Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g32044 Brassica carinata HOM05D005865 ORTHO05D006867 1.9e-289 998.4 505 100.0
BraA06t24751Z Brassica rapa HOM05D005865 ORTHO05D006867 9.4e-252 873.2 508 88.0
Sp1g18130 Schrenkiella parvula HOM05D005865 ORTHO05D006867 5.7e-249 864.0 508 86.0
BolC5t30602H Brassica oleracea HOM05D005865 ORTHO05D006867 1.7e-248 862.4 506 87.2
Thhalv10007426m.g Eutrema salsugineum HOM05D005865 ORTHO05D006867 1.7e-245 852.4 508 84.4
BcaC05g25951 Brassica carinata HOM05D005865 ORTHO05D006867 5.0e-245 850.9 504 86.1
C05p19010 Brassica napus HOM05D005865 ORTHO05D006867 2.5e-244 848.6 504 85.9
CARHR020860 Cardamine hirsuta HOM05D005865 ORTHO05D006867 1.7e-240 835.9 508 81.9
AL1G33330 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 3.9e-237 824.7 508 80.9
BraA07t29307Z Brassica rapa HOM05D005865 ORTHO05D006867 1.9e-236 822.4 515 81.9
Carub.0001s1989 Capsella rubella HOM05D005865 ORTHO05D006867 2.8e-235 818.5 508 81.3
AT1G20410 Arabidopsis thaliana HOM05D005865 ORTHO05D006867 3.1e-234 815.1 506 81.0
C07p23040 Brassica napus HOM05D005865 ORTHO05D006867 3.4e-233 811.6 506 82.4
BolC7t42845H Brassica oleracea HOM05D005865 ORTHO05D006867 3.4e-233 811.6 506 82.4
BcaNung03380 Brassica carinata HOM05D005865 ORTHO05D006867 2.5e-228 795.4 506 81.4
A07p15800 Brassica napus HOM05D005865 ORTHO05D006867 4.7e-227 791.2 530 77.7
AL1G33260 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 1.9e-220 769.2 506 77.5
Aa31LG7G4730 Aethionema arabicum HOM05D005865 ORTHO05D006867 2.5e-220 768.8 506 77.1
THA.LOC104813767 Tarenaya hassleriana HOM05D005865 ORTHO05D006867 1.1e-186 657.1 495 66.7
A06p16480 Brassica napus HOM05D005865 ORTHO05D006867 9.3e-183 644.0 359 91.1
TAR381G0423 Trochodendron aralioides HOM05D005865 ORTHO05D006867 6.5e-152 541.6 530 55.8
Actinidia37960 Actinidia chinensis HOM05D005865 ORTHO05D006867 3.2e-151 539.3 537 53.3
GSVIVG01008710001 Vitis vinifera HOM05D005865 ORTHO05D006867 1.6e-150 537.0 524 56.1
Thecc.08G054600 Theobroma cacao HOM05D005865 ORTHO05D006867 8.0e-150 534.6 547 54.5
Potri.005G247500 Populus trichocarpa HOM05D005865 ORTHO05D006867 5.2e-149 531.9 536 53.5
Cfa014029 Carpinus fangiana HOM05D005865 ORTHO05D006867 6.7e-149 531.6 514 55.6
BcaB03g14323 Brassica carinata HOM05D005865 ORTHO05D006867 1.1e-148 530.8 279 91.4
Ah.00g000500 Amaranthus hybridus HOM05D005865 ORTHO05D006867 4.4e-148 528.9 497 55.3
Ciclev10000742m.g Citrus clementina HOM05D005865 ORTHO05D006867 4.4e-148 528.9 554 52.3
Aqoxy6G01868 Aquilegia oxysepala HOM05D005865 ORTHO05D006867 2.8e-147 526.2 509 54.4
Atru.chr13.184 Acer truncatum HOM05D005865 ORTHO05D006867 3.7e-147 525.8 507 55.0
Gohir.A05G181600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 3.1e-146 522.7 507 54.8
Gohir.D05G184600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 3.1e-146 522.7 508 54.9
