Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g28178 Brassica carinata HOM05D003918 ORTHO05D004494 6.3e-44 180.3 83 100.0
A04p21230 Brassica napus HOM05D003918 ORTHO05D004494 1.6e-39 165.6 78 94.9
BolC4t27242H Brassica oleracea HOM05D003918 ORTHO05D004494 1.6e-39 165.6 78 94.9
BcaC02g08219 Brassica carinata HOM05D003918 ORTHO05D004494 1.4e-38 162.5 78 93.6
C04p57080 Brassica napus HOM05D003918 ORTHO05D004494 1.4e-38 162.5 78 93.6
CARHR120680 Cardamine hirsuta HOM05D003918 ORTHO05D004494 2.5e-37 158.3 77 92.2
Thhalv10017678m.g Eutrema salsugineum HOM05D003918 ORTHO05D004494 5.7e-37 157.1 77 92.2
BcaB03g11846 Brassica carinata HOM05D003918 ORTHO05D004494 7.4e-37 156.8 74 93.2
CANSAT64G2716 Cannabis sativa HOM05D003918 ORTHO05D004494 7.4e-37 156.8 74 93.2
Carub.0004s0873 Capsella rubella HOM05D003918 ORTHO05D004494 7.4e-37 156.8 83 88.0
Thhalv10017487m.g Eutrema salsugineum HOM05D003918 ORTHO05D004494 7.4e-37 156.8 74 93.2
Oeu007724.1 Olea europaea HOM05D003918 ORTHO05D004494 7.4e-37 156.8 74 93.2
AL4G22230 Arabidopsis lyrata HOM05D003918 ORTHO05D004494 9.7e-37 156.4 74 94.6
AT2G27970 Arabidopsis thaliana HOM05D003918 ORTHO05D004494 9.7e-37 156.4 74 94.6
Rhsim13G0101600 Rhododendron simsii HOM05D003918 ORTHO05D004494 9.7e-37 156.4 74 91.9
QL01p014884 Quercus lobata HOM05D003918 ORTHO05D004494 1.3e-36 156.0 74 93.2
C03p85930 Brassica napus HOM05D003918 ORTHO05D004494 1.7e-36 155.6 76 89.5
Dinv16240 Davidia involucrata HOM05D003918 ORTHO05D004494 1.7e-36 155.6 74 93.2
Sp4g10790 Schrenkiella parvula HOM05D003918 ORTHO05D004494 1.7e-36 155.6 74 91.9
Duzib168G2331 Durio zibethinus HOM05D003918 ORTHO05D004494 2.2e-36 155.2 74 91.9
CSS0003214 Camellia sinensis var. sinensis HOM05D003918 ORTHO05D004494 3.7e-36 154.5 74 91.9
CSS0025262 Camellia sinensis var. sinensis HOM05D003918 ORTHO05D004494 3.7e-36 154.5 74 91.9
CSS0028017 Camellia sinensis var. sinensis HOM05D003918 ORTHO05D004494 3.7e-36 154.5 74 91.9
CSS0049251 Camellia sinensis var. sinensis HOM05D003918 ORTHO05D004494 3.7e-36 154.5 74 91.9
CiPaw.13G144800 Carya illinoinensis HOM05D003918 ORTHO05D004494 3.7e-36 154.5 74 91.9
Ca_10762_v3 Cicer arietinum L. HOM05D003918 ORTHO05D004494 3.7e-36 154.5 74 91.9
Cc01_g10200 Coffea canephora HOM05D003918 ORTHO05D004494 3.7e-36 154.5 74 91.9
COL.COLO4_19215 Corchorus olitorius HOM05D003918 ORTHO05D004494 3.7e-36 154.5 74 91.9
DCAR_018757 Daucus carota HOM05D003918 ORTHO05D004494 3.7e-36 154.5 74 91.9
Glyma.11G192100 Glycine max HOM05D003918 ORTHO05D004494 3.7e-36 154.5 74 91.9
