Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g35370 Brassica carinata HOM05D004653 ORTHO05D006221 3.3e-29 131.0 63 100.0
Sp6g11760 Schrenkiella parvula HOM05D004653 ORTHO05D006221 4.1e-19 97.4 57 82.5
CARHR258740 Cardamine hirsuta HOM05D004653 ORTHO05D006221 1.2e-18 95.9 56 80.4
AL8G23940 Arabidopsis lyrata HOM05D004653 ORTHO05D006221 5.9e-18 93.6 57 78.9
AT5G49970 Arabidopsis thaliana HOM05D004653 ORTHO05D006221 5.9e-18 93.6 57 78.9
Carub.0008s0987 Capsella rubella HOM05D004653 ORTHO05D006221 5.9e-18 93.6 57 78.9
Thhalv10013217m.g Eutrema salsugineum HOM05D004653 ORTHO05D006221 7.2e-16 86.7 57 73.7
THA.LOC104799811 Tarenaya hassleriana HOM05D004653 ORTHO05D006221 6.1e-15 83.6 57 71.9
arahy.Tifrunner.gnm1.ann1.QAT0QL Arachis hypogaea HOM05D004653 ORTHO05D006221 1.0e-14 82.8 57 68.4
arahy.Tifrunner.gnm1.ann1.Y1WP0G Arachis hypogaea HOM05D004653 ORTHO05D006221 1.0e-14 82.8 57 68.4
BcaC01g04840 Brassica carinata HOM05D004653 ORTHO05D006221 1.0e-14 82.8 57 73.7
Nn1g05497 Nelumbo nucifera HOM05D004653 ORTHO05D006221 1.8e-14 82.0 56 71.4
C03p33300 Brassica napus HOM05D004653 ORTHO05D006221 2.3e-14 81.6 57 71.9
BolC3t15652H Brassica oleracea HOM05D004653 ORTHO05D006221 2.3e-14 81.6 57 71.9
BcaB01g02929 Brassica carinata HOM05D004653 ORTHO05D006221 3.0e-14 81.3 57 73.7
Lj1g0013887 Lotus japonicus HOM05D004653 ORTHO05D006221 3.0e-14 81.3 57 66.7
HanXRQChr02g0047071 Helianthus annuus HOM05D004653 ORTHO05D006221 3.9e-14 80.9 56 67.9
A03p27590 Brassica napus HOM05D004653 ORTHO05D006221 5.1e-14 80.5 57 71.9
BraA03t11972Z Brassica rapa HOM05D004653 ORTHO05D006221 5.1e-14 80.5 57 71.9
Lalb_Chr23g0270171 Lupinus albus HOM05D004653 ORTHO05D006221 5.1e-14 80.5 57 64.9
Lalb_Chr23g0270281 Lupinus albus HOM05D004653 ORTHO05D006221 5.1e-14 80.5 57 64.9
MBI06_g18790_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 6.7e-14 80.1 56 67.9
Phvul.009G037700 Phaseolus vulgaris HOM05D004653 ORTHO05D006221 6.7e-14 80.1 57 68.4
GSVIVG01009125001 Vitis vinifera HOM05D004653 ORTHO05D006221 6.7e-14 80.1 57 66.7
Atru.chr13.1058 Acer truncatum HOM05D004653 ORTHO05D006221 1.1e-13 79.3 57 68.4
Peaxi162Scf00017g00233 Petunia axillaris HOM05D004653 ORTHO05D006221 1.1e-13 79.3 56 64.3
Ciclev10000790m.g Citrus clementina HOM05D004653 ORTHO05D006221 1.5e-13 79.0 56 69.6
Ciclev10001057m.g Citrus clementina HOM05D004653 ORTHO05D006221 1.5e-13 79.0 56 69.6
Cfa013708 Carpinus fangiana HOM05D004653 ORTHO05D006221 1.9e-13 78.6 56 66.1
Haze_22352 Corylus avellana HOM05D004653 ORTHO05D006221 1.9e-13 78.6 56 66.1
Gorai.009G279800 Gossypium raimondii HOM05D004653 ORTHO05D006221 1.9e-13 78.6 57 66.7
Prupe.1G526800 Prunus persica HOM05D004653 ORTHO05D006221 1.9e-13 78.6 57 63.2
