Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g36970 Brassica carinata HOM05D004649 ORTHO05D005446 8.5e-238 826.6 423 100.0
BcaC04g19049 Brassica carinata HOM05D005656 ORTHO05D007094 2.6e-218 761.9 425 91.3
C09p62910 Brassica napus HOM05D005656 ORTHO05D007094 3.7e-217 758.1 425 90.8
BolC9t59128H Brassica oleracea HOM05D005656 ORTHO05D007094 3.7e-217 758.1 425 90.8
BraA10t44487Z Brassica rapa HOM05D005656 ORTHO05D007094 7.0e-216 753.8 425 90.1
A10p24220 Brassica napus HOM05D005656 ORTHO05D007094 1.6e-215 752.7 425 90.1
A03p06510 Brassica napus HOM05D004649 ORTHO05D005446 4.0e-203 711.4 423 86.5
BraA02t05210Z Brassica rapa HOM05D004649 ORTHO05D005446 4.0e-203 711.4 426 85.9
A02p02400 Brassica napus HOM05D005656 ORTHO05D007094 5.2e-203 711.1 425 85.9
BcaC03g13505 Brassica carinata HOM05D004649 ORTHO05D005446 6.8e-203 710.7 427 86.4
Sp6g29780 Schrenkiella parvula HOM05D004649 ORTHO05D005446 6.8e-203 710.7 426 85.4
BcaNung03172 Brassica carinata HOM05D004649 ORTHO05D005446 8.9e-203 710.3 422 86.5
BolC2t06607H Brassica oleracea HOM05D005656 ORTHO05D005446 8.9e-203 710.3 426 86.4
C02p06640 Brassica napus HOM05D004649 ORTHO05D005446 2.6e-202 708.8 427 86.2
BraA03t09983Z Brassica rapa HOM05D004649 ORTHO05D005446 7.5e-202 707.2 423 85.8
Thhalv10013615m.g Eutrema salsugineum HOM05D004649 ORTHO05D005446 1.0e-198 696.8 426 83.6
BcaB01g06336 Brassica carinata HOM05D004649 ORTHO05D005446 2.4e-192 675.6 426 81.9
Carub.0006s1245 Capsella rubella HOM05D004649 ORTHO05D005446 1.2e-188 663.3 426 80.3
AT5G14250 Arabidopsis thaliana HOM05D004649 ORTHO05D005446 1.6e-188 662.9 426 80.3
Aa31LG11G15040 Aethionema arabicum HOM05D004649 ORTHO05D005446 1.2e-186 656.8 426 80.0
AL6G24930 Arabidopsis lyrata HOM05D004649 ORTHO05D005446 8.1e-180 634.0 426 77.5
THA.LOC104821114 Tarenaya hassleriana HOM05D004649 ORTHO05D005446 1.3e-169 600.1 426 72.8
CARHR199090 Cardamine hirsuta HOM05D004649 ORTHO05D005446 1.5e-165 586.6 430 71.6
Prupe.3G302400 Prunus persica HOM05D004649 ORTHO05D005446 2.8e-156 555.8 426 67.6
Duzib264G0046 Durio zibethinus HOM05D004649 ORTHO05D005446 1.3e-153 547.0 426 66.9
Manes.17G106100 Manihot esculenta HOM05D004649 ORTHO05D005446 1.3e-153 547.0 426 66.2
TWI36G0899 Tripterygium wilfordii HOM05D004649 ORTHO05D005446 1.3e-153 547.0 426 66.7
CSS0030171 Camellia sinensis var. sinensis HOM05D004649 ORTHO05D005446 2.2e-153 546.2 426 66.4
CSS0047966 Camellia sinensis var. sinensis HOM05D004649 ORTHO05D005446 6.4e-153 544.7 426 66.4
QL02p072453 Quercus lobata HOM05D004649 ORTHO05D005446 6.4e-153 544.7 425 67.1
Potri.001G334200 Populus trichocarpa HOM05D004649 ORTHO05D005446 1.9e-152 543.1 426 66.7
Atru.chr6.2512 Acer truncatum HOM05D004649 ORTHO05D005446 3.2e-152 542.3 426 66.2