Glyma.12G082300 Glycine max HOM05D003918 ORTHO05D004494 3.7e-36 154.5 74 91.9
Gohir.A05G085800 Gossypium hirsutum HOM05D003918 ORTHO05D004494 3.7e-36 154.5 74 91.9
Gohir.D05G087700 Gossypium hirsutum HOM05D003918 ORTHO05D004494 3.7e-36 154.5 74 91.9
Gorai.009G089700 Gossypium raimondii HOM05D003918 ORTHO05D004494 3.7e-36 154.5 74 91.9
Hma1.2p1_0051F.1_g029570 Hydrangea macrophylla HOM05D003918 ORTHO05D004494 3.7e-36 154.5 74 91.9
Lj3g0024072 Lotus japonicus HOM05D003918 ORTHO05D004494 3.7e-36 154.5 74 91.9
Lalb_Chr01g0004631 Lupinus albus HOM05D003918 ORTHO05D004494 3.7e-36 154.5 74 91.9
MBI17_g16530_MAGBIO Magnolia biondii HOM05D003918 ORTHO05D004494 3.7e-36 154.5 76 89.5
Medtr4g057040 Medicago truncatula HOM05D003918 ORTHO05D004494 3.7e-36 154.5 74 91.9
Phvul.011G086900 Phaseolus vulgaris HOM05D003918 ORTHO05D004494 3.7e-36 154.5 74 91.9
Sc21g0004230 Simmondsia chinensis HOM05D003918 ORTHO05D004494 3.7e-36 154.5 74 91.9
Sc21g0004490 Simmondsia chinensis HOM05D003918 ORTHO05D004494 3.7e-36 154.5 74 91.9
Thecc.09G297000 Theobroma cacao HOM05D003918 ORTHO05D004494 3.7e-36 154.5 74 91.9
TWI79G0503 Tripterygium wilfordii HOM05D003918 ORTHO05D004494 3.7e-36 154.5 74 91.9
TWI79G0939 Tripterygium wilfordii HOM05D003918 ORTHO05D004494 3.7e-36 154.5 74 91.9
HPP92_026243 Vanilla planifolia HOM05D003918 ORTHO05D004494 3.7e-36 154.5 74 91.9
BcaC01g00919 Brassica carinata HOM05D003918 ORTHO05D004494 4.8e-36 154.1 74 90.5
A08p17020 Brassica napus HOM05D003918 ORTHO05D004494 4.8e-36 154.1 74 90.5
BraA08t33664Z Brassica rapa HOM05D003918 ORTHO05D004494 4.8e-36 154.1 74 90.5
HanXRQChr11g0346091 Helianthus annuus HOM05D003918 ORTHO05D004494 4.8e-36 154.1 74 91.9
vmacro03250 Vaccinium macrocarpon HOM05D003918 ORTHO05D004494 4.8e-36 154.1 74 90.5
ClCG01G013880 Citrullus lanatus HOM05D003918 ORTHO05D004494 6.3e-36 153.7 74 91.9
Haze_23526 Corylus avellana HOM05D001217 ORTHO05D001097 6.3e-36 153.7 74 91.9
Zm00001eb402980 Zea mays HOM05D003918 ORTHO05D004494 6.3e-36 153.7 74 90.5
CAN.G546.56 Capsicum annuum HOM05D003918 ORTHO05D004494 8.2e-36 153.3 74 90.5
Ciclev10029696m.g Citrus clementina HOM05D003918 ORTHO05D004494 8.2e-36 153.3 74 90.5
Eucgr.J00392 Eucalyptus grandis HOM05D003918 ORTHO05D004494 8.2e-36 153.3 74 90.5
FvH4_3g30520 Fragaria vesca HOM05D003918 ORTHO05D004494 8.2e-36 153.3 74 90.5
FAN11G2739 Fragaria x ananassa HOM05D003918 ORTHO05D004494 8.2e-36 153.3 74 90.5
FAN21G0274 Fragaria x ananassa HOM05D003918 ORTHO05D004494 8.2e-36 153.3 74 90.5
Manes.04G012300 Manihot esculenta HOM05D003918 ORTHO05D004494 8.2e-36 153.3 74 90.5
