Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g33550 Brassica carinata HOM05D001239 ORTHO05D011709 4.5e-236 820.8 413 100.0
C01p30110 Brassica napus HOM05D001239 ORTHO05D023908 5.0e-17 93.2 178 44.9
BcaC04g19167 Brassica carinata HOM05D000496 ORTHO05D000411 3.2e-16 90.5 127 43.3
C09p49690 Brassica napus HOM05D001239 ORTHO05D011709 3.6e-15 87.0 166 42.2
BraA04t17766Z Brassica rapa HOM05D001239 ORTHO05D024427 4.7e-15 86.7 101 51.5
BcaB07g30912 Brassica carinata HOM05D000496 ORTHO05D000411 8.0e-15 85.9 206 35.0
BolC5t30244H Brassica oleracea HOM05D001239 ORTHO05D011709 8.0e-15 85.9 178 39.3
BcaC09g49677 Brassica carinata HOM05D000496 ORTHO05D011709 1.8e-14 84.7 190 36.3
C01p34040 Brassica napus HOM05D001239 ORTHO05D011709 1.8e-14 84.7 160 40.6
C03p49130 Brassica napus HOM05D014076 ORTHO05D024532 2.3e-14 84.3 174 42.5
C09p42620 Brassica napus HOM05D001239 ORTHO05D011709 3.0e-14 84.0 166 41.6
BcaC02g09195 Brassica carinata HOM05D001239 ORTHO05D031919 8.8e-14 82.4 156 40.4
BcaB07g32141 Brassica carinata HOM05D000496 ORTHO05D000411 3.4e-13 80.5 170 38.2
BcaB07g33352 Brassica carinata HOM05D004425 ORTHO05D005783 3.4e-13 80.5 55 78.2
BcaB08g35329 Brassica carinata HOM05D004425 ORTHO05D005783 3.4e-13 80.5 131 41.2
BolC2t10713H Brassica oleracea HOM05D001239 ORTHO05D011709 3.4e-13 80.5 203 36.9
BolC4t26715H Brassica oleracea HOM05D001239 ORTHO05D011709 3.4e-13 80.5 88 53.4
BcaB03g11924 Brassica carinata HOM05D001239 ORTHO05D011709 4.4e-13 80.1 82 54.9
BolC2t08478H Brassica oleracea HOM05D001239 ORTHO05D024427 4.4e-13 80.1 166 39.2
BcaC01g02173 Brassica carinata HOM05D001239 ORTHO05D017499 5.7e-13 79.7 141 40.4
C03p67910 Brassica napus HOM05D001239 ORTHO05D017499 5.7e-13 79.7 141 40.4
BcaB05g23185 Brassica carinata HOM05D001239 ORTHO05D023908 7.5e-13 79.3 108 44.4
BraA09t38239Z Brassica rapa HOM05D014076 ORTHO05D021903 1.3e-12 78.6 170 40.0
BcaC05g25304 Brassica carinata HOM05D000508 ORTHO05D000371 1.7e-12 78.2 135 43.7
BcaB04g18066 Brassica carinata HOM05D001239 ORTHO05D023908 2.2e-12 77.8 214 33.6
C05p11830 Brassica napus HOM05D001239 ORTHO05D033080 2.2e-12 77.8 191 36.6
BcaC01g01120 Brassica carinata HOM05D004425 ORTHO05D095244 2.8e-12 77.4 47 78.7
BcaC01g03871 Brassica carinata HOM05D001239 ORTHO05D011709 2.8e-12 77.4 99 50.5
BcaC05g27311 Brassica carinata HOM05D001239 ORTHO05D011709 3.7e-12 77.0 102 46.1
BraA01t01837Z Brassica rapa HOM05D014076 ORTHO05D021903 4.9e-12 76.6 170 37.6
BcaB01g01785 Brassica carinata HOM05D000496 ORTHO05D000925 6.3e-12 76.3 186 33.9
C04p30980 Brassica napus HOM05D001035 ORTHO05D021752 6.3e-12 76.3 98 53.1
BcaC04g22862 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-11 75.1 80 51.2
BcaB01g01306 Brassica carinata HOM05D004425 ORTHO05D005783 2.4e-11 74.3 113 46.9
BcaB01g02634 Brassica carinata HOM05D000496 ORTHO05D000411 4.1e-11 73.6 144 38.2
BcaB03g14063 Brassica carinata HOM05D004425 ORTHO05D005783 4.1e-11 73.6 111 45.0
BcaC06g36045 Brassica carinata HOM05D000496 ORTHO05D000411 4.1e-11 73.6 132 39.4
C02p57570 Brassica napus HOM05D001239 ORTHO05D011709 5.4e-11 73.2 81 54.3
BraA09t38523Z Brassica rapa HOM05D027742 ORTHO05D027054 9.2e-11 72.4 217 36.4
BcaC01g01482 Brassica carinata HOM05D009238 ORTHO05D021611 1.2e-10 72.0 281 30.6
C08p07070 Brassica napus HOM05D001239 ORTHO05D024427 1.2e-10 72.0 91 51.6
