Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g29163 Brassica carinata HOM05D005421 ORTHO05D031077 2.7e-50 202.6 189 100.0
BcaC01g05387 Brassica carinata HOM05D005421 ORTHO05D007601 3.9e-17 92.4 189 76.2
C03p27110 Brassica napus HOM05D005421 ORTHO05D007601 1.5e-16 90.5 190 75.3
BolC3t15092H Brassica oleracea HOM05D005421 ORTHO05D007601 1.5e-16 90.5 190 75.3
BcaB01g03524 Brassica carinata HOM05D005421 ORTHO05D007601 8.2e-15 84.7 192 72.4
Aa31LG3G1470 Aethionema arabicum HOM05D005421 ORTHO05D007601 1.8e-14 83.6 207 66.7
THA.LOC104805907 Tarenaya hassleriana HOM05D005421 ORTHO05D007601 1.0e-09 67.8 205 58.5
BcaB06g29165 Brassica carinata HOM05D011401 ORTHO05D018605 3.9e-09 65.9 66 63.6
Cpa.g.sc48.125 Carica papaya HOM05D005421 ORTHO05D007601 8.7e-09 64.7 59 67.8
Sp4g22980 Schrenkiella parvula HOM05D005421 ORTHO05D007601 2.5e-08 63.2 30 96.7
A03p22860 Brassica napus HOM05D005421 ORTHO05D007601 3.3e-08 62.8 30 96.7
BraA03t11510Z Brassica rapa HOM05D005421 ORTHO05D007601 3.3e-08 62.8 30 96.7
SGA_v2.0_scaffold4G01947 Striga asiatica HOM05D005421 ORTHO05D007601 3.3e-08 62.8 192 49.5
AL4G38520 Arabidopsis lyrata HOM05D005421 ORTHO05D007601 4.3e-08 62.4 29 96.6
TWI12G1149 Tripterygium wilfordii HOM05D005421 ORTHO05D007601 4.3e-08 62.4 200 64.5
A04p31080 Brassica napus HOM05D005421 ORTHO05D007601 7.4e-08 61.6 189 68.8
C04p68470 Brassica napus HOM05D005421 ORTHO05D007601 7.4e-08 61.6 189 63.5
BraA04t18563Z Brassica rapa HOM05D005421 ORTHO05D007601 7.4e-08 61.6 30 93.3
BcaB06g29166 Brassica carinata HOM05D005421 ORTHO05D007601 9.7e-08 61.2 189 67.2
BcaC02g07328 Brassica carinata HOM05D005421 ORTHO05D007601 9.7e-08 61.2 189 63.5
Actinidia35540 Actinidia chinensis HOM05D005421 ORTHO05D007601 1.6e-07 60.5 28 96.4
PSO407G0035 Papaver somniferum HOM05D005421 ORTHO05D007601 1.6e-07 60.5 28 96.4
PSO170G1114 Papaver somniferum HOM05D005421 ORTHO05D007601 2.2e-07 60.1 28 92.9
Aqoxy2G02863 Aquilegia oxysepala HOM05D005421 ORTHO05D007601 2.8e-07 59.7 27 100.0
CSS0007056 Camellia sinensis var. sinensis HOM05D005421 ORTHO05D007601 2.8e-07 59.7 28 92.9
CSS0046729 Camellia sinensis var. sinensis HOM05D005421 ORTHO05D007601 2.8e-07 59.7 28 92.9
CARHR135760 Cardamine hirsuta HOM05D005421 ORTHO05D007601 2.8e-07 59.7 29 89.7
COL.COLO4_26689 Corchorus olitorius HOM05D005421 ORTHO05D007601 2.8e-07 59.7 28 92.9
TWI56G0052 Tripterygium wilfordii HOM05D005421 ORTHO05D007601 2.8e-07 59.7 201 64.2
AT2G40650 Arabidopsis thaliana HOM05D005421 ORTHO05D007601 4.8e-07 58.9 29 89.7
Ciclev10001489m.g Citrus clementina HOM05D005421 ORTHO05D007601 6.3e-07 58.5 28 89.3
Duzib150G0691 Durio zibethinus HOM05D005421 ORTHO05D007601 6.3e-07 58.5 28 89.3
Nn4g25707 Nelumbo nucifera HOM05D005421 ORTHO05D007601 6.3e-07 58.5 28 92.9
BcaB06g29159 Brassica carinata HOM05D005421 ORTHO05D031077 1.1e-06 57.8 30 90.0
BolC4t28347H Brassica oleracea HOM05D005421 ORTHO05D007601 1.1e-06 57.8 228 61.0
CANSAT54G2596 Cannabis sativa HOM05D005421 ORTHO05D007601 1.1e-06 57.8 28 92.9
