassica napus HOM05D001285 ORTHO05D000199 3.1e-22 109.0 127 47.2
A01p19020 Brassica napus HOM05D001285 ORTHO05D000199 5.4e-22 108.2 127 47.2
C02p25810 Brassica napus HOM05D001285 ORTHO05D000199 1.6e-21 106.7 127 47.2
C05p29930 Brassica napus HOM05D001285 ORTHO05D000199 1.6e-21 106.7 127 46.5
BcaB04g17599 Brassica carinata HOM05D001285 ORTHO05D000199 2.7e-21 105.9 116 47.4
BraA01t01846Z Brassica rapa HOM05D001285 ORTHO05D000199 1.3e-20 103.6 112 49.1
BcaC06g34326 Brassica carinata HOM05D001285 ORTHO05D000199 6.6e-20 101.3 115 47.8
BcaB01g01002 Brassica carinata HOM05D001285 ORTHO05D000199 8.6e-20 100.9 81 55.6
BcaC08g44579 Brassica carinata HOM05D001285 ORTHO05D000199 4.2e-19 98.6 151 40.4
BcaC07g38661 Brassica carinata HOM05D001285 ORTHO05D000199 1.2e-18 97.1 138 41.3
C02p37580 Brassica napus HOM05D001285 ORTHO05D015508 1.6e-18 96.7 79 58.2
BcaB06g25750 Brassica carinata HOM05D001285 ORTHO05D000199 3.6e-18 95.5 79 54.4
BcaC04g19281 Brassica carinata HOM05D001285 ORTHO05D000199 3.6e-18 95.5 74 54.1
C05p38640 Brassica napus HOM05D001285 ORTHO05D000199 3.6e-18 95.5 123 43.1
BolC9t56617H Brassica oleracea HOM05D001285 ORTHO05D000199 8.0e-18 94.4 81 55.6
BcaC03g15380 Brassica carinata HOM05D001285 ORTHO05D000199 1.4e-17 93.6 81 49.4
BolC4t23605H Brassica oleracea HOM05D001285 ORTHO05D000199 8.9e-17 90.9 121 38.8
BolC3t18090H Brassica oleracea HOM05D001285 ORTHO05D028153 2.0e-16 89.7 66 56.1
C07p30310 Brassica napus HOM05D001285 ORTHO05D000199 1.7e-15 86.7 78 53.8
Carub.0027s0004 Capsella rubella HOM05D001285 ORTHO05D000199 1.7e-15 86.7 155 34.2
BolC8t49093H Brassica oleracea HOM05D001285 ORTHO05D028153 3.7e-15 85.5 61 59.0
Carub.0004s0691 Capsella rubella HOM05D001285 ORTHO05D000199 3.7e-15 85.5 153 34.0
AL1G60090 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 8.3e-15 84.3 153 32.7
AL3G45900 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 8.3e-15 84.3 150 36.7
A02p26970 Brassica napus HOM05D001285 ORTHO05D028153 1.4e-14 83.6 66 53.0
BraA02t07710Z Brassica rapa HOM05D001285 ORTHO05D028153 1.4e-14 83.6 66 53.0
Carub.0003s3058 Capsella rubella HOM05D001285 ORTHO05D000199 2.4e-14 82.8 155 34.8
Thhalv10015545m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 2.4e-14 82.8 147 33.3
Thhalv10029511m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 4.1e-14 82.0 160 32.5
AL6G41380 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 7.0e-14 81.3 159 32.7
Thhalv10027292m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 7.0e-14 81.3 145 33.1
Thhalv10015902m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 9.2e-14 80.9 136 34.6
Carub.0005s0342 Capsella rubella HOM05D001285 ORTHO05D000199 1.2e-13 80.5 155 32.3
BcaB04g17928 Brassica carinata HOM05D001285 ORTHO05D000199 2.0e-13 79.7 68 54.4
Thhalv10019812m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 2.7e-13 79.3 160 31.2
BcaC05g30530 Brassica carinata HOM05D001285 ORTHO05D000199 3.5e-13 79.0 60 60.0
Thhalv10023182m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 3.5e-13 79.0 160 31.2
Thhalv10015990m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 4.5e-13 78.6 158 31.6
Thhalv10003114m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 1.0e-12 77.4 160 30.6
BcaC08g44187 Brassica carinata HOM05D001285 ORTHO05D000199 1.3e-12 77.0 113 38.1
AT5G28235 Arabidopsis thaliana HOM05D001285 ORTHO05D000199 1.7e-12 76.6 153 30.1
Thhalv10021955m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 1.7e-12 76.6 162 32.1
Thhalv10005571m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 3.8e-12 75.5 147 32.0
AL1G51180 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 6.6e-12 74.7 155 30.3
Sp1g37620 Schrenkiella parvula HOM05D001285 ORTHO05D000199 6.6e-12 74.7 73 46.6
AT4G08430 Arabidopsis thaliana HOM05D001285 ORTHO05D000199 8.6e-12 74.3 147 30.6
AL6G42160 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 1.1e-11 73.9 142 34.5
AT5G45570 Arabidopsis thaliana HOM05D001285 ORTHO05D000199 1.5e-11 73.6 147 30.6
Thhalv10002270m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 1.9e-11 73.2 157 33.1
BcaC05g25966 Brassica carinata HOM05D001285 ORTHO05D000199 3.3e-11 72.4 60 53.3
Thhalv10027106m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 1.6e-10 70.1 101 37.6
Carub.0261s0001 Capsella rubella HOM05D001285 ORTHO05D000199 4.7e-10 68.6 85 40.0
Thhalv10011096m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 6.1e-10 68.2 144 31.9
BcaC03g17060 Brassica carinata HOM05D001285 ORTHO05D000199 8.0e-10 67.8 51 54.9
BcaC05g28112 Brassica carinata HOM05D001285 ORTHO05D000199 1.0e-09 67.4 50 58.0
Thhalv10003101m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 1.0e-09 67.4 143 32.2
CARHR185190 Cardamine hirsuta HOM05D001285 ORTHO05D000199 3.1e-09 65.9 141 32.6
BcaC02g11078 Brassica carinata HOM05D001285 ORTHO05D000199 5.2e-09 65.1 112 32.1
CARHR117480 Cardamine hirsuta HOM05D001285 ORTHO05D000199 6.8e-09 64.7 85 41.2
Thhalv10005449m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 2.0e-08 63.2 144 28.5
Thhalv10023880m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 2.0e-08 63.2 120 32.5
CARHR033910 Cardamine hirsuta HOM05D001285 ORTHO05D000199 7.5e-08 61.2 142 30.3
CARHR153270 Cardamine hirsuta HOM05D001285 ORTHO05D000199 2.2e-07 59.7 123 32.5
BolC1t02405H Brassica oleracea HOM05D001285 ORTHO05D000199 2.9e-07 59.3 40 75.0
Sp3g26120 Schrenkiella parvula HOM05D001285 ORTHO05D015508 4.9e-07 58.5 104 35.6
CARHR150510 Cardamine hirsuta HOM05D001285 ORTHO05D000199 4.1e-06 55.5 76 39.5


User provided reference genes

Program Settings