BolC1t02956H Brassica oleracea HOM05D001239 ORTHO05D023908 1.2e-10 72.0 151 43.0
BcaC01g05559 Brassica carinata HOM05D001239 ORTHO05D011709 3.5e-10 70.5 123 43.9
BcaC02g11658 Brassica carinata HOM05D014076 ORTHO05D021903 4.5e-10 70.1 168 36.3
BcaC07g40131 Brassica carinata HOM05D014076 ORTHO05D000006 4.5e-10 70.1 183 36.1
BolC8t47551H Brassica oleracea HOM05D001239 ORTHO05D024427 4.5e-10 70.1 91 50.5
BcaB02g06626 Brassica carinata HOM05D004425 ORTHO05D005783 7.8e-10 69.3 152 32.9
BcaB06g26119 Brassica carinata HOM05D001239 ORTHO05D011709 1.0e-09 68.9 189 37.0
C07p04310 Brassica napus HOM05D001239 ORTHO05D011709 2.3e-09 67.8 146 41.1
BcaC02g12033 Brassica carinata HOM05D001239 ORTHO05D011709 3.8e-09 67.0 179 32.4
C06p18600 Brassica napus HOM05D001239 ORTHO05D017499 6.6e-09 66.2 170 35.3
BcaC03g14187 Brassica carinata HOM05D001239 ORTHO05D011709 8.6e-09 65.9 79 50.6
BcaB04g19483 Brassica carinata HOM05D004425 ORTHO05D005783 1.5e-08 65.1 42 76.2
BolC7t40747H Brassica oleracea HOM05D001239 ORTHO05D027739 1.5e-08 65.1 166 36.7
C04p52150 Brassica napus HOM05D027742 ORTHO05D027054 1.9e-08 64.7 191 33.5
BolC8t49935H Brassica oleracea HOM05D001239 ORTHO05D011709 1.9e-08 64.7 106 42.5
A06p35270 Brassica napus HOM05D000591 ORTHO05D000579 2.5e-08 64.3 72 55.6
BcaC04g22514 Brassica carinata HOM05D001239 ORTHO05D027739 4.3e-08 63.5 148 36.5
A01p18960 Brassica napus HOM05D014076 ORTHO05D021903 4.3e-08 63.5 94 47.9
BcaC03g17089 Brassica carinata HOM05D025306 ORTHO05D011709 7.3e-08 62.8 151 35.8
C03p49160 Brassica napus HOM05D014076 ORTHO05D024532 7.3e-08 62.8 118 39.8
BolC3t17197H Brassica oleracea HOM05D014076 ORTHO05D024532 7.3e-08 62.8 118 39.8
C07p03520 Brassica napus HOM05D001239 ORTHO05D027739 1.2e-07 62.0 148 36.5
BcaC03g15852 Brassica carinata HOM05D004425 ORTHO05D024261 1.6e-07 61.6 73 47.9
C06p15150 Brassica napus HOM05D016815 ORTHO05D020093 2.8e-07 60.8 135 37.0
BolC6t36689H Brassica oleracea HOM05D016815 ORTHO05D020093 2.8e-07 60.8 135 37.0
BcaB03g15929 Brassica carinata HOM05D000496 ORTHO05D000411 6.1e-07 59.7 66 51.5
A03p63670 Brassica napus HOM05D001239 ORTHO05D011709 6.1e-07 59.7 54 59.3
BraA03t15438Z Brassica rapa HOM05D001239 ORTHO05D011709 6.1e-07 59.7 54 59.3
BraA06t25448Z Brassica rapa HOM05D001239 ORTHO05D017499 6.1e-07 59.7 133 35.3
BcaC02g08196 Brassica carinata HOM05D009238 ORTHO05D011709 8.0e-07 59.3 47 68.1
BcaC09g49165 Brassica carinata HOM05D000032 ORTHO05D000925 1.4e-06 58.5 52 57.7
C07p05770 Brassica napus HOM05D001239 ORTHO05D011709 1.4e-06 58.5 50 64.0
BraA03t12194Z Brassica rapa HOM05D009238 ORTHO05D012489 1.8e-06 58.2 89 43.8
C05p23240 Brassica napus HOM05D009238 ORTHO05D021611 2.3e-06 57.8 171 36.8
BolC5t31416H Brassica oleracea HOM05D004425 ORTHO05D005783 2.3e-06 57.8 133 33.1
BcaC08g44422 Brassica carinata HOM05D001239 ORTHO05D017499 3.0e-06 57.4 141 35.5
C05p26970 Brassica napus HOM05D004425 ORTHO05D005783 3.0e-06 57.4 110 40.0
A01p06600 Brassica napus HOM05D004425 ORTHO05D024261 4.0e-06 57.0 58 50.0
BolC1t05632H Brassica oleracea HOM05D014076 ORTHO05D021903 4.0e-06 57.0 86 45.3
BcaC06g33595 Brassica carinata HOM05D000003 ORTHO05D000006 5.2e-06 56.6 157 31.8
BolC2t08494H Brassica oleracea HOM05D009238 ORTHO05D012489 5.2e-06 56.6 62 54.8
BcaB03g16420 Brassica carinata HOM05D004425 ORTHO05D005783 8.9e-06 55.8 118 40.7


User provided reference genes

Program Settings