Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g28730 Brassica carinata HOM05D000965 ORTHO05D000842 3.4e-89 331.6 168 100.0
BcaB06g28725 Brassica carinata HOM05D000965 ORTHO05D000842 4.6e-70 268.1 181 80.7
A04p26130 Brassica napus HOM05D000965 ORTHO05D000842 9.3e-63 243.8 162 71.6
BolC4t27822H Brassica oleracea HOM05D000965 ORTHO05D000842 7.4e-60 234.2 196 62.2
BraA04t18116Z Brassica rapa HOM05D000965 ORTHO05D000842 7.4e-60 234.2 197 59.9
C04p63510 Brassica napus HOM05D000965 ORTHO05D000842 4.5e-57 224.9 197 58.4
BcaC02g07782 Brassica carinata HOM05D000965 ORTHO05D000842 4.3e-52 208.4 178 61.2
AT2G34030 Arabidopsis thaliana HOM05D000965 ORTHO05D000842 1.1e-44 183.7 191 51.8
CARHR128100 Cardamine hirsuta HOM05D000965 ORTHO05D000842 2.8e-43 179.1 190 49.5
Thhalv10016396m.g Eutrema salsugineum HOM05D000965 ORTHO05D000842 3.7e-43 178.7 190 50.0
Sp4g16370 Schrenkiella parvula HOM05D000965 ORTHO05D000842 4.8e-43 178.3 190 48.9
C03p22140 Brassica napus HOM05D000965 ORTHO05D000842 1.2e-41 173.7 190 48.9
BolC3t14598H Brassica oleracea HOM05D000965 ORTHO05D000842 1.2e-41 173.7 190 48.9
AL4G29900 Arabidopsis lyrata HOM05D000965 ORTHO05D000842 1.6e-41 173.3 190 47.4
BcaB01g03908 Brassica carinata HOM05D000965 ORTHO05D000842 1.6e-41 173.3 192 47.9
BcaC01g05812 Brassica carinata HOM05D000965 ORTHO05D000842 2.6e-41 172.6 190 48.4
A03p18990 Brassica napus HOM05D000965 ORTHO05D000842 3.5e-41 172.2 190 48.4
BraA03t11157Z Brassica rapa HOM05D000965 ORTHO05D000842 3.5e-41 172.2 190 48.4
Carub.0004s1566 Capsella rubella HOM05D000965 ORTHO05D000842 6.5e-40 167.9 190 45.3
Sp1g24950 Schrenkiella parvula HOM05D000965 ORTHO05D000842 1.5e-39 166.8 190 45.3
BcaB07g32481 Brassica carinata HOM05D000965 ORTHO05D000842 9.4e-39 164.1 191 45.5
BraA09t39246Z Brassica rapa HOM05D000965 ORTHO05D000842 1.6e-38 163.3 191 46.1
A09p37380 Brassica napus HOM05D000965 ORTHO05D000842 3.6e-38 162.2 199 44.7
BcaC05g26913 Brassica carinata HOM05D000965 ORTHO05D000842 1.0e-37 160.6 199 44.2
C05p27690 Brassica napus HOM05D000965 ORTHO05D000842 1.0e-37 160.6 199 44.2
BolC5t31488H Brassica oleracea HOM05D000965 ORTHO05D000842 1.0e-37 160.6 199 44.2
CARHR028210 Cardamine hirsuta HOM05D000965 ORTHO05D000842 1.4e-37 160.2 190 44.7
Aa31LG9G13840 Aethionema arabicum HOM05D000965 ORTHO05D000842 4.0e-37 158.7 192 44.8
Aa31LG6G11480 Aethionema arabicum HOM05D000965 ORTHO05D000842 3.3e-36 155.6 192 41.1
AL4G29910 Arabidopsis lyrata HOM05D000965 ORTHO05D000842 5.7e-36 154.8 195 46.7
AT2G34020 Arabidopsis thaliana HOM05D000965 ORTHO05D000842 7.5e-36 154.5 223 39.9
Thhalv10007172m.g Eutrema salsugineum HOM05D000965 ORTHO05D000842 9.7e-36 154.1 188 44.1
AL1G42720 Arabidopsis lyrata HOM05D000965 ORTHO05D000842 1.7e-35 153.3 187 43.3
Aa31LG6G11490 Aethionema arabicum HOM05D000965 ORTHO05D000842 2.4e-34 149.4 190 39.5
AT1G29025 Arabidopsis thaliana HOM05D000965 ORTHO05D000842 4.1e-34 148.7 188 42.0
Aa31LG6G11440 Aethionema arabicum HOM05D000965 ORTHO05D000842 1.2e-33 147.1 181 43.6
AT1G29020 Arabidopsis thaliana HOM05D000965 ORTHO05D000842 1.6e-33 146.7 182 43.4
Carub.0001s2720 Capsella rubella HOM05D000965 ORTHO05D000842 3.5e-33 145.6 179 43.6
CARHR028220 Cardamine hirsuta HOM05D000965 ORTHO05D000842 1.7e-32 143.3 191 42.4
Aa31LG6G11450 Aethionema arabicum HOM05D000965 ORTHO05D000842 6.5e-32 141.4 189 42.3
Aa31LG9G13930 Aethionema arabicum HOM05D000965 ORTHO05D000842 8.5e-32 141.0 183 42.6
AL1G42710 Arabidopsis lyrata HOM05D000965 ORTHO05D000842 3.2e-31 139.0 182 41.8
Carub.0001s2721 Capsella rubella HOM05D000965 ORTHO05D000842 6.1e-30 134.8 188 38.8
CARHR028230 Cardamine hirsuta HOM05D000965 ORTHO05D000842 1.4e-29 133.7 188 37.8
THA.LOC104820693 Tarenaya hassleriana HOM05D000965 ORTHO05D000842 5.9e-25 118.2 188 36.2
CARHR128110 Cardamine hirsuta HOM05D000965 ORTHO05D000842 2.9e-24 115.9 74 74.3
Thhalv10009350m.g Eutrema salsugineum HOM05D000965 ORTHO05D000842 1.8e-21 106.7 120 44.2
Aa31LG6G11470 Aethionema arabicum HOM05D000965 ORTHO05D000842 7.0e-18 94.7 119 44.5
Aa31LG6G11460 Aethionema arabicum HOM05D000965 ORTHO05D000842 5.0e-16 88.6 156 33.3
HanXRQChr17g0544981 Helianthus annuus HOM05D000965 ORTHO05D000842 3.3e-07 59.3 81 38.3
CiPaw.11G164400 Carya illinoinensis HOM05D000965 ORTHO05D000842 4.3e-07 58.9 131 29.8
PGR031G0785 Punica granatum HOM05D000965 ORTHO05D000842 2.8e-06 56.2 112 32.1
Lsat_1_v5_gn_7_102981 Lactuca sativa HOM05D000965 ORTHO05D000842 6.2e-06 55.1 79 36.7
CiPaw.11G164000 Carya illinoinensis HOM05D000965 ORTHO05D000842 8.0e-06 54.7 129 29.5


User provided reference genes

Program Settings