Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g36820 Brassica carinata HOM05D001038 ORTHO05D016703 3.5e-200 701.4 363 100.0
C09p60390 Brassica napus HOM05D001038 ORTHO05D016703 2.8e-173 612.1 336 94.9
BolC9t55839H Brassica oleracea HOM05D001038 ORTHO05D016703 1.8e-172 609.4 356 89.9
BcaC04g21625 Brassica carinata HOM05D001038 ORTHO05D016703 5.9e-171 604.4 334 94.0
BraA05t19810Z Brassica rapa HOM05D001038 ORTHO05D016703 6.6e-114 414.8 354 65.0
C07p13440 Brassica napus HOM05D001038 ORTHO05D016703 9.9e-102 374.4 326 64.7
BolC7t41839H Brassica oleracea HOM05D001038 ORTHO05D016703 9.9e-102 374.4 326 64.7
BcaC06g35568 Brassica carinata HOM05D001038 ORTHO05D016703 6.4e-93 345.1 347 59.7
BcaB07g33632 Brassica carinata HOM05D001038 ORTHO05D016703 3.1e-71 273.1 263 60.5
BcaB07g32041 Brassica carinata HOM05D001038 ORTHO05D016703 2.2e-53 213.8 241 50.2
A06p26770 Brassica napus HOM05D001038 ORTHO05D041898 3.6e-43 179.9 194 56.7
BraA10t43039Z Brassica rapa HOM05D001038 ORTHO05D000395 1.7e-29 134.4 394 32.2
BcaC08g44444 Brassica carinata HOM05D001038 ORTHO05D016716 5.0e-29 132.9 177 42.9
A04p22180 Brassica napus HOM05D001038 ORTHO05D000395 5.0e-29 132.9 394 32.0
BcaB01g01349 Brassica carinata HOM05D001038 ORTHO05D096136 1.9e-28 131.0 299 33.8
BcaC05g28787 Brassica carinata HOM05D001038 ORTHO05D016716 2.8e-27 127.1 142 50.0
BcaB08g35144 Brassica carinata HOM05D001038 ORTHO05D021599 8.9e-26 122.1 150 46.7
BcaB06g27482 Brassica carinata HOM05D001038 ORTHO05D093375 4.9e-24 116.3 241 39.4
BcaB07g32567 Brassica carinata HOM05D001038 ORTHO05D010763 8.3e-24 115.5 287 35.2
C07p11920 Brassica napus HOM05D001038 ORTHO05D031981 1.0e-21 108.6 174 41.4
BolC7t40492H Brassica oleracea HOM05D001038 ORTHO05D010763 1.0e-21 108.6 121 54.5
C07p34820 Brassica napus HOM05D001038 ORTHO05D000395 1.6e-19 101.3 166 37.3
BolC9t58942H Brassica oleracea HOM05D001038 ORTHO05D010763 3.6e-19 100.1 376 29.5
C07p11760 Brassica napus HOM05D001038 ORTHO05D024045 8.0e-19 99.0 171 36.8
A03p31860 Brassica napus HOM05D001038 ORTHO05D024045 3.4e-17 93.6 168 36.9
A03p51100 Brassica napus HOM05D001038 ORTHO05D024045 3.4e-17 93.6 168 36.9
BcaC08g46990 Brassica carinata HOM05D025413 ORTHO05D021599 4.4e-17 93.2 110 48.2
BcaNung01360 Brassica carinata HOM05D001038 ORTHO05D010763 5.8e-17 92.8 172 37.2
C06p18900 Brassica napus HOM05D001038 ORTHO05D016716 5.8e-17 92.8 334 26.9
BcaC08g44142 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-15 88.6 151 39.7
BcaB07g33328 Brassica carinata HOM05D001038 ORTHO05D010763 2.4e-15 87.4 176 35.8
BcaB02g06555 Brassica carinata HOM05D001038 ORTHO05D010763 4.1e-15 86.7 167 37.1
BcaC06g35713 Brassica carinata HOM05D001038 ORTHO05D024045 5.4e-15 86.3 171 35.7
BcaB06g25472 Brassica carinata HOM05D001038 ORTHO05D010763 7.0e-15 85.9 339 27.7
BcaB07g32737 Brassica carinata HOM05D001038 ORTHO05D000395 7.0e-15 85.9 135 39.3
BraA10t43660Z Brassica rapa HOM05D025413 ORTHO05D021599 9.2e-15 85.5 90 53.3
BcaC03g15830 Brassica carinata HOM05D001038 ORTHO05D016716 1.2e-14 85.1 79 57.0
BcaB01g01825 Brassica carinata HOM05D001038 ORTHO05D000395 1.6e-14 84.7 179 34.6
BcaB04g17690 Brassica carinata HOM05D001038 ORTHO05D018589 1.6e-14 84.7 140 37.1
BcaC07g39263 Brassica carinata HOM05D001038 ORTHO05D016776 1.6e-14 84.7 139 37.4
BraA06t24545Z Brassica rapa HOM05D001038 ORTHO05D024045 1.6e-14 84.7 162 36.4
BcaB05g22891 Brassica carinata HOM05D001038 ORTHO05D010763 2.0e-14 84.3 155 35.5
BcaB06g26737 Brassica carinata HOM05D001038 ORTHO05D010763 2.0e-14 84.3 166 36.1
BraA08t34217Z Brassica rapa HOM05D001038 ORTHO05D016716 4.6e-14 83.2 86 46.5
BcaC06g35698 Brassica carinata HOM05D001038 ORTHO05D031981 1.0e-13 82.0 94 44.7