CiPaw.07G169200 Carya illinoinensis HOM05D004653 ORTHO05D006221 2.5e-13 78.2 56 67.9
Gohir.D05G267700 Gossypium hirsutum HOM05D004653 ORTHO05D006221 2.5e-13 78.2 57 66.7
Aa31sc34G110 Aethionema arabicum HOM05D004653 ORTHO05D006221 3.3e-13 77.8 57 66.7
CANSAT11G2183 Cannabis sativa HOM05D004653 ORTHO05D006221 3.3e-13 77.8 57 64.9
Ca_15984_v3 Cicer arietinum L. HOM05D004653 ORTHO05D006221 4.3e-13 77.4 57 64.9
Lj4C92G16 Lonicera japonica HOM05D004653 ORTHO05D006221 4.3e-13 77.4 57 66.7
Sc01g0000970 Simmondsia chinensis HOM05D004653 ORTHO05D006221 4.3e-13 77.4 57 68.4
Manes.02G147500 Manihot esculenta HOM05D004653 ORTHO05D006221 7.4e-13 76.6 57 64.9
Psat5g045400 Pisum sativum HOM05D004653 ORTHO05D006221 7.4e-13 76.6 57 66.7
Thecc.08G066400 Theobroma cacao HOM05D004653 ORTHO05D006221 7.4e-13 76.6 57 64.9
TAR376G1013 Trochodendron aralioides HOM05D004653 ORTHO05D006221 7.4e-13 76.6 56 66.1
Cc04_g13590 Coffea canephora HOM05D004653 ORTHO05D006221 9.7e-13 76.3 56 67.9
PSO541G1602 Papaver somniferum HOM05D004653 ORTHO05D006221 9.7e-13 76.3 57 64.9
TPR.G26053 Trifolium pratense HOM05D004653 ORTHO05D006221 9.7e-13 76.3 58 67.2
VMungo1309G1466 Vigna mungo HOM05D004653 ORTHO05D006221 9.7e-13 76.3 57 64.9
AUR62019003 Chenopodium quinoa HOM05D004653 ORTHO05D006221 1.3e-12 75.9 56 66.1
Aqoxy6G01474 Aquilegia oxysepala HOM05D004653 ORTHO05D006221 1.6e-12 75.5 56 64.3
AUR62027845 Chenopodium quinoa HOM05D004653 ORTHO05D006221 1.6e-12 75.5 56 66.1
Os10g0377800 Oryza sativa ssp. japonica HOM05D004653 ORTHO05D006221 1.6e-12 75.5 56 67.9
Sc01g0000980 Simmondsia chinensis HOM05D004653 ORTHO05D006221 1.6e-12 75.5 57 68.4
Glyma.04G093600 Glycine max HOM05D004653 ORTHO05D006221 2.2e-12 75.1 58 67.2
Glyma.06G095500 Glycine max HOM05D004653 ORTHO05D006221 2.2e-12 75.1 58 67.2
PSO675G8871 Papaver somniferum HOM05D004653 ORTHO05D006221 2.2e-12 75.1 57 64.9
QL09p016947 Quercus lobata HOM05D004653 ORTHO05D006221 2.2e-12 75.1 56 64.3
Sabra02G0080400 Salix brachista HOM05D004653 ORTHO05D006221 2.2e-12 75.1 57 61.4
TWI56G0982 Tripterygium wilfordii HOM05D004653 ORTHO05D006221 2.2e-12 75.1 57 64.9
Sopen03g032820 Solanum pennellii HOM05D004653 ORTHO05D006221 2.8e-12 74.7 56 62.5
TAR628G1442 Trochodendron aralioides HOM05D004653 ORTHO05D006221 2.8e-12 74.7 56 64.3
EL10Ac1g01097 Beta vulgaris HOM05D004653 ORTHO05D006221 3.7e-12 74.3 56 62.5
CSS0007986 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 3.7e-12 74.3 56 58.9
CSS0025013 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 3.7e-12 74.3 56 58.9
Migut.I00061 Erythranthe guttata HOM05D004653 ORTHO05D006221 3.7e-12 74.3 57 61.4
Hund26999 Selenicereus undatus HOM05D004653 ORTHO05D006221 3.7e-12 74.3 56 64.3
Cpa.g.sc36.204 Carica papaya HOM05D004653 ORTHO05D006221 4.8e-12 73.9 56 64.3