Manes.11G152900 Manihot esculenta HOM05D003918 ORTHO05D004494 8.2e-36 153.3 74 90.5
Nitab4.5_0000173g0230 Nicotiana tabacum HOM05D003918 ORTHO05D004494 8.2e-36 153.3 74 90.5
Peaxi162Scf00983g00019 Petunia axillaris HOM05D003918 ORTHO05D004494 8.2e-36 153.3 74 90.5
RcHm_v2.0_Chr5g0056481 Rosa chinensis HOM05D003918 ORTHO05D004494 8.2e-36 153.3 74 90.5
Sed0005005 Sechium edule HOM05D003918 ORTHO05D004494 8.2e-36 153.3 74 90.5
Sopen11g026220 Solanum pennellii HOM05D003918 ORTHO05D004494 8.2e-36 153.3 74 90.5
PGSC0003DMG402000458 Solanum tuberosum HOM05D003918 ORTHO05D004494 8.2e-36 153.3 74 90.5
AL4G22250 Arabidopsis lyrata HOM05D003918 ORTHO05D004494 1.1e-35 152.9 74 90.5
Haze_03482 Corylus avellana HOM05D003918 ORTHO05D004494 1.1e-35 152.9 74 90.5
ECA248G3596 Erigeron canadensis HOM05D003918 ORTHO05D004494 1.1e-35 152.9 74 90.5
Oeu008363.1 Olea europaea HOM05D003918 ORTHO05D004494 1.1e-35 152.9 74 90.5
Os03g0146300 Oryza sativa ssp. japonica HOM05D003918 ORTHO05D004494 1.1e-35 152.9 74 90.5
Potri.009G004000 Populus trichocarpa HOM05D003918 ORTHO05D004494 1.1e-35 152.9 74 90.5
PGR119G0927 Punica granatum HOM05D003918 ORTHO05D004494 1.1e-35 152.9 74 90.5
Rhsim01G0210200 Rhododendron simsii HOM05D003918 ORTHO05D004494 1.1e-35 152.9 74 90.5
Sabra09G0001700 Salix brachista HOM05D003918 ORTHO05D004494 1.1e-35 152.9 74 89.2
TAR633G2652 Trochodendron aralioides HOM05D003918 ORTHO05D004494 1.1e-35 152.9 74 90.5
AT2G27960 Arabidopsis thaliana HOM05D003918 ORTHO05D004494 1.4e-35 152.5 74 89.2
CiPaw.14G106800 Carya illinoinensis HOM05D003918 ORTHO05D004494 1.4e-35 152.5 74 90.5
Gohir.A07G105200 Gossypium hirsutum HOM05D003918 ORTHO05D004494 1.4e-35 152.5 74 90.5
Gohir.D07G109300 Gossypium hirsutum HOM05D003918 ORTHO05D004494 1.4e-35 152.5 74 90.5
Gorai.001G117400 Gossypium raimondii HOM05D003918 ORTHO05D004494 1.4e-35 152.5 74 90.5
Psat0ss2518g0280 Pisum sativum HOM05D003918 ORTHO05D004494 1.4e-35 152.5 74 90.5
Actinidia07191 Actinidia chinensis HOM05D001217 ORTHO05D004494 1.8e-35 152.1 74 90.5
Aqoxy1G01058 Aquilegia oxysepala HOM05D003918 ORTHO05D004494 1.8e-35 152.1 74 89.2
ClCG02G021690 Citrullus lanatus HOM05D003918 ORTHO05D004494 1.8e-35 152.1 74 90.5
MELO3C026958.2 Cucumis melo HOM05D003918 ORTHO05D004494 1.8e-35 152.1 74 90.5
Nn2g13876 Nelumbo nucifera HOM05D003918 ORTHO05D004494 1.8e-35 152.1 74 90.5
Hund00834 Selenicereus undatus HOM05D003918 ORTHO05D004494 1.8e-35 152.1 74 90.5
Aa31LG5G8120 Aethionema arabicum HOM05D003918 ORTHO05D004494 2.4e-35 151.8 74 89.2
