Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g34218 Brassica carinata HOM05D000020 ORTHO05D000156 4.2e-36 154.8 123 100.0
A02p41440 Brassica napus HOM05D000020 ORTHO05D000156 1.5e-25 119.8 119 68.9
BraA02t09086Z Brassica rapa HOM05D000020 ORTHO05D000156 1.5e-25 119.8 119 68.9
C02p61370 Brassica napus HOM05D000020 ORTHO05D000156 9.7e-25 117.1 116 69.0
BolC2t12186H Brassica oleracea HOM05D000020 ORTHO05D000156 9.7e-25 117.1 116 69.0
BcaC04g23463 Brassica carinata HOM05D000020 ORTHO05D000156 4.8e-24 114.8 119 74.8
C09p08070 Brassica napus HOM05D000020 ORTHO05D000156 4.8e-24 114.8 119 74.8
BolC9t53721H Brassica oleracea HOM05D000020 ORTHO05D000156 4.8e-24 114.8 119 74.8
AL8G37780 Arabidopsis lyrata HOM05D000020 ORTHO05D000156 1.1e-23 113.6 122 80.3
BcaC06g33177 Brassica carinata HOM05D000020 ORTHO05D000156 1.1e-23 113.6 119 77.3
BolC7t45006H Brassica oleracea HOM05D000020 ORTHO05D000156 1.1e-23 113.6 119 77.3
A03p46780 Brassica napus HOM05D000020 ORTHO05D000156 1.4e-23 113.2 119 65.5
CARHR274820 Cardamine hirsuta HOM05D000020 ORTHO05D000156 4.1e-23 111.7 119 56.3
AT5G61130 Arabidopsis thaliana HOM05D000020 ORTHO05D000156 9.0e-23 110.5 122 80.3
A09p07220 Brassica napus HOM05D000020 ORTHO05D000156 9.0e-23 110.5 119 73.9
BraA09t36372Z Brassica rapa HOM05D000020 ORTHO05D000156 9.0e-23 110.5 119 73.9
BraA03t13800Z Brassica rapa HOM05D000020 ORTHO05D000156 1.2e-22 110.2 119 66.4
C07p44820 Brassica napus HOM05D000020 ORTHO05D000156 2.9e-21 105.5 119 75.6
Sp2g24380 Schrenkiella parvula HOM05D000020 ORTHO05D000156 3.8e-21 105.1 149 69.1
Carub.0008s2180 Capsella rubella HOM05D000020 ORTHO05D000156 1.1e-20 103.6 126 74.6
Thhalv10004907m.g Eutrema salsugineum HOM05D000020 ORTHO05D000156 5.5e-20 101.3 137 60.6
Thhalv10014742m.g Eutrema salsugineum HOM05D000020 ORTHO05D000156 5.9e-14 81.3 111 69.4
AT5G08000 Arabidopsis thaliana HOM05D000020 ORTHO05D000156 2.2e-13 79.3 107 71.0
Aa31LG11G2220 Aethionema arabicum HOM05D000020 ORTHO05D000156 5.0e-13 78.2 124 44.4
Sp6g34950 Schrenkiella parvula HOM05D000020 ORTHO05D000156 8.5e-13 77.4 111 66.7
THA.LOC104818344 Tarenaya hassleriana HOM05D000020 ORTHO05D000156 1.9e-12 76.3 114 56.1
CARHR205190 Cardamine hirsuta HOM05D000020 ORTHO05D000156 5.5e-12 74.7 107 64.5
THA.LOC104819406 Tarenaya hassleriana HOM05D000020 ORTHO05D000156 2.1e-11 72.8 118 39.0
Carub.0006s0688 Capsella rubella HOM05D000020 ORTHO05D000156 3.6e-11 72.0 114 44.7
A10p28630 Brassica napus HOM05D000020 ORTHO05D000156 2.8e-08 62.4 130 46.9
C09p68920 Brassica napus HOM05D000020 ORTHO05D000156 2.4e-07 59.3 152 46.7
BolC9t59638H Brassica oleracea HOM05D000020 ORTHO05D000156 2.6e-06 55.8 143 43.4
Thhalv10008839m.g Eutrema salsugineum HOM05D000020 ORTHO05D000156 3.4e-06 55.5 123 36.6
BraA08t34961Z Brassica rapa HOM05D004985 ORTHO05D005912 4.5e-06 55.1 51 60.8
BcaC07g38934 Brassica carinata HOM05D000020 ORTHO05D000156 5.9e-06 54.7 114 36.0
BolC8t49508H Brassica oleracea HOM05D000020 ORTHO05D000156 5.9e-06 54.7 114 36.0
Carub.0001s1828 Capsella rubella HOM05D000020 ORTHO05D000156 5.9e-06 54.7 112 38.4
A08p30280 Brassica napus HOM05D004985 ORTHO05D005912 7.7e-06 54.3 51 60.8
MD14G1210900 Malus domestica HOM05D000020 ORTHO05D000156 7.7e-06 54.3 48 62.5


User provided reference genes

Program Settings