PSO541G4963 Papaver somniferum HOM05D005865 ORTHO05D006867 4.1e-146 522.3 542 52.6
Gorai.009G190100 Gossypium raimondii HOM05D005865 ORTHO05D006867 2.7e-145 519.6 508 54.9
HanXRQChr14g0428991 Helianthus annuus HOM05D005865 ORTHO05D006867 3.5e-145 519.2 514 53.3
Nn5g30889 Nelumbo nucifera HOM05D005865 ORTHO05D006867 3.5e-145 519.2 518 54.6
Hma1.2p1_1100F.1_g257160 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 7.7e-145 518.1 520 54.0
PGR031G3425 Punica granatum HOM05D005865 ORTHO05D006867 7.7e-145 518.1 537 54.2
Lsat_1_v5_gn_2_5921 Lactuca sativa HOM05D005865 ORTHO05D006867 1.0e-144 517.7 548 52.2
CANSAT56G1424 Cannabis sativa HOM05D005865 ORTHO05D006867 6.5e-144 515.0 535 51.0
Lalb_Chr03g0033591 Lupinus albus HOM05D005865 ORTHO05D006867 1.5e-143 513.8 487 55.0
PSO675G0073 Papaver somniferum HOM05D005865 ORTHO05D006867 1.9e-143 513.5 523 52.4
Migut.N03192 Erythranthe guttata HOM05D005865 ORTHO05D006867 4.2e-143 512.3 519 55.5
DCAR_013898 Daucus carota HOM05D005865 ORTHO05D006867 5.5e-143 511.9 552 51.3
CsaV3_4G037060 Cucumis sativus L. HOM05D005865 ORTHO05D006867 9.4e-143 511.1 486 56.6
Hund05136 Selenicereus undatus HOM05D005865 ORTHO05D006867 2.1e-142 510.0 502 54.0
MSTRG.1133 Avicennia marina HOM05D005865 ORTHO05D006867 3.6e-142 509.2 529 52.2
RcHm_v2.0_Chr6g0303901 Rosa chinensis HOM05D005865 ORTHO05D006867 3.6e-142 509.2 523 53.0
Peaxi162Scf00174g01413 Petunia axillaris HOM05D005865 ORTHO05D006867 1.8e-141 506.9 543 50.1
Rhsim07G0252700 Rhododendron simsii HOM05D005865 ORTHO05D006867 2.3e-141 506.5 585 49.1
Sopen04g035760 Solanum pennellii HOM05D005865 ORTHO05D006867 2.3e-141 506.5 529 51.6
CiPaw.07G141800 Carya illinoinensis HOM05D005865 ORTHO05D006867 5.2e-141 505.4 535 52.0
Solyc04g082130.4 Solanum lycopersicum HOM05D005865 ORTHO05D006867 5.2e-141 505.4 526 51.5
SGA_v2.0_scaffold25G11198 Striga asiatica HOM05D005865 ORTHO05D006867 5.2e-141 505.4 543 51.9
CSS0021595 Camellia sinensis var. sinensis HOM05D005865 ORTHO05D006867 2.0e-140 503.4 515 53.8
arahy.Tifrunner.gnm1.ann1.88Q24L Arachis hypogaea HOM05D005865 ORTHO05D006867 2.6e-140 503.1 523 53.0
PGSC0003DMG400009964 Solanum tuberosum HOM05D005865 ORTHO05D006867 3.4e-140 502.7 526 51.7
VMungo0647G1107 Vigna mungo HOM05D005865 ORTHO05D006867 4.4e-140 502.3 502 53.8
Eucgr.F03532 Eucalyptus grandis HOM05D005865 ORTHO05D006867 7.5e-140 501.5 535 51.6
Duzib093G0711 Durio zibethinus HOM05D005865 ORTHO05D006867 9.8e-140 501.1 508 54.9
Sed0014892 Sechium edule HOM05D005865 ORTHO05D006867 1.7e-139 500.4 495 53.3
Psat0s4771g0080 Pisum sativum HOM05D005865 ORTHO05D006867 2.8e-139 499.6 486 53.9
Phvul.001G001600 Phaseolus vulgaris HOM05D005865 ORTHO05D006867 1.1e-138 497.7 492 54.5
MD08G1005300 Malus domestica HOM05D005865 ORTHO05D006867 1.8e-138 496.9 514 52.5
