Gene: AT1G29020
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G29020
- Transcript Identifier AT1G29020.2
- Gene Type Coding gene
- Location Chr1 : 10120497-10122902 : negative
Gene Family Information
- ID HOM05D000965
- #Genes/#Species 620/98
- Phylogenetic origin
- ID ORTHO05D000842
- #Genes/#Species 587/98
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT1G29020.2
- uniprot F4HZU8
Descriptions
- Description Calcium-binding EF-hand family protein
- Computational description Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: root, callus; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT1G29025.1); Has 483 Blast hits to 315 proteins in 72 species: Archae - 8; Bacteria - 1; Metazoa - 61; Fungi - 5; Plants - 330; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0055085 | ISO | PLAZA Homology (enrichment) | transmembrane transport | HOM05D000965 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005509 | IBA IEA | Gene Ontology | calcium ion binding | 1 |
| GO:0005509 | IEA | InterPro | calcium ion binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005576 | ISM | Gene Ontology | extracellular region | |
| GO:0005773 | IDA | GOA Database | vacuole | |
| GO:0005773 | HDA | Gene Ontology | vacuole | 2 |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 24.2.9.1.4 | Solute transport.carrier-mediated transport.CDF superfamily.CaCA family.cation exchanger (NCL/EF-CAX) |