Dinv44830 Davidia involucrata HOM05D004653 ORTHO05D006221 4.8e-12 73.9 56 64.3
unitig_26.g9628 Utricularia gibba HOM05D004653 ORTHO05D006221 4.8e-12 73.9 57 63.2
CAN.G853.20 Capsicum annuum HOM05D004653 ORTHO05D006221 6.3e-12 73.6 56 60.7
Cc07_g19270 Coffea canephora HOM05D004653 ORTHO05D006221 6.3e-12 73.6 57 57.9
Eucgr.F02123 Eucalyptus grandis HOM05D004653 ORTHO05D006221 6.3e-12 73.6 57 59.6
Actinidia30803 Actinidia chinensis HOM05D004653 ORTHO05D006221 8.2e-12 73.2 57 59.6
MSTRG.23086 Avicennia marina HOM05D004653 ORTHO05D006221 8.2e-12 73.2 57 63.2
MBI02_g18292_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 8.2e-12 73.2 56 64.3
MD15G1380600 Malus domestica HOM05D004653 ORTHO05D006221 8.2e-12 73.2 57 61.4
Manes.18G062000 Manihot esculenta HOM05D004653 ORTHO05D006221 8.2e-12 73.2 56 64.3
PGSC0003DMG401024581 Solanum tuberosum HOM05D004653 ORTHO05D006221 8.2e-12 73.2 57 61.4
ECA247G2604 Erigeron canadensis HOM05D004653 ORTHO05D006221 1.1e-11 72.8 56 64.3
Lsat_1_v5_gn_1_2401 Lactuca sativa HOM05D004653 ORTHO05D006221 1.1e-11 72.8 56 60.7
Lalb_Chr11g0065151 Lupinus albus HOM05D004653 ORTHO05D006221 1.1e-11 72.8 57 61.4
MBI17_g06166_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 1.1e-11 72.8 57 63.2
Solyc03g113770.3 Solanum lycopersicum HOM05D004653 ORTHO05D006221 1.1e-11 72.8 56 58.9
CAN.G853.18 Capsicum annuum HOM05D004653 ORTHO05D006221 1.4e-11 72.4 57 59.6
COL.COLO4_11961 Corchorus olitorius HOM05D004653 ORTHO05D006221 1.4e-11 72.4 57 59.6
MELO3C003541.2 Cucumis melo HOM05D004653 ORTHO05D006221 1.4e-11 72.4 57 61.4
PGR031G0949 Punica granatum HOM05D004653 ORTHO05D006221 1.4e-11 72.4 57 64.9
ATR0022G001 Amborella trichopoda HOM05D004653 ORTHO05D006221 1.8e-11 72.0 56 62.5
MSTRG.23084 Avicennia marina HOM05D004653 ORTHO05D006221 1.8e-11 72.0 56 60.7
ClCG11G014410 Citrullus lanatus HOM05D004653 ORTHO05D006221 1.8e-11 72.0 57 57.9
MD08G1191800 Malus domestica HOM05D004653 ORTHO05D006221 1.8e-11 72.0 57 59.6
vmacro22331 Vaccinium macrocarpon HOM05D004653 ORTHO05D006221 1.8e-11 72.0 56 57.1
Zm00001eb027880 Zea mays HOM05D004653 ORTHO05D006221 1.8e-11 72.0 56 66.1
CsaV3_3G047810 Cucumis sativus L. HOM05D004653 ORTHO05D006221 2.4e-11 71.6 57 61.4
Sed0021217 Sechium edule HOM05D004653 ORTHO05D006221 2.4e-11 71.6 57 57.9
Solyc03g113780.3 Solanum lycopersicum HOM05D004653 ORTHO05D006221 2.4e-11 71.6 57 59.6
CSS0017284 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 3.1e-11 71.2 56 57.1
Migut.I00062 Erythranthe guttata HOM05D004653 ORTHO05D006221 3.1e-11 71.2 56 62.5
FAN13G0646 Fragaria x ananassa HOM05D004653 ORTHO05D006221 3.1e-11 71.2 57 57.9
Oeu018527.2 Olea europaea HOM05D004653 ORTHO05D006221 3.1e-11 71.2 56 62.5