Thecc.04G029900 Theobroma cacao HOM05D004649 ORTHO05D005446 4.2e-152 542.0 423 65.7
Gorai.012G088900 Gossypium raimondii HOM05D004649 ORTHO05D005446 9.3e-152 540.8 426 66.7
Glyma.05G075400 Glycine max HOM05D004649 ORTHO05D005446 2.1e-151 539.7 426 66.4
CANSAT64G0679 Cannabis sativa HOM05D004649 ORTHO05D005446 6.0e-151 538.1 426 66.0
Dinv33366 Davidia involucrata HOM05D004649 ORTHO05D005446 7.9e-151 537.7 426 65.7
Gohir.D04G079000 Gossypium hirsutum HOM05D004649 ORTHO05D005446 7.9e-151 537.7 426 66.4
GSVIVG01001824001 Vitis vinifera HOM05D004649 ORTHO05D005446 1.3e-150 537.0 426 65.5
Gohir.A05G340700 Gossypium hirsutum HOM05D004649 ORTHO05D005446 1.8e-150 536.6 426 66.0
Gorai.006G040000 Gossypium raimondii HOM05D004649 ORTHO05D005446 2.3e-150 536.2 426 65.7
CiPaw.04G034500 Carya illinoinensis HOM05D004649 ORTHO05D005446 5.1e-150 535.0 422 66.4
RcHm_v2.0_Chr2g0174731 Rosa chinensis HOM05D004649 ORTHO05D005446 5.1e-150 535.0 422 65.9
Nitab4.5_0000559g0250 Nicotiana tabacum HOM05D004649 ORTHO05D005446 1.1e-149 533.9 426 64.3
Gohir.A09G034200 Gossypium hirsutum HOM05D004649 ORTHO05D005446 1.5e-149 533.5 426 65.3
Dinv25679 Davidia involucrata HOM05D004649 ORTHO05D005446 3.3e-149 532.3 424 65.3
VMungo1080G0439 Vigna mungo HOM05D004649 ORTHO05D005446 5.6e-149 531.6 426 65.3
Ciclev10015345m.g Citrus clementina HOM05D004649 ORTHO05D005446 7.4e-149 531.2 426 65.3
TAR371G0838 Trochodendron aralioides HOM05D004649 ORTHO05D005446 7.4e-149 531.2 426 65.3
Sopen02g038570 Solanum pennellii HOM05D004649 ORTHO05D005446 1.6e-148 530.0 426 63.1
Cpa.g.sc130.9 Carica papaya HOM05D004649 ORTHO05D005446 8.2e-148 527.7 426 64.8
AUR62036815 Chenopodium quinoa HOM05D004649 ORTHO05D005446 1.4e-147 526.9 425 64.5
FAN09G0187 Fragaria x ananassa HOM05D004649 ORTHO05D005446 1.8e-147 526.6 422 64.2
Phvul.004G055700 Phaseolus vulgaris HOM05D004649 ORTHO05D005446 3.1e-147 525.8 426 64.8
Glyma.19G075700 Glycine max HOM05D004649 ORTHO05D005446 4.0e-147 525.4 426 64.6
arahy.Tifrunner.gnm1.ann1.2RTQ1W Arachis hypogaea HOM05D004649 ORTHO05D005446 5.3e-147 525.0 428 65.9
Solyc02g093920.2 Solanum lycopersicum HOM05D004649 ORTHO05D005446 5.3e-147 525.0 426 62.4
MELO3C008213.2 Cucumis melo HOM05D004649 ORTHO05D005446 9.0e-147 524.2 426 64.3
MD09G1015400 Malus domestica HOM05D004649 ORTHO05D005446 9.0e-147 524.2 426 63.8
MD17G1015500 Malus domestica HOM05D004649 ORTHO05D005446 9.0e-147 524.2 426 64.1
PGSC0003DMG400020222 Solanum tuberosum HOM05D004649 ORTHO05D005446 9.0e-147 524.2 426 62.2
AUR62033709 Chenopodium quinoa HOM05D004649 ORTHO05D005446 1.2e-146 523.9 426 64.3
FvH4_6g52990 Fragaria vesca HOM05D004649 ORTHO05D005446 1.5e-146 523.5 422 64.0
Rhsim10G0008900 Rhododendron simsii HOM05D004649 ORTHO05D005446 2.0e-146 523.1 427 64.2
