Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g27060 Brassica carinata HOM05D009696 ORTHO05D014095 2.6e-107 392.1 205 100.0
BcaB06g27059 Brassica carinata HOM05D009696 ORTHO05D000614 4.6e-88 328.2 194 90.2
C04p43960 Brassica napus HOM05D009696 ORTHO05D000614 2.1e-61 239.6 191 70.2
BolC4t25978H Brassica oleracea HOM05D009696 ORTHO05D014095 2.1e-61 239.6 191 70.2
BcaC02g09545 Brassica carinata HOM05D009696 ORTHO05D000614 7.2e-57 224.6 191 67.0
C04p43970 Brassica napus HOM05D009696 ORTHO05D000614 1.3e-55 220.3 192 66.7
BcaC02g09544 Brassica carinata HOM05D009696 ORTHO05D000614 2.2e-53 213.0 195 63.6
BcaC02g09543 Brassica carinata HOM05D009696 ORTHO05D000614 3.7e-53 212.2 182 67.0
A04p10480 Brassica napus HOM05D009696 ORTHO05D000614 1.5e-51 206.8 193 64.2
BraA04t16714Z Brassica rapa HOM05D009696 ORTHO05D014095 1.5e-51 206.8 192 64.6
C04p43940 Brassica napus HOM05D009696 ORTHO05D014095 2.6e-51 206.1 190 62.6
BcaC02g09542 Brassica carinata HOM05D009696 ORTHO05D014095 3.8e-50 202.2 189 60.3
BraA04t16712Z Brassica rapa HOM05D009696 ORTHO05D014095 1.1e-49 200.7 191 60.7
A04p10430 Brassica napus HOM05D009696 ORTHO05D014095 4.2e-49 198.7 174 63.8
BolC4t25976H Brassica oleracea HOM05D009696 ORTHO05D000614 9.4e-49 197.6 177 65.0
BcaB06g27058 Brassica carinata HOM05D009696 ORTHO05D000614 1.2e-48 197.2 182 59.9
BcaB06g27057 Brassica carinata HOM05D009696 ORTHO05D000614 2.1e-48 196.4 192 61.5
BcaC02g09540 Brassica carinata HOM05D009696 ORTHO05D014095 1.1e-46 190.7 190 58.9
A04p10440 Brassica napus HOM05D009696 ORTHO05D014095 5.7e-46 188.3 161 70.2
BcaB07g31262 Brassica carinata HOM05D017697 ORTHO05D014095 1.5e-25 120.6 179 47.5
BcaC02g09464 Brassica carinata HOM05D017697 ORTHO05D014095 9.1e-20 101.3 138 46.4
CARHR216080 Cardamine hirsuta HOM05D009696 ORTHO05D000614 3.4e-14 82.8 192 32.3
Sp2g02820 Schrenkiella parvula HOM05D000538 ORTHO05D000614 3.4e-14 82.8 196 32.7
BcaC06g31859 Brassica carinata HOM05D000538 ORTHO05D000614 2.2e-13 80.1 188 32.4
Thhalv10023503m.g Eutrema salsugineum HOM05D000538 ORTHO05D000614 6.3e-13 78.6 196 32.1
AT1G66420 Arabidopsis thaliana HOM05D000538 ORTHO05D000614 1.1e-12 77.8 174 32.8
Aa31LG2G9100 Aethionema arabicum HOM05D000538 ORTHO05D000614 2.4e-12 76.6 195 33.3
A09p16670 Brassica napus HOM05D000538 ORTHO05D000614 2.4e-12 76.6 190 32.1
BraA09t37306Z Brassica rapa HOM05D000538 ORTHO05D000614 2.4e-12 76.6 190 32.1
BcaB07g31281 Brassica carinata HOM05D000538 ORTHO05D000614 9.2e-12 74.7 190 31.1
BcaC04g22347 Brassica carinata HOM05D000538 ORTHO05D000614 2.7e-11 73.2 169 33.7
C09p20300 Brassica napus HOM05D000538 ORTHO05D000614 2.7e-11 73.2 169 33.7
BolC9t54934H Brassica oleracea HOM05D000538 ORTHO05D000614 2.7e-11 73.2 169 33.7
BcaC02g10543 Brassica carinata HOM05D000538 ORTHO05D000614 3.8e-10 69.3 188 29.8
C04p27660 Brassica napus HOM05D000538 ORTHO05D000614 3.8e-10 69.3 188 29.8
BolC4t24311H Brassica oleracea HOM05D000538 ORTHO05D000614 3.8e-10 69.3 188 29.8
Carub.0002s0334 Capsella rubella HOM05D000538 ORTHO05D000614 6.6e-10 68.6 193 30.6
A03p67190 Brassica napus HOM05D000538 ORTHO05D000614 1.1e-09 67.8 181 26.5
C01p38630 Brassica napus HOM05D009696 ORTHO05D039057 1.1e-09 67.8 101 43.6
BraA01t02756Z Brassica rapa HOM05D000538 ORTHO05D000614 1.1e-09 67.8 181 26.5
C04p43060 Brassica napus HOM05D017697 ORTHO05D014095 1.5e-09 67.4 158 38.0
THA.LOC104809520 Tarenaya hassleriana HOM05D000538 ORTHO05D000614 7.3e-09 65.1 178 32.0
A01p30590 Brassica napus HOM05D000538 ORTHO05D000614 9.5e-09 64.7 176 30.1
BraA01t03191Z Brassica rapa HOM05D000538 ORTHO05D000614 9.5e-09 64.7 176 30.1
AT4G00390 Arabidopsis thaliana HOM05D000538 ORTHO05D000614 2.8e-08 63.2 141 31.2
C08p07930 Brassica napus HOM05D000538 ORTHO05D000614 4.7e-08 62.4 168 32.1
BolC8t47645H Brassica oleracea HOM05D000538 ORTHO05D000614 4.7e-08 62.4 168 32.1
AT1G61730 Arabidopsis thaliana HOM05D000538 ORTHO05D000614 6.1e-08 62.0 183 29.0
AL2G14390 Arabidopsis lyrata HOM05D000538 ORTHO05D000614 1.4e-07 60.8 193 30.1
CARHR050610 Cardamine hirsuta HOM05D000538 ORTHO05D000614 2.3e-07 60.1 194 29.9
BcaC07g37349 Brassica carinata HOM05D000538 ORTHO05D000614 4.0e-07 59.3 161 33.5
BraA01t02698Z Brassica rapa HOM05D000538 ORTHO05D000614 4.0e-07 59.3 150 34.0
Thhalv10028163m.g Eutrema salsugineum HOM05D009696 ORTHO05D000614 4.0e-07 59.3 147 32.0
A04p08610 Brassica napus HOM05D000538 ORTHO05D000614 8.9e-07 58.2 150 34.0
C04p42350 Brassica napus HOM05D000538 ORTHO05D000614 1.2e-06 57.8 187 29.9
CARHR011790 Cardamine hirsuta HOM05D000538 ORTHO05D000614 1.2e-06 57.8 140 30.0
Carub.0001s1112 Capsella rubella HOM05D000538 ORTHO05D000614 2.0e-06 57.0 64 43.8
AL7G49490 Arabidopsis lyrata HOM05D000538 ORTHO05D000614 4.4e-06 55.8 186 29.0
Duzib268G1429 Durio zibethinus HOM05D000538 ORTHO05D000614 4.4e-06 55.8 173 31.8
Sp1g10140 Schrenkiella parvula HOM05D000538 ORTHO05D000614 7.5e-06 55.1 154 29.2
AT4G00250 Arabidopsis thaliana HOM05D000538 ORTHO05D000614 9.8e-06 54.7 159 34.6
BcaB03g16075 Brassica carinata HOM05D000538 ORTHO05D000614 9.8e-06 54.7 102 38.2
A03p67690 Brassica napus HOM05D000538 ORTHO05D000614 9.8e-06 54.7 161 32.3
A03p67700 Brassica napus HOM05D000538 ORTHO05D000614 9.8e-06 54.7 161 32.3
BraA01t02696Z Brassica rapa HOM05D000538 ORTHO05D000614 9.8e-06 54.7 161 32.3
BraA01t02697Z Brassica rapa HOM05D000538 ORTHO05D000614 9.8e-06 54.7 161 32.3


User provided reference genes

Program Settings