FAN04G0673 Fragaria x ananassa HOM05D004653 ORTHO05D006221 4.1e-11 70.9 57 57.9
Nitab4.5_0000642g0300 Nicotiana tabacum HOM05D004653 ORTHO05D006221 4.1e-11 70.9 57 59.6
Medtr3g100890 Medicago truncatula HOM05D004653 ORTHO05D006221 5.3e-11 70.5 58 63.8
Potri.002G102600 Populus trichocarpa HOM05D004653 ORTHO05D006221 5.3e-11 70.5 57 57.9
SGA_v2.0_scaffold25G10868 Striga asiatica HOM05D004653 ORTHO05D006221 6.9e-11 70.1 58 62.1
Nitab4.5_0007586g0050 Nicotiana tabacum HOM05D004653 ORTHO05D006221 9.1e-11 69.7 56 57.1
CSS0037453 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 1.2e-10 69.3 56 57.1
Nitab4.5_0024258g0010 Nicotiana tabacum HOM05D004653 ORTHO05D006221 1.2e-10 69.3 57 57.9
RcHm_v2.0_Chr7g0237681 Rosa chinensis HOM05D004653 ORTHO05D006221 1.2e-10 69.3 56 58.9
Hma1.2p1_0961F.1_g241730 Hydrangea macrophylla HOM05D004653 ORTHO05D006221 1.5e-10 68.9 57 56.1
Sopen03g032830 Solanum pennellii HOM05D004653 ORTHO05D006221 1.5e-10 68.9 57 57.9
TWI36G0595 Tripterygium wilfordii HOM05D004653 ORTHO05D006221 1.5e-10 68.9 57 59.6
FAN08G1395 Fragaria x ananassa HOM05D004653 ORTHO05D006221 2.0e-10 68.6 57 56.1
SalBow5G1317 Salvia bowleyana HOM05D004653 ORTHO05D006221 2.0e-10 68.6 57 56.1
CDE05G0914 Ceratophyllum demersum HOM05D004653 ORTHO05D006221 3.4e-10 67.8 56 60.7
FvH4_5g35940 Fragaria vesca HOM05D004653 ORTHO05D006221 3.4e-10 67.8 57 54.4
FAN18G1441 Fragaria x ananassa HOM05D004653 ORTHO05D006221 3.4e-10 67.8 57 54.4
SalBow5G2478 Salvia bowleyana HOM05D004653 ORTHO05D006221 4.5e-10 67.4 56 58.9
SEGI_17033 Sequoiadendron giganteum HOM05D004653 ORTHO05D006221 1.0e-09 66.2 60 51.7
Rhsim06G0074900 Rhododendron simsii HOM05D004653 ORTHO05D006221 1.7e-09 65.5 56 57.1
PGSC0003DMG400024580 Solanum tuberosum HOM05D004653 ORTHO05D006221 2.2e-09 65.1 54 55.6
Oeu042973.1 Olea europaea HOM05D004653 ORTHO05D006221 2.9e-09 64.7 56 57.1
DCAR_012873 Daucus carota HOM05D004653 ORTHO05D006221 6.5e-09 63.5 56 55.4
Oeu042971.1 Olea europaea HOM05D004653 ORTHO05D006221 8.5e-09 63.2 56 55.4
SGA_v2.0_scaffold467G52033 Striga asiatica HOM05D004653 ORTHO05D006221 4.2e-08 60.8 57 57.9
HPP92_004087 Vanilla planifolia HOM05D004653 ORTHO05D006221 4.2e-08 60.8 56 55.4
HPP92_004102 Vanilla planifolia HOM05D004653 ORTHO05D006221 4.2e-08 60.8 56 55.4
Dinv42645 Davidia involucrata HOM05D004653 ORTHO05D006221 9.4e-08 59.7 42 59.5
Pp3c2_19610 Physcomitrium patens HOM05D004653 ORTHO05D006221 9.4e-08 59.7 56 51.8
Mapoly0107s0030 Marchantia polymorpha HOM05D004653 ORTHO05D006221 7.9e-07 56.6 56 50.0
AagrBONN_evm.TU.Sc2ySwM_368.1227 Anthoceros agrestis HOM05D004653 ORTHO05D006221 3.0e-06 54.7 56 50.0


User provided reference genes

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