Actinidia05924 Actinidia chinensis HOM05D004649 ORTHO05D005446 2.6e-146 522.7 427 64.4
vmacro05936 Vaccinium macrocarpon HOM05D004649 ORTHO05D005446 4.5e-146 521.9 426 64.3
FAN02G2492 Fragaria x ananassa HOM05D004649 ORTHO05D005446 5.8e-146 521.5 422 63.7
MSTRG.15559 Avicennia marina HOM05D004649 ORTHO05D005446 7.6e-146 521.2 426 62.9
CAN.G473.77 Capsicum annuum HOM05D004649 ORTHO05D005446 7.6e-146 521.2 426 62.7
Cc07_g00570 Coffea canephora HOM05D004649 ORTHO05D005446 1.7e-145 520.0 429 63.9
Nitab4.5_0006819g0030 Nicotiana tabacum HOM05D004649 ORTHO05D005446 1.7e-145 520.0 433 62.6
CsaV3_6G001150 Cucumis sativus L. HOM05D004649 ORTHO05D005446 2.9e-145 519.2 426 63.4
Migut.K01446 Erythranthe guttata HOM05D004649 ORTHO05D005446 2.9e-145 519.2 426 63.8
Ca_04417_v3 Cicer arietinum L. HOM05D004649 ORTHO05D005446 3.8e-145 518.8 427 63.7
Nitab4.5_0001031g0020 Nicotiana tabacum HOM05D004649 ORTHO05D005446 6.5e-145 518.1 426 62.0
HanXRQChr14g0450901 Helianthus annuus HOM05D004649 ORTHO05D005446 1.4e-144 516.9 426 62.0
Gohir.D09G035100 Gossypium hirsutum HOM05D004649 ORTHO05D005446 1.2e-143 513.8 426 63.6
Lsat_1_v5_gn_2_93941 Lactuca sativa HOM05D004649 ORTHO05D005446 1.2e-143 513.8 425 62.1
Medtr6g023350 Medicago truncatula HOM05D004649 ORTHO05D005446 1.2e-143 513.8 428 64.0
arahy.Tifrunner.gnm1.ann1.B3K3FC Arachis hypogaea HOM05D004649 ORTHO05D005446 2.7e-143 512.7 435 64.1
PGR142G2348 Punica granatum HOM05D004649 ORTHO05D005446 1.3e-142 510.4 422 64.0
Lalb_Chr02g0157841 Lupinus albus HOM05D004649 ORTHO05D005446 6.7e-142 508.1 428 62.6
CiPaw.03G052200 Carya illinoinensis HOM05D004649 ORTHO05D005446 1.1e-141 507.3 426 63.1
COL.COLO4_08766 Corchorus olitorius HOM05D004649 ORTHO05D005446 1.1e-141 507.3 422 64.7
SGA_v2.0_scaffold154G37160 Striga asiatica HOM05D004649 ORTHO05D005446 1.5e-141 506.9 425 63.1
TPR.G7524 Trifolium pratense HOM05D004649 ORTHO05D005446 3.3e-141 505.8 428 62.6
CAN.G1965.13 Capsicum annuum HOM05D004649 ORTHO05D005446 4.3e-141 505.4 423 62.2
ECA238G0199 Erigeron canadensis HOM05D004649 ORTHO05D005446 4.3e-141 505.4 426 61.3
BcaB01g05123 Brassica carinata HOM05D004649 ORTHO05D005446 3.7e-140 502.3 393 71.0
DCAR_011306 Daucus carota HOM05D004649 ORTHO05D005446 3.7e-140 502.3 427 60.7
Duzib147G0539 Durio zibethinus HOM05D004649 ORTHO05D005446 8.2e-140 501.1 426 62.7
Aqoxy5G03494 Aquilegia oxysepala HOM05D004649 ORTHO05D005446 5.3e-139 498.4 430 60.9
HanXRQChr07g0198311 Helianthus annuus HOM05D004649 ORTHO05D005446 5.3e-139 498.4 426 60.6
Eucgr.I01664 Eucalyptus grandis HOM05D004649 ORTHO05D005446 9.0e-139 497.7 403 64.3
FAN05G5354 Fragaria x ananassa HOM05D004649 ORTHO05D005446 1.2e-138 497.3 464 58.2
Lj1g0022023 Lotus japonicus HOM05D004649 ORTHO05D005446 7.6e-138 494.6 428 61.7