ATR0043G026 Amborella trichopoda HOM05D003918 ORTHO05D004494 2.4e-35 151.8 78 84.6
HanXRQChr01g0019451 Helianthus annuus HOM05D003918 ORTHO05D004494 2.4e-35 151.8 74 89.2
Lsat_1_v5_gn_1_64981 Lactuca sativa HOM05D003918 ORTHO05D004494 2.4e-35 151.8 74 89.2
Oeu040442.1 Olea europaea HOM05D003918 ORTHO05D004494 2.4e-35 151.8 74 89.2
CAN.G246.3 Capsicum annuum HOM05D003918 ORTHO05D004494 3.1e-35 151.4 74 89.2
CDE09G0194 Ceratophyllum demersum HOM05D003918 ORTHO05D004494 3.1e-35 151.4 74 87.8
Lj1A213T32 Lonicera japonica HOM05D003918 ORTHO05D004494 3.1e-35 151.4 74 89.2
SalBow6G1569 Salvia bowleyana HOM05D003918 ORTHO05D004494 3.1e-35 151.4 74 90.5
THA.LOC104815736 Tarenaya hassleriana HOM05D003918 ORTHO05D004494 3.1e-35 151.4 74 87.8
GSVIVG01031454001 Vitis vinifera HOM05D003918 ORTHO05D004494 3.1e-35 151.4 74 90.5
DCAR_015501 Daucus carota HOM05D003918 ORTHO05D004494 4.1e-35 151.0 74 90.5
Oeu000602.1 Olea europaea HOM05D003918 ORTHO05D004494 4.1e-35 151.0 74 90.5
Oeu007309.2 Olea europaea HOM05D003918 ORTHO05D004494 4.1e-35 151.0 74 90.5
PSO339G4781 Papaver somniferum HOM05D003918 ORTHO05D004494 4.1e-35 151.0 74 89.2
TWI31G0950 Tripterygium wilfordii HOM05D003918 ORTHO05D004494 4.1e-35 151.0 74 90.5
TAR623G0966 Trochodendron aralioides HOM05D003918 ORTHO05D004494 4.1e-35 151.0 74 90.5
ECA233G3711 Erigeron canadensis HOM05D003918 ORTHO05D004494 5.3e-35 150.6 74 87.8
PSO339G2710 Papaver somniferum HOM05D003918 ORTHO05D004494 5.3e-35 150.6 74 87.8
PSO801G0480 Papaver somniferum HOM05D003918 ORTHO05D004494 5.3e-35 150.6 74 87.8
PGR102G3373 Punica granatum HOM05D003918 ORTHO05D004494 5.3e-35 150.6 74 90.5
CARHR120670 Cardamine hirsuta HOM05D003918 ORTHO05D004494 6.9e-35 150.2 74 87.8
EL10Ac9g21015 Beta vulgaris HOM05D003918 ORTHO05D004494 9.1e-35 149.8 74 89.2
Carub.0004s0872 Capsella rubella HOM05D003918 ORTHO05D004494 9.1e-35 149.8 74 89.2
Dinv29385 Davidia involucrata HOM05D003918 ORTHO05D004494 9.1e-35 149.8 74 89.2
Migut.D02301 Erythranthe guttata HOM05D003918 ORTHO05D004494 9.1e-35 149.8 74 89.2
FAN25G0673 Fragaria x ananassa HOM05D003918 ORTHO05D004494 9.1e-35 149.8 74 89.2
TAR369G0366 Trochodendron aralioides HOM05D003918 ORTHO05D004494 9.1e-35 149.8 74 89.2
Lsat_1_v5_gn_6_43541 Lactuca sativa HOM05D003918 ORTHO05D004494 1.2e-34 149.4 74 86.5
THA.LOC104826394 Tarenaya hassleriana HOM05D003918 ORTHO05D004494 1.2e-34 149.4 74 87.8
Cpa.g.sc47.8 Carica papaya HOM05D003918 ORTHO05D004494 1.5e-34 149.1 74 87.8
CsaV3_1G014150 Cucumis sativus L. HOM05D003918 ORTHO05D004494 1.5e-34 149.1 74 89.2
