Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g26930 Brassica carinata HOM05D008427 ORTHO05D010551 4.1e-84 314.7 159 100.0
BcaB03g16229 Brassica carinata HOM05D008427 ORTHO05D010551 3.2e-20 102.4 80 71.2
A03p02740 Brassica napus HOM05D008427 ORTHO05D010551 2.3e-18 96.3 45 97.8
BraA03t09637Z Brassica rapa HOM05D008427 ORTHO05D010551 2.3e-18 96.3 45 97.8
BcaB07g32741 Brassica carinata HOM05D008427 ORTHO05D010551 1.5e-17 93.6 76 68.4
C03p03160 Brassica napus HOM05D008427 ORTHO05D010551 7.3e-17 91.3 45 93.3
BolC3t12861H Brassica oleracea HOM05D008427 ORTHO05D010551 2.8e-16 89.4 45 91.1
AT5G06450 Arabidopsis thaliana HOM05D008427 ORTHO05D010551 7.6e-14 81.3 45 86.7
Carub.0006s0533 Capsella rubella HOM05D008427 ORTHO05D010551 9.9e-14 80.9 46 84.8
AL6G16540 Arabidopsis lyrata HOM05D008427 ORTHO05D010551 1.7e-13 80.1 45 86.7
BcaB03g16113 Brassica carinata HOM05D008427 ORTHO05D095193 2.2e-13 79.7 138 47.8
Aa31LG3G5270 Aethionema arabicum HOM05D008427 ORTHO05D010551 2.9e-13 79.3 46 82.6
Sp6g36410 Schrenkiella parvula HOM05D008427 ORTHO05D010551 2.9e-13 79.3 45 84.4
Sp3g10000 Schrenkiella parvula HOM05D008427 ORTHO05D010551 8.4e-13 77.8 46 78.3
A05p37570 Brassica napus HOM05D008427 ORTHO05D010551 1.1e-12 77.4 46 82.6
BraA05t22555Z Brassica rapa HOM05D008427 ORTHO05D010551 1.1e-12 77.4 46 82.6
Thhalv10021553m.g Eutrema salsugineum HOM05D008427 ORTHO05D010551 1.1e-12 77.4 46 78.3
CARHR206740 Cardamine hirsuta HOM05D008427 ORTHO05D010551 1.4e-12 77.0 45 82.2
BcaC05g29332 Brassica carinata HOM05D008427 ORTHO05D010551 3.2e-12 75.9 46 80.4
AL3G23340 Arabidopsis lyrata HOM05D008427 ORTHO05D010551 4.2e-12 75.5 46 78.3
Aa31sc52G280 Aethionema arabicum HOM05D008427 ORTHO05D010551 7.1e-12 74.7 46 78.3
AT3G11770 Arabidopsis thaliana HOM05D008427 ORTHO05D010551 7.1e-12 74.7 46 78.3
BcaB06g25585 Brassica carinata HOM05D008427 ORTHO05D010551 7.1e-12 74.7 46 78.3
BolC1t05289H Brassica oleracea HOM05D008427 ORTHO05D010551 7.1e-12 74.7 46 80.4
BcaC09g48194 Brassica carinata HOM05D008427 ORTHO05D010551 9.3e-12 74.3 46 80.4
THA.LOC104826796 Tarenaya hassleriana HOM05D008427 ORTHO05D010551 9.3e-12 74.3 43 86.0
THA.LOC104816634 Tarenaya hassleriana HOM05D008427 ORTHO05D010551 1.2e-11 73.9 62 59.7
C05p56140 Brassica napus HOM05D008427 ORTHO05D010551 1.6e-11 73.6 66 60.6
BolC5t34280H Brassica oleracea HOM05D008427 ORTHO05D010551 1.6e-11 73.6 66 60.6
CARHR086320 Cardamine hirsuta HOM05D008427 ORTHO05D010551 1.6e-11 73.6 45 77.8
BraA01t04160Z Brassica rapa HOM05D008427 ORTHO05D010551 4.6e-11 72.0 46 78.3
BcaB04g21117 Brassica carinata HOM05D008427 ORTHO05D010551 1.7e-10 70.1 46 71.7
Carub.0003s1111 Capsella rubella HOM05D008427 ORTHO05D010551 1.7e-10 70.1 46 73.9
Aa31sc52G270 Aethionema arabicum HOM05D008427 ORTHO05D010551 1.6e-08 63.5 45 68.9
THA.LOC104816633 Tarenaya hassleriana HOM05D008427 ORTHO05D010551 3.6e-08 62.4 63 57.1
THA.LOC104816632 Tarenaya hassleriana HOM05D008427 ORTHO05D010551 6.2e-08 61.6 45 66.7
BcaB01g05993 Brassica carinata HOM05D008427 ORTHO05D010551 1.2e-06 57.4 27 100.0


User provided reference genes

Program Settings