Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g27431 Brassica carinata HOM05D000005 ORTHO05D093186 9.3e-71 270.0 128 100.0
BcaB06g27434 Brassica carinata HOM05D000005 ORTHO05D012587 6.2e-51 204.1 99 100.0
BcaB06g27430 Brassica carinata HOM05D000005 ORTHO05D012587 1.6e-46 189.5 99 93.9
C04p46720 Brassica napus HOM05D000005 ORTHO05D012587 3.0e-45 185.3 99 89.9
BolC4t26258H Brassica oleracea HOM05D000005 ORTHO05D012587 3.0e-45 185.3 99 89.9
Sp7g01910 Schrenkiella parvula HOM05D000005 ORTHO05D012587 1.1e-26 123.6 96 65.6
Carub.0007s3556 Capsella rubella HOM05D000005 ORTHO05D012587 7.0e-26 120.9 99 60.6
BcaB06g27427 Brassica carinata HOM05D000005 ORTHO05D012587 1.2e-25 120.2 99 61.6
AT5G40090 Arabidopsis thaliana HOM05D000005 ORTHO05D012587 6.5e-24 114.4 100 60.0
Thhalv10028295m.g Eutrema salsugineum HOM05D000005 ORTHO05D012587 8.0e-22 107.5 95 62.1
Carub.0007s3557 Capsella rubella HOM05D000005 ORTHO05D012587 1.0e-21 107.1 102 53.9
AL7G49920 Arabidopsis lyrata HOM05D000005 ORTHO05D012587 1.8e-21 106.3 100 56.0
AT1G17610 Arabidopsis thaliana HOM05D000005 ORTHO05D012587 7.0e-18 94.4 99 53.5
CARHR018210 Cardamine hirsuta HOM05D000005 ORTHO05D012587 1.2e-17 93.6 99 53.5
AL1G29930 Arabidopsis lyrata HOM05D000005 ORTHO05D012587 7.7e-17 90.9 99 53.5
A09p60270 Brassica napus HOM05D000005 ORTHO05D012587 1.3e-16 90.1 99 53.5
BraA09t41398Z Brassica rapa HOM05D000005 ORTHO05D012587 1.3e-16 90.1 99 53.5
BcaC07g41370 Brassica carinata HOM05D000005 ORTHO05D012587 1.7e-16 89.7 99 52.5
C08p43740 Brassica napus HOM05D000005 ORTHO05D012587 2.9e-16 89.0 99 52.5
BolC8t51921H Brassica oleracea HOM05D000005 ORTHO05D012587 1.5e-07 60.1 48 68.8


User provided reference genes

Program Settings