Prupe.6G113800 Prunus persica HOM05D003918 ORTHO05D004494 1.5e-34 149.1 74 89.2
Sed0024739 Sechium edule HOM05D003918 ORTHO05D004494 1.5e-34 149.1 74 89.2
SEGI_17224 Sequoiadendron giganteum HOM05D003918 ORTHO05D004494 1.5e-34 149.1 74 87.8
unitig_899.g14962 Utricularia gibba HOM05D003918 ORTHO05D004494 1.5e-34 149.1 74 89.2
AUR62041324 Chenopodium quinoa HOM05D003918 ORTHO05D004494 2.0e-34 148.7 74 87.8
Lalb_Chr19g0136871 Lupinus albus HOM05D003918 ORTHO05D004494 2.0e-34 148.7 74 89.2
SalBow3G4245 Salvia bowleyana HOM05D003918 ORTHO05D004494 2.0e-34 148.7 76 86.8
PGSC0003DMG400018822 Solanum tuberosum HOM05D003918 ORTHO05D004494 2.6e-34 148.3 74 89.2
Lalb_Chr03g0027731 Lupinus albus HOM05D003918 ORTHO05D004494 3.4e-34 147.9 74 87.8
MD03G1128000 Malus domestica HOM05D003918 ORTHO05D004494 3.4e-34 147.9 74 87.8
MD11G1149400 Malus domestica HOM05D003918 ORTHO05D004494 3.4e-34 147.9 74 87.8
Ah.01g016010 Amaranthus hybridus HOM05D003918 ORTHO05D004494 4.5e-34 147.5 74 87.8
Eucgr.B03920 Eucalyptus grandis HOM05D003918 ORTHO05D004494 5.9e-34 147.1 72 91.7
Pp3c14_11680 Physcomitrium patens HOM05D003918 ORTHO05D004494 5.9e-34 147.1 76 84.2
Pp3c2_6200 Physcomitrium patens HOM05D003918 ORTHO05D004494 5.9e-34 147.1 76 84.2
FAN16G1510 Fragaria x ananassa HOM05D003918 ORTHO05D004494 7.7e-34 146.7 80 83.8
Potri.004G217500 Populus trichocarpa HOM05D003918 ORTHO05D004494 7.7e-34 146.7 74 87.8
SEGI_19027 Sequoiadendron giganteum HOM05D003918 ORTHO05D004494 2.2e-33 145.2 74 83.8
Nitab4.5_0003880g0020 Nicotiana tabacum HOM05D003918 ORTHO05D004494 2.9e-33 144.8 72 88.9
Mapoly0001s0011 Marchantia polymorpha HOM05D003918 ORTHO05D004494 3.8e-33 144.4 74 85.1
Glyma.12G083700 Glycine max HOM05D003918 ORTHO05D004494 3.2e-32 141.4 74 86.5
SMO116G0276 Selaginella moellendorffii HOM05D003918 ORTHO05D004494 3.2e-32 141.4 77 79.2
Zm00001eb003750 Zea mays HOM05D003918 ORTHO05D004494 3.2e-32 141.4 74 81.1
MELO3C004864.2 Cucumis melo HOM05D003918 ORTHO05D004494 4.2e-32 141.0 84 78.6
Hma1.2p1_0772F.1_g215980 Hydrangea macrophylla HOM05D003918 ORTHO05D004494 4.2e-32 141.0 90 74.4
Phvul.011G088400 Phaseolus vulgaris HOM05D003918 ORTHO05D004494 2.1e-31 138.7 74 81.1
Cre03.g180350 Chlamydomonas reinhardtii HOM05D003918 ORTHO05D004494 1.1e-29 132.9 70 80.0
PRCOL_00005401 Prasinoderma coloniale HOM05D003918 ORTHO05D004494 3.3e-29 131.3 70 78.6
MCO11G605 Micromonas commoda HOM05D003918 ORTHO05D004494 7.4e-29 130.2 68 79.4
SMO367G0337 Selaginella moellendorffii HOM05D003918 ORTHO05D004494 1.8e-27 125.6 69 76.8