ClCG11G006900 Citrullus lanatus HOM05D004649 ORTHO05D005446 3.8e-137 492.3 460 58.3
CDE09G0552 Ceratophyllum demersum HOM05D004649 ORTHO05D005446 1.4e-136 490.3 426 60.1
Haze_14832 Corylus avellana HOM05D004649 ORTHO05D005446 4.2e-136 488.8 459 58.6
Psat1g084880 Pisum sativum HOM05D004649 ORTHO05D005446 7.2e-136 488.0 428 61.4
Sed0002339 Sechium edule HOM05D004649 ORTHO05D005446 2.1e-135 486.5 426 60.3
C03p07530 Brassica napus HOM05D004649 ORTHO05D005446 3.0e-134 482.6 349 74.5
Peaxi162Scf00700g00129 Petunia axillaris HOM05D004649 ORTHO05D005446 3.0e-134 482.6 420 61.2
Peaxi162Scf00420g00411 Petunia axillaris HOM05D004649 ORTHO05D005446 1.5e-133 480.3 434 59.4
PSO782G5348 Papaver somniferum HOM05D004649 ORTHO05D005446 6.9e-131 471.5 425 59.8
HPP92_017768 Vanilla planifolia HOM05D004649 ORTHO05D005446 2.0e-130 469.9 423 57.2
Gohir.D10G084700 Gossypium hirsutum HOM05D004649 ORTHO05D005446 3.4e-130 469.2 426 58.9
Gorai.011G092400 Gossypium raimondii HOM05D004649 ORTHO05D005446 1.9e-128 463.4 426 59.9
Nitab4.5_0002887g0140 Nicotiana tabacum HOM05D004649 ORTHO05D005446 1.6e-127 460.3 423 57.7
Hund06757 Selenicereus undatus HOM05D004649 ORTHO05D005446 1.6e-127 460.3 426 58.9
Nn2g10549 Nelumbo nucifera HOM05D004649 ORTHO05D005446 3.3e-125 452.6 426 57.7
DCAR_015086 Daucus carota HOM05D004649 ORTHO05D005446 2.8e-124 449.5 422 54.7
Sc07g0004210 Simmondsia chinensis HOM05D004649 ORTHO05D005446 1.4e-123 447.2 383 61.6
Lj7C608T4 Lonicera japonica HOM05D004649 ORTHO05D005446 1.8e-123 446.8 426 57.7
Potri.017G066300 Populus trichocarpa HOM05D004649 ORTHO05D005446 9.1e-123 444.5 325 69.8
Zm00001eb261210 Zea mays HOM05D004649 ORTHO05D005446 3.4e-122 442.6 426 55.6
Os08g0119000 Oryza sativa ssp. japonica HOM05D004649 ORTHO05D005446 1.3e-121 440.7 427 56.0
Manes.15G158000 Manihot esculenta HOM05D004649 ORTHO05D005446 1.0e-118 431.0 312 70.8
Sed0000018 Sechium edule HOM05D004649 ORTHO05D005446 2.0e-117 426.8 426 55.4
unitig_52.g17652 Utricularia gibba HOM05D004649 ORTHO05D005446 9.7e-117 424.5 440 55.0
Aqoxy3G01472 Aquilegia oxysepala HOM05D004649 ORTHO05D005446 6.3e-116 421.8 427 56.0
ATR0124G048 Amborella trichopoda HOM05D004649 ORTHO05D005446 1.9e-112 410.2 361 59.6
Mapoly0005s0216 Marchantia polymorpha HOM05D004649 ORTHO05D005446 1.8e-110 403.7 428 50.5
CDE02G4363 Ceratophyllum demersum HOM05D004649 ORTHO05D005446 2.8e-108 396.4 447 51.9
Pp3c11_20060 Physcomitrium patens HOM05D004649 ORTHO05D005446 3.1e-107 392.9 428 48.4
C09p61600 Brassica napus HOM05D004649 ORTHO05D005446 1.2e-106 391.0 325 68.0
SMO351G0195 Selaginella moellendorffii HOM05D004649 ORTHO05D005446 4.5e-106 389.0 424 49.8
AagrBONN_evm.TU.Sc2ySwM_368.1057 Anthoceros agrestis HOM05D004649 ORTHO05D005446 5.5e-104 382.1 452 47.1