BcaC02g08100 Brassica carinata HOM05D001038 ORTHO05D018589 3.0e-13 80.5 146 35.6
C05p48930 Brassica napus HOM05D001038 ORTHO05D016716 3.0e-13 80.5 344 25.0
BolC5t33633H Brassica oleracea HOM05D001038 ORTHO05D016716 3.0e-13 80.5 344 25.0
BcaB03g16464 Brassica carinata HOM05D001038 ORTHO05D018589 3.9e-13 80.1 144 36.8
A10p08770 Brassica napus HOM05D001038 ORTHO05D016776 6.6e-13 79.3 87 48.3
BraSC37t46126Z Brassica rapa HOM05D001038 ORTHO05D016776 6.6e-13 79.3 87 48.3
C08p22730 Brassica napus HOM05D001038 ORTHO05D016776 1.5e-12 78.2 87 48.3
BolC4t27749H Brassica oleracea HOM05D001038 ORTHO05D016776 1.5e-12 78.2 87 48.3
BcaC01g03622 Brassica carinata HOM05D001038 ORTHO05D016776 1.9e-12 77.8 87 47.1
A05p23600 Brassica napus HOM05D001038 ORTHO05D018589 5.6e-12 76.3 140 37.1
BraA05t21228Z Brassica rapa HOM05D001038 ORTHO05D018589 5.6e-12 76.3 140 37.1
BcaC08g46850 Brassica carinata HOM05D001038 ORTHO05D000395 9.5e-12 75.5 149 37.6
BcaC06g36746 Brassica carinata HOM05D001038 ORTHO05D010763 1.2e-11 75.1 136 39.0
BcaB04g19629 Brassica carinata HOM05D001038 ORTHO05D000395 2.1e-11 74.3 131 37.4
BcaC05g27690 Brassica carinata HOM05D001038 ORTHO05D016716 2.1e-11 74.3 66 54.5
C04p40350 Brassica napus HOM05D001038 ORTHO05D016776 3.6e-11 73.6 87 47.1
BolC4t25613H Brassica oleracea HOM05D001038 ORTHO05D016776 3.6e-11 73.6 87 47.1
BcaB05g22095 Brassica carinata HOM05D001038 ORTHO05D016776 8.0e-11 72.4 90 43.3
BolC5t32403H Brassica oleracea HOM05D001038 ORTHO05D016716 8.0e-11 72.4 338 24.6
BcaB02g10939 Brassica carinata HOM05D001038 ORTHO05D000395 1.4e-10 71.6 132 38.6
BcaB01g01601 Brassica carinata HOM05D001038 ORTHO05D090378 5.2e-10 69.7 99 38.4
BolC7t41164H Brassica oleracea HOM05D001038 ORTHO05D000395 5.2e-10 69.7 156 32.7
BolC4t26248H Brassica oleracea HOM05D001038 ORTHO05D018589 8.9e-10 68.9 137 35.8
BraA06t24004Z Brassica rapa HOM05D001038 ORTHO05D041898 1.2e-09 68.6 135 35.6
BcaB06g26720 Brassica carinata HOM05D001038 ORTHO05D000395 2.6e-09 67.4 136 37.5
BcaC08g44172 Brassica carinata HOM05D001038 ORTHO05D018589 3.4e-09 67.0 135 35.6
BcaNung00468 Brassica carinata HOM05D001038 ORTHO05D000395 4.4e-09 66.6 160 31.9
BcaB02g10756 Brassica carinata HOM05D000367 ORTHO05D001227 1.3e-08 65.1 97 44.3
BraA09t41072Z Brassica rapa HOM05D001038 ORTHO05D000395 1.7e-08 64.7 234 25.6
BraA02t06821Z Brassica rapa HOM05D001038 ORTHO05D000395 2.2e-08 64.3 156 30.8
BcaB01g01915 Brassica carinata HOM05D001038 ORTHO05D000395 4.9e-08 63.2 168 33.3
BcaB04g17766 Brassica carinata HOM05D001038 ORTHO05D000395 4.9e-08 63.2 136 34.6
BcaB05g25087 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-07 62.0 137 31.4
BcaNung00229 Brassica carinata HOM05D001038 ORTHO05D000395 1.4e-07 61.6 136 34.6
C05p37200 Brassica napus HOM05D001038 ORTHO05D017560 4.1e-07 60.1 139 34.5
BcaB08g34782 Brassica carinata HOM05D001038 ORTHO05D000395 7.0e-07 59.3 73 41.1
BcaC06g36128 Brassica carinata HOM05D007774 ORTHO05D000395 1.2e-06 58.5 123 33.3
C07p07480 Brassica napus HOM05D001038 ORTHO05D000395 1.6e-06 58.2 123 32.5
C09p39680 Brassica napus HOM05D001038 ORTHO05D010763 1.6e-06 58.2 136 33.8
BraA02t07755Z Brassica rapa HOM05D001038 ORTHO05D000395 1.6e-06 58.2 134 30.6
BcaB08g34565 Brassica carinata HOM05D001038 ORTHO05D000395 2.1e-06 57.8 134 34.3
BcaC04g20742 Brassica carinata HOM05D001038 ORTHO05D010763 2.7e-06 57.4 136 33.8
BcaC05g25823 Brassica carinata HOM05D001038 ORTHO05D014932 3.5e-06 57.0 133 34.6
A09p34780 Brassica napus HOM05D001038 ORTHO05D000395 4.6e-06 56.6 169 27.8
BolC7t41626H Brassica oleracea HOM05D001038 ORTHO05D014932 4.6e-06 56.6 133 34.6
BraA06t25412Z Brassica rapa HOM05D001038 ORTHO05D017560 6.0e-06 56.2 134 31.3


User provided reference genes

Program Settings