Carub.0004s2294 Capsella rubella HOM05D005421 ORTHO05D007601 1.1e-06 57.8 28 89.3
Dinv24409 Davidia involucrata HOM05D005421 ORTHO05D007601 1.1e-06 57.8 28 92.9
HanXRQChr01g0011821 Helianthus annuus HOM05D005421 ORTHO05D007601 1.1e-06 57.8 27 92.6
Lsat_1_v5_gn_7_73220 Lactuca sativa HOM05D005421 ORTHO05D007601 1.1e-06 57.8 27 92.6
MBI18_g04564_MAGBIO Magnolia biondii HOM05D005421 ORTHO05D007601 1.1e-06 57.8 28 89.3
MD12G1209800 Malus domestica HOM05D005421 ORTHO05D007601 1.1e-06 57.8 28 92.9
PGR031G1007 Punica granatum HOM05D005421 ORTHO05D007601 1.1e-06 57.8 26 100.0
Rhsim11G0092200 Rhododendron simsii HOM05D005421 ORTHO05D007601 1.1e-06 57.8 27 92.6
vmacro01533 Vaccinium macrocarpon HOM05D005421 ORTHO05D007601 1.1e-06 57.8 27 92.6
ATR0693G223 Amborella trichopoda HOM05D005421 ORTHO05D031077 1.4e-06 57.4 27 92.6
Cc02_g34540 Coffea canephora HOM05D005421 ORTHO05D007601 1.4e-06 57.4 27 92.6
Lj5g0011296 Lotus japonicus HOM05D005421 ORTHO05D007601 1.8e-06 57.0 27 96.3
Atru.chr2.115 Acer truncatum HOM05D005421 ORTHO05D007601 2.4e-06 56.6 27 88.9
AagrBONN_evm.TU.Sc2ySwM_117.208 Anthoceros agrestis HOM05D005421 ORTHO05D007601 2.4e-06 56.6 26 96.2
Ca_10154_v3 Cicer arietinum L. HOM05D005421 ORTHO05D007601 2.4e-06 56.6 26 96.2
Ca_29832_v3 Cicer arietinum L. HOM05D005421 ORTHO05D007601 2.4e-06 56.6 26 96.2
COL.COLO4_07356 Corchorus olitorius HOM05D005421 ORTHO05D007601 2.4e-06 56.6 27 88.9
Eucgr.H03270 Eucalyptus grandis HOM05D005421 ORTHO05D007601 2.4e-06 56.6 26 96.2
Mapoly0138s0022 Marchantia polymorpha HOM05D005421 ORTHO05D007601 2.4e-06 56.6 26 96.2
Peaxi162Scf00037g01816 Petunia axillaris HOM05D005421 ORTHO05D007601 2.4e-06 56.6 26 96.2
SalBow1G5723 Salvia bowleyana HOM05D005421 ORTHO05D007601 2.4e-06 56.6 28 89.3
Hund07118 Selenicereus undatus HOM05D005421 ORTHO05D007601 2.4e-06 56.6 27 88.9
PGSC0003DMG400024728 Solanum tuberosum HOM05D005421 ORTHO05D007601 2.4e-06 56.6 26 96.2
TAR636G1951 Trochodendron aralioides HOM05D005421 ORTHO05D007601 2.4e-06 56.6 27 92.6
HPP92_020232 Vanilla planifolia HOM05D005421 ORTHO05D007601 3.1e-06 56.2 28 89.3
Haze_04100 Corylus avellana HOM05D005421 ORTHO05D007601 4.1e-06 55.8 61 59.0
Migut.B01005 Erythranthe guttata HOM05D005421 ORTHO05D007601 4.1e-06 55.8 29 79.3
FvH4_6g07010 Fragaria vesca HOM05D005421 ORTHO05D007601 4.1e-06 55.8 25 100.0
FAN05G0688 Fragaria x ananassa HOM05D005421 ORTHO05D007601 4.1e-06 55.8 25 100.0
Pp3c1_35390 Physcomitrium patens HOM05D005421 ORTHO05D007601 4.1e-06 55.8 26 92.3
DCAR_004503 Daucus carota HOM05D005421 ORTHO05D007601 5.3e-06 55.5 25 100.0
Glyma.10G149900 Glycine max HOM05D005421 ORTHO05D007601 5.3e-06 55.5 26 92.3
Oeu045895.1 Olea europaea HOM05D005421 ORTHO05D007601 5.3e-06 55.5 28 89.3
THA.LOC104820733 Tarenaya hassleriana HOM05D005421 ORTHO05D007601 5.3e-06 55.5 57 63.2
FAN02G3486 Fragaria x ananassa HOM05D005421 ORTHO05D007601 9.0e-06 54.7 25 96.0
Psat6g151720 Pisum sativum HOM05D005421 ORTHO05D007601 9.0e-06 54.7 25 96.0


User provided reference genes

Program Settings