EL10As11g23981 Beta vulgaris HOM05D004649 ORTHO05D005446 8.0e-103 378.3 389 53.7
BcaC04g18970 Brassica carinata HOM05D004649 ORTHO05D005446 5.4e-99 365.5 370 60.3
PSO017G3153 Papaver somniferum HOM05D004649 ORTHO05D005446 4.2e-96 355.9 399 51.6
CBR_g75710 Chara braunii HOM05D004649 ORTHO05D005446 1.5e-93 347.4 433 46.4
Sabra16G0215300 Salix brachista HOM05D004649 ORTHO05D005446 5.0e-89 332.4 242 71.5
BolC9t59028H Brassica oleracea HOM05D004649 ORTHO05D005446 1.1e-88 331.3 306 64.4
Hma1.2p1_0571F.1_g180750 Hydrangea macrophylla HOM05D004649 ORTHO05D005446 1.5e-85 320.9 240 70.8
Nn3g16527 Nelumbo nucifera HOM05D004649 ORTHO05D005446 7.5e-85 318.5 283 58.3
Zm00001eb173540 Zea mays HOM05D004649 ORTHO05D005446 4.6e-82 309.3 322 52.5
Actinidia36180 Actinidia chinensis HOM05D004649 ORTHO05D005446 7.8e-82 308.5 427 45.4
A03p07400 Brassica napus HOM05D004649 ORTHO05D005446 6.6e-81 305.4 195 81.5
BraA03t10063Z Brassica rapa HOM05D004649 ORTHO05D005446 2.7e-74 283.5 194 75.8
Cre16.g671100 Chlamydomonas reinhardtii HOM05D004649 ORTHO05D005446 2.4e-67 260.4 431 38.7
PRCOL_00002547 Prasinoderma coloniale HOM05D004649 ORTHO05D005446 3.1e-62 243.4 333 42.9
Gohir.A01G185660 Gossypium hirsutum HOM05D004649 ORTHO05D005446 4.6e-58 229.6 214 57.5
CAN.G473.64 Capsicum annuum HOM05D004649 ORTHO05D005446 9.6e-48 195.3 176 61.9
BolC3t13254H Brassica oleracea HOM05D004649 ORTHO05D005446 7.6e-45 185.7 106 89.6
SEGI_26946 Sequoiadendron giganteum HOM05D004649 ORTHO05D005446 3.1e-38 163.7 142 57.0
Sabra07G0059200 Salix brachista HOM05D004649 ORTHO05D005446 1.2e-37 161.8 247 42.1
BcaB08g36975 Brassica carinata HOM05D005656 ORTHO05D007094 1.1e-32 145.2 75 96.0
MCO12G022 Micromonas commoda HOM05D004649 ORTHO05D005446 4.3e-32 143.3 340 30.0
Sabra07G0059100 Salix brachista HOM05D005682 ORTHO05D007050 4.6e-26 123.2 314 29.9
FAN09G3197 Fragaria x ananassa HOM05D004649 ORTHO05D005446 9.0e-22 109.0 80 57.5
QL12p000006 Quercus lobata HOM05D004649 ORTHO05D005446 1.4e-17 95.1 78 59.0
QL12p000135 Quercus lobata HOM05D004649 ORTHO05D005446 1.4e-17 95.1 78 59.0
Duzib268G1750 Durio zibethinus HOM05D004649 ORTHO05D005446 2.8e-15 87.4 124 41.1
C03p08440 Brassica napus HOM05D002468 ORTHO05D005371 4.5e-13 80.1 49 77.6
BolC3t13348H Brassica oleracea HOM05D002468 ORTHO05D005371 4.5e-13 80.1 49 77.6
Oeu042415.1 Olea europaea HOM05D004649 ORTHO05D005446 3.2e-11 73.9 48 75.0
Aqoxy5G03476 Aquilegia oxysepala HOM05D004649 ORTHO05D005446 2.7e-10 70.9 62 56.5
FvH4_2g01181 Fragaria vesca HOM05D000564 ORTHO05D005446 5.1e-09 66.6 53 69.8
Hma1.2p1_0571F.1_g180740 Hydrangea macrophylla HOM05D004649 ORTHO05D005446 9.7e-08 62.4 62 50.0


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