Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g32821 Brassica carinata HOM05D001038 ORTHO05D039878 1.8e-33 145.2 68 100.0
BcaC05g27501 Brassica carinata HOM05D001038 ORTHO05D032287 6.8e-20 100.1 62 74.2
BcaB05g21586 Brassica carinata HOM05D001038 ORTHO05D000395 4.4e-19 97.4 66 68.2
BcaC08g43867 Brassica carinata HOM05D001038 ORTHO05D032356 9.7e-19 96.3 67 68.7
C06p26270 Brassica napus HOM05D001038 ORTHO05D017617 2.2e-18 95.1 62 67.7
C06p12520 Brassica napus HOM05D001038 ORTHO05D032356 3.7e-18 94.4 66 68.2
BolC6t36405H Brassica oleracea HOM05D001038 ORTHO05D032356 3.7e-18 94.4 66 68.2
BolC6t37789H Brassica oleracea HOM05D001038 ORTHO05D039878 8.3e-18 93.2 61 67.2
BcaC09g51573 Brassica carinata HOM05D001038 ORTHO05D000395 1.2e-16 89.4 66 63.6
C05p42760 Brassica napus HOM05D001038 ORTHO05D031796 5.9e-16 87.0 67 62.7
BolC2t07874H Brassica oleracea HOM05D001038 ORTHO05D010946 5.9e-16 87.0 66 60.6
BcaC05g28246 Brassica carinata HOM05D001038 ORTHO05D031796 7.7e-16 86.7 66 63.6
C09p22250 Brassica napus HOM05D001038 ORTHO05D000395 7.7e-16 86.7 66 60.6
BolC1t03990H Brassica oleracea HOM05D001038 ORTHO05D000395 1.0e-15 86.3 66 60.6
BcaB07g31666 Brassica carinata HOM05D001038 ORTHO05D000395 5.5e-14 80.5 66 59.1
BcaB06g28542 Brassica carinata HOM05D001038 ORTHO05D000395 2.7e-13 78.2 60 56.7
BcaB07g33657 Brassica carinata HOM05D000428 ORTHO05D000582 1.4e-12 75.9 66 50.0
BcaB01g02416 Brassica carinata HOM05D011654 ORTHO05D010946 5.2e-12 73.9 66 53.0
BcaB06g27191 Brassica carinata HOM05D001038 ORTHO05D010946 5.2e-12 73.9 62 56.5
BcaC06g33888 Brassica carinata HOM05D001038 ORTHO05D017617 2.0e-11 72.0 66 54.5
BcaB02g11035 Brassica carinata HOM05D001038 ORTHO05D000395 7.5e-11 70.1 62 53.2
C05p38680 Brassica napus HOM05D001038 ORTHO05D000395 1.1e-09 66.2 66 48.5
BolC5t32608H Brassica oleracea HOM05D001038 ORTHO05D000395 1.1e-09 66.2 66 48.5
BcaB06g26967 Brassica carinata HOM05D001038 ORTHO05D000395 1.4e-09 65.9 61 52.5
C07p35880 Brassica napus HOM05D001038 ORTHO05D017617 1.8e-09 65.5 41 68.3
BolC2t11347H Brassica oleracea HOM05D001038 ORTHO05D000395 1.8e-09 65.5 58 48.3
BcaB08g35558 Brassica carinata HOM05D001038 ORTHO05D000395 2.4e-09 65.1 44 63.6
BcaB05g23741 Brassica carinata HOM05D000373 ORTHO05D000395 5.4e-09 63.9 62 50.0
C03p52320 Brassica napus HOM05D001038 ORTHO05D032864 7.0e-09 63.5 42 66.7
BcaC01g05566 Brassica carinata HOM05D023990 ORTHO05D032040 1.2e-08 62.8 62 45.2
BolC9t59719H Brassica oleracea HOM05D001038 ORTHO05D032864 2.7e-08 61.6 39 66.7
Thhalv10002173m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 4.5e-08 60.8 64 46.9
BcaC05g27866 Brassica carinata HOM05D001038 ORTHO05D000395 7.7e-08 60.1 54 50.0
BcaB04g17881 Brassica carinata HOM05D002078 ORTHO05D093772 6.6e-07 57.0 31 77.4
C02p31700 Brassica napus HOM05D000311 ORTHO05D000183 1.5e-06 55.8 67 41.8
BraA05t20300Z Brassica rapa HOM05D001038 ORTHO05D000395 3.3e-06 54.7 63 41.3
Thhalv10009967m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 3.3e-06 54.7 49 53.1
BcaC09g49302 Brassica carinata HOM05D034069 ORTHO05D032851 4.2e-06 54.3 41 56.1


User provided reference genes

Program Settings