Lj5g0011422 Lotus japonicus HOM05D005865 ORTHO05D006867 2.4e-138 496.5 501 54.1
arahy.Tifrunner.gnm1.ann1.YCE7MW Arachis hypogaea HOM05D005865 ORTHO05D006867 4.1e-138 495.7 487 55.0
ClCG05G015260 Citrullus lanatus HOM05D005865 ORTHO05D006867 4.1e-138 495.7 576 48.8
Cc10_g00980 Coffea canephora HOM05D005865 ORTHO05D006867 7.0e-138 495.0 560 48.9
Glyma.14G222900 Glycine max HOM05D005865 ORTHO05D006867 2.9e-136 489.6 494 52.4
SalBow6G0433 Salvia bowleyana HOM05D005865 ORTHO05D006867 8.5e-136 488.0 488 54.7
vmacro04388 Vaccinium macrocarpon HOM05D005865 ORTHO05D006867 1.5e-135 487.3 612 47.2
ECA238G0937 Erigeron canadensis HOM05D005865 ORTHO05D006867 3.2e-135 486.1 515 52.4
TWI36G0296 Tripterygium wilfordii HOM05D005865 ORTHO05D006867 4.2e-135 485.7 496 53.4
Manes.18G007801 Manihot esculenta HOM05D005865 ORTHO05D006867 2.6e-132 476.5 511 51.9
Medtr1g026400 Medicago truncatula HOM05D005865 ORTHO05D006867 8.3e-131 471.5 486 51.4
Prupe.1G357400 Prunus persica HOM05D005865 ORTHO05D006867 1.4e-130 470.7 408 59.6
Os04g0561700 Oryza sativa ssp. japonica HOM05D005865 ORTHO05D006867 2.4e-130 469.9 516 49.4
CAN.G311.92 Capsicum annuum HOM05D005865 ORTHO05D006867 9.2e-130 468.0 467 53.7
FAN27G0680 Fragaria x ananassa HOM05D005865 ORTHO05D006867 2.7e-129 466.5 577 48.0
ATR0665G248 Amborella trichopoda HOM05D005865 ORTHO05D006867 4.5e-129 465.7 532 49.6
CDE02G0067 Ceratophyllum demersum HOM05D005865 ORTHO05D006867 3.8e-128 462.6 494 50.8
HPP92_014547 Vanilla planifolia HOM05D005865 ORTHO05D006867 1.5e-127 460.7 531 49.3
Sabra05G0191400 Salix brachista HOM05D005865 ORTHO05D006867 9.5e-127 458.0 556 47.8
COL.COLO4_26054 Corchorus olitorius HOM05D005865 ORTHO05D006867 2.1e-126 456.8 397 59.7
Lj4A15G44 Lonicera japonica HOM05D005865 ORTHO05D006867 6.1e-126 455.3 462 53.5
Zm00001eb074060 Zea mays HOM05D005865 ORTHO05D006867 1.0e-125 454.5 526 48.9
Nitab4.5_0000588g0310 Nicotiana tabacum HOM05D005865 ORTHO05D006867 2.2e-123 446.8 500 48.2
unitig_747.g21718 Utricularia gibba HOM05D005865 ORTHO05D006867 2.0e-121 440.3 536 47.8
FvH4_2g37810 Fragaria vesca HOM05D005865 ORTHO05D006867 1.3e-120 437.6 462 52.6
MELO3C017004.2 Cucumis melo HOM05D005865 ORTHO05D006867 2.3e-120 436.8 506 49.8
QL02p013522 Quercus lobata HOM05D005865 ORTHO05D006867 4.0e-117 426.0 455 51.2
AUR62013839 Chenopodium quinoa HOM05D005865 ORTHO05D006867 3.4e-116 422.9 498 49.2
Dinv31911 Davidia involucrata HOM05D005865 ORTHO05D006867 5.8e-116 422.2 486 48.4
A07p15700 Brassica napus HOM05D005865 ORTHO05D006867 1.9e-111 407.1 213 91.5
Ca_13490_v3 Cicer arietinum L. HOM05D005865 ORTHO05D006867 7.3e-111 405.2 310 65.8
Sc15g0004650 Simmondsia chinensis HOM05D005865 ORTHO05D006867 2.0e-108 397.1 384 57.3
Pp3c20_10980 Physcomitrium patens HOM05D005865 ORTHO05D006867 6.4e-107 392.1 551 42.3