MBI16_g13165_MAGBIO Magnolia biondii HOM05D003918 ORTHO05D004494 3.1e-27 124.8 87 66.7
CDE02G4651 Ceratophyllum demersum HOM05D003918 ORTHO05D004494 1.6e-26 122.5 74 78.4
Zm00001eb012500 Zea mays HOM05D003918 ORTHO05D004494 5.0e-25 117.5 75 72.0
SEGI_02290 Sequoiadendron giganteum HOM05D003918 ORTHO05D004494 6.5e-25 117.1 57 89.5
CsaV3_6G014430 Cucumis sativus L. HOM05D003918 ORTHO05D004494 7.2e-24 113.6 57 87.7
CBR_g2791 Chara braunii HOM05D003918 ORTHO05D004494 6.1e-23 110.5 57 80.7
MBI11_g44590_MAGBIO Magnolia biondii HOM05D003918 ORTHO05D004494 1.8e-22 109.0 59 81.4
BcaB02g10127 Brassica carinata HOM05D003918 ORTHO05D004494 2.8e-20 101.7 75 62.7
Actinidia24153 Actinidia chinensis HOM05D003918 ORTHO05D004494 6.3e-20 100.5 55 83.6
TPR.G31695 Trifolium pratense HOM05D003918 ORTHO05D004494 1.4e-19 99.4 48 91.7
BcaC05g28675 Brassica carinata HOM05D003918 ORTHO05D004494 8.5e-17 90.1 43 86.0
BolC5t33525H Brassica oleracea HOM05D003918 ORTHO05D004494 8.5e-17 90.1 43 86.0
Actinidia03687 Actinidia chinensis HOM05D003918 ORTHO05D004494 1.6e-15 85.9 44 84.1
ATR0760G002 Amborella trichopoda HOM05D003918 ORTHO05D004494 1.4e-14 82.8 41 85.4
AagrBONN_evm.TU.Sc2ySwM_117.701 Anthoceros agrestis HOM05D005424 ORTHO05D006726 1.2e-13 79.7 46 73.9
Nn6g35195 Nelumbo nucifera HOM05D003918 ORTHO05D004494 5.7e-13 77.4 37 91.9
Migut.N02540 Erythranthe guttata HOM05D003918 ORTHO05D004494 7.5e-13 77.0 47 76.6
SGA_v2.0_scaffold50G18575 Striga asiatica HOM05D003918 ORTHO05D004494 1.7e-12 75.9 53 67.9
Zm00001eb191010 Zea mays HOM05D003918 ORTHO05D004494 2.2e-12 75.5 74 51.4
CSS0049200 Camellia sinensis var. sinensis HOM05D003918 ORTHO05D004494 4.8e-12 74.3 39 82.1
Nn2g10486 Nelumbo nucifera HOM05D003918 ORTHO05D004494 4.8e-12 74.3 37 83.8
Thecc.08G095400 Theobroma cacao HOM05D003918 ORTHO05D004494 7.0e-11 70.5 52 61.5
Ah.03g143830 Amaranthus hybridus HOM05D003918 ORTHO05D004494 1.6e-10 69.3 38 84.2
Gohir.A02G090001 Gossypium hirsutum HOM05D003918 ORTHO05D004494 1.0e-09 66.6 38 78.9
CSS0021242 Camellia sinensis var. sinensis HOM05D003918 ORTHO05D004494 1.3e-09 66.2 38 78.9
Nn1g02037 Nelumbo nucifera HOM05D003918 ORTHO05D004494 1.3e-09 66.2 51 58.8
Nn4g23314 Nelumbo nucifera HOM05D003918 ORTHO05D004494 3.2e-08 61.6 29 86.2
Ah.09g226860 Amaranthus hybridus HOM05D003918 ORTHO05D004494 1.2e-07 59.7 39 74.4
MBI10_g35299_MAGBIO Magnolia biondii HOM05D003918 ORTHO05D004494 5.2e-06 54.3 29 79.3


User provided reference genes

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