Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g34291 Brassica carinata HOM05D000325 ORTHO05D009400 1.7e-73 279.3 139 100.0
Sp1g11850 Schrenkiella parvula HOM05D000325 ORTHO05D002981 1.5e-18 96.7 77 68.8
BcaB03g13148 Brassica carinata HOM05D000325 ORTHO05D002981 3.8e-17 92.0 77 67.5
A08p32350 Brassica napus HOM05D007389 ORTHO05D009400 2.4e-16 89.4 77 66.2
BraA08t35158Z Brassica rapa HOM05D007389 ORTHO05D009400 7.1e-16 87.8 77 64.9
BcaC07g38688 Brassica carinata HOM05D000325 ORTHO05D002981 1.7e-14 83.2 77 64.9
C08p16080 Brassica napus HOM05D007389 ORTHO05D009400 1.7e-14 83.2 77 64.9
BolC8t49231H Brassica oleracea HOM05D000325 ORTHO05D002981 1.7e-14 83.2 77 64.9
CARHR013720 Cardamine hirsuta HOM05D000325 ORTHO05D002981 2.3e-14 82.8 73 61.6
AL1G25100 Arabidopsis lyrata HOM05D000325 ORTHO05D002981 3.0e-14 82.4 81 58.0
AT1G13340 Arabidopsis thaliana HOM05D000325 ORTHO05D002981 3.9e-14 82.0 77 62.3
Carub.0001s1307 Capsella rubella HOM05D000325 ORTHO05D002981 5.6e-13 78.2 77 57.1
Thhalv10007815m.g Eutrema salsugineum HOM05D000325 ORTHO05D002981 1.2e-10 70.5 59 69.5
A06p08420 Brassica napus HOM05D000325 ORTHO05D002981 2.0e-10 69.7 77 54.5
BraA06t24038Z Brassica rapa HOM05D000325 ORTHO05D002981 2.0e-10 69.7 77 54.5
C05p09960 Brassica napus HOM05D000325 ORTHO05D002981 5.8e-10 68.2 77 51.9
BcaC05g25056 Brassica carinata HOM05D000325 ORTHO05D002981 3.2e-08 62.4 76 50.0
Aa31LG1G1490 Aethionema arabicum HOM05D000325 ORTHO05D002981 3.9e-06 55.5 71 52.1


User provided reference genes

Program Settings