AagrBONN_evm.TU.Sc2ySwM_344.4811 Anthoceros agrestis HOM05D005865 ORTHO05D006867 4.1e-106 389.4 530 42.1
Hma1.2p1_1100F.1_g257170 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 7.1e-106 388.7 251 72.9
Mapoly0006s0010 Marchantia polymorpha HOM05D005865 ORTHO05D006867 1.4e-98 364.4 519 41.4
EL10Ac1g02030 Beta vulgaris HOM05D005865 ORTHO05D006867 7.8e-89 332.0 429 45.7
BcaC07g42576 Brassica carinata HOM05D005865 ORTHO05D006867 1.3e-88 331.3 250 72.0
SMO364G0210 Selaginella moellendorffii HOM05D005865 ORTHO05D006867 2.9e-83 313.5 252 60.3
Haze_22735 Corylus avellana HOM05D005865 ORTHO05D006867 1.4e-82 311.2 266 61.3
AUR62036767 Chenopodium quinoa HOM05D005865 ORTHO05D006867 1.6e-81 307.8 364 48.9
A07p15690 Brassica napus HOM05D005865 ORTHO05D006867 1.8e-80 304.3 212 76.4
SEGI_14934 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 1.3e-78 298.1 227 63.9
CBR_g81579 Chara braunii HOM05D005865 ORTHO05D006867 8.1e-70 268.9 447 35.8
BcaB03g14322 Brassica carinata HOM05D005865 ORTHO05D006867 2.2e-51 207.6 163 70.6
MCO16G112 Micromonas commoda HOM05D005865 ORTHO05D006867 1.9e-50 204.5 244 43.0
PRCOL_00003715 Prasinoderma coloniale HOM05D005865 ORTHO05D006867 5.1e-48 196.4 484 29.5
Cpa.g.sc26.238 Carica papaya HOM05D005865 ORTHO05D006867 7.7e-44 182.6 135 67.4
Cpa.g.sc26.237 Carica papaya HOM05D005865 ORTHO05D006867 3.7e-38 163.7 236 42.8
MELO3C035627.2 Cucumis melo HOM05D005865 ORTHO05D006867 1.1e-34 152.1 161 50.3
MD15G1004800 Malus domestica HOM05D005865 ORTHO05D006867 8.2e-30 136.0 106 64.2
FAN15G0850 Fragaria x ananassa HOM05D005865 ORTHO05D006867 5.0e-27 126.7 242 36.8
Oeu025004.1 Olea europaea HOM05D005865 ORTHO05D006867 6.1e-25 119.8 190 34.2
Cre12.g506900 Chlamydomonas reinhardtii HOM05D005865 ORTHO05D006867 2.6e-23 114.4 319 28.8
SHI04100 Sapria himalayana HOM05D005865 ORTHO05D006867 6.5e-19 99.8 193 34.2
Rhsim11G0079600 Rhododendron simsii HOM05D005865 ORTHO05D006867 1.9e-18 98.2 102 48.0
MELO3C032646.2 Cucumis melo HOM05D005865 ORTHO05D006867 2.6e-15 87.8 105 45.7
Hma1.2p1_1100F.1_g257120 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 3.7e-14 84.0 148 36.5
FAN20G0402 Fragaria x ananassa HOM05D005865 ORTHO05D006867 4.9e-14 83.6 179 35.8
Cpa.g.sc26.239 Carica papaya HOM05D005865 ORTHO05D006867 1.1e-13 82.4 41 90.2
SEGI_13350 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 2.4e-13 81.3 147 36.7
MELO3C035121.2 Cucumis melo HOM05D005865 ORTHO05D000044 1.2e-12 79.0 105 41.0
EL10Ac1g02029 Beta vulgaris HOM05D056011 ORTHO05D006867 1.0e-11 75.9 39 87.2
SHI04101 Sapria himalayana HOM05D005865 ORTHO05D006867 1.7e-11 75.1 154 35.7
Rhsim09G0051200 Rhododendron simsii HOM05D005337 ORTHO05D006567 5.0e-11 73.6 139 34.5
MELO3C031410.2 Cucumis melo HOM05D005865 ORTHO05D006867 1.0e-08 65.9 111 36.0


User provided reference genes

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