Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g26967 Brassica carinata HOM05D001038 ORTHO05D000395 7.0e-68 260.4 122 100.0
BcaC05g28246 Brassica carinata HOM05D001038 ORTHO05D031796 4.9e-29 131.3 108 63.0
C05p42760 Brassica napus HOM05D001038 ORTHO05D031796 6.4e-29 131.0 109 62.4
BcaC09g51573 Brassica carinata HOM05D001038 ORTHO05D000395 4.3e-25 118.2 113 55.8
C09p22250 Brassica napus HOM05D001038 ORTHO05D000395 4.8e-24 114.8 113 54.0
BolC1t03990H Brassica oleracea HOM05D001038 ORTHO05D000395 2.0e-22 109.4 105 55.2
BcaB05g21586 Brassica carinata HOM05D001038 ORTHO05D000395 9.9e-22 107.1 105 53.3
BcaC06g33888 Brassica carinata HOM05D001038 ORTHO05D017617 6.0e-19 97.8 113 50.4
BcaB07g31666 Brassica carinata HOM05D001038 ORTHO05D000395 2.1e-16 89.4 98 50.0
BcaB06g28542 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-15 87.0 93 48.4
BcaC08g43867 Brassica carinata HOM05D001038 ORTHO05D032356 6.9e-15 84.3 70 62.9
C06p12520 Brassica napus HOM05D001038 ORTHO05D032356 6.9e-15 84.3 70 62.9
BolC6t36405H Brassica oleracea HOM05D001038 ORTHO05D032356 6.9e-15 84.3 70 62.9
BcaB08g35558 Brassica carinata HOM05D001038 ORTHO05D000395 9.0e-15 84.0 114 41.2
BolC2t07874H Brassica oleracea HOM05D001038 ORTHO05D010946 1.3e-13 80.1 70 54.3
BolC9t59719H Brassica oleracea HOM05D001038 ORTHO05D032864 6.4e-13 77.8 80 50.0
Thhalv10009967m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 8.4e-13 77.4 112 42.9
BcaC05g27501 Brassica carinata HOM05D001038 ORTHO05D032287 5.4e-12 74.7 70 52.9
BcaB01g01676 Brassica carinata HOM05D002884 ORTHO05D003178 2.1e-11 72.8 61 55.7
C06p26270 Brassica napus HOM05D001038 ORTHO05D017617 7.9e-11 70.9 57 57.9
BolC6t37789H Brassica oleracea HOM05D001038 ORTHO05D039878 7.9e-11 70.9 57 57.9
BcaC01g03929 Brassica carinata HOM05D001038 ORTHO05D010946 1.0e-10 70.5 92 41.3
C05p38680 Brassica napus HOM05D001038 ORTHO05D000395 1.3e-10 70.1 70 51.4
BolC5t32608H Brassica oleracea HOM05D001038 ORTHO05D000395 1.3e-10 70.1 70 51.4
BolC2t08169H Brassica oleracea HOM05D001038 ORTHO05D010946 2.3e-10 69.3 91 41.8
Thhalv10029129m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 2.3e-10 69.3 109 40.4
BcaB07g33657 Brassica carinata HOM05D000428 ORTHO05D000582 3.0e-10 68.9 88 42.0
BcaB05g23741 Brassica carinata HOM05D000373 ORTHO05D000395 5.1e-10 68.2 108 40.7
Thhalv10002173m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 5.1e-10 68.2 104 39.4
BcaC01g05566 Brassica carinata HOM05D023990 ORTHO05D032040 8.7e-10 67.4 91 42.9
BcaB07g32821 Brassica carinata HOM05D001038 ORTHO05D039878 2.5e-09 65.9 61 52.5
BcaB08g34843 Brassica carinata HOM05D001038 ORTHO05D010946 3.3e-09 65.5 87 40.2
BcaB01g02416 Brassica carinata HOM05D011654 ORTHO05D010946 7.4e-09 64.3 99 35.4
BcaB02g11035 Brassica carinata HOM05D001038 ORTHO05D000395 2.8e-08 62.4 87 44.8
C07p60310 Brassica napus HOM05D001038 ORTHO05D000395 4.8e-08 61.6 56 57.1
Thhalv10002975m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 4.8e-08 61.6 104 36.5
BolC3t15494H Brassica oleracea HOM05D001038 ORTHO05D010946 8.1e-08 60.8 90 41.1
BcaC03g14544 Brassica carinata HOM05D001038 ORTHO05D010946 1.1e-07 60.5 86 41.9
BcaB01g00832 Brassica carinata HOM05D001038 ORTHO05D000395 1.4e-07 60.1 114 31.6
BcaB06g28161 Brassica carinata HOM05D001038 ORTHO05D000395 1.4e-07 60.1 98 38.8
BraA05t20300Z Brassica rapa HOM05D001038 ORTHO05D000395 3.1e-07 58.9 107 33.6
BcaB01g02361 Brassica carinata HOM05D001038 ORTHO05D010946 5.3e-07 58.2 50 60.0
BcaC08g45228 Brassica carinata HOM05D001038 ORTHO05D010946 5.3e-07 58.2 92 35.9
C02p31700 Brassica napus HOM05D000311 ORTHO05D000183 5.3e-07 58.2 89 41.6
BcaC08g43120 Brassica carinata HOM05D001038 ORTHO05D032078 1.5e-06 56.6 108 33.3
C06p03930 Brassica napus HOM05D001038 ORTHO05D000395 1.5e-06 56.6 108 33.3
BcaB02g11159 Brassica carinata HOM05D001038 ORTHO05D000395 2.6e-06 55.8 112 35.7
C03p24850 Brassica napus HOM05D023990 ORTHO05D032040 3.4e-06 55.5 53 54.7
BolC3t14873H Brassica oleracea HOM05D023990 ORTHO05D032040 3.4e-06 55.5 53 54.7
BcaB06g27191 Brassica carinata HOM05D001038 ORTHO05D010946 4.5e-06 55.1 59 45.8
C07p15560 Brassica napus HOM05D001038 ORTHO05D000395 4.5e-06 55.1 88 38.6
BcaB08g36238 Brassica carinata HOM05D011654 ORTHO05D010946 5.8e-06 54.7 51 54.9
Thhalv10002771m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 1.0e-05 53.9 60 43.3


User provided